EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000009846 (Gene tree)
Gene ID: 111233351
Gene Symbol: ovol1a
Alias: ovol1|sb:cb956|zgc:171804
Full Name: transcription factor Ovo-like 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7339 bases
Position: chrBDQW01000388.1:47152-54490
Accession: 111233351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000013551	zf-C2H2	PF00096.26	1.7e-15	1	2
ENSSDUP00000013551	zf-C2H2	PF00096.26	1.7e-15	2	2
ENSSDUP00000013551	zf-met	PF12874.7	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013796	-	2248	XM_022761152	ENSSDUP00000013551	354 (aa)	XP_022616873	UPI000BBE805B

Gene Model

Click here to download ENSSDUG00000009846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000009846	ovol1a	60	43.902	ENSSDUG00000000946	-	88	41.558
ENSSDUG00000009846	ovol1a	51	44.872	ENSSDUG00000000799	-	61	44.872
ENSSDUG00000009846	ovol1a	61	35.714	ENSSDUG00000000695	-	61	38.824
ENSSDUG00000009846	ovol1a	58	39.024	ENSSDUG00000015191	-	86	40.244
ENSSDUG00000009846	ovol1a	55	38.298	ENSSDUG00000022914	-	55	38.298
ENSSDUG00000009846	ovol1a	54	39.370	ENSSDUG00000002195	-	95	35.849
ENSSDUG00000009846	ovol1a	51	40.000	ENSSDUG00000023764	-	89	35.000
ENSSDUG00000009846	ovol1a	55	34.746	ENSSDUG00000006426	-	85	41.270
ENSSDUG00000009846	ovol1a	55	35.652	ENSSDUG00000009421	-	74	44.444
ENSSDUG00000009846	ovol1a	71	36.522	ENSSDUG00000015013	-	59	38.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009846	ovol1a	99	55.647	ENSAMXG00000011046	ovol1a	99	54.372	Astyanax_mexicanus
ENSSDUG00000009846	ovol1a	91	42.769	ENSAMXG00000041879	ovol1b	88	43.182	Astyanax_mexicanus
ENSSDUG00000009846	ovol1a	90	46.177	ENSDARG00000078256	ovol1b	90	48.208	Danio_rerio
ENSSDUG00000009846	ovol1a	99	54.795	ENSDARG00000076472	ovol1a	100	53.134	Danio_rerio
ENSSDUG00000009846	ovol1a	100	59.843	ENSELUG00000000343	ovol1a	100	59.259	Esox_lucius
ENSSDUG00000009846	ovol1a	100	73.164	ENSFHEG00000002773	-	100	73.446	Fundulus_heteroclitus
ENSSDUG00000009846	ovol1a	81	73.478	ENSGACG00000018794	ovol1a	100	73.094	Gasterosteus_aculeatus
ENSSDUG00000009846	ovol1a	100	68.644	ENSHCOG00000015860	ovol1a	100	67.797	Hippocampus_comes
ENSSDUG00000009846	ovol1a	100	72.599	ENSKMAG00000002605	-	100	74.011	Kryptolebias_marmoratus
ENSSDUG00000009846	ovol1a	100	79.944	ENSMAMG00000009768	ovol1a	100	78.814	Mastacembelus_armatus
ENSSDUG00000009846	ovol1a	100	78.814	ENSMALG00000008421	ovol1a	100	76.836	Monopterus_albus
ENSSDUG00000009846	ovol1a	100	55.618	ENSPKIG00000024718	ovol1a	85	59.283	Paramormyrops_kingsleyae
ENSSDUG00000009846	ovol1a	100	73.315	ENSPFOG00000008841	-	90	100.000	Poecilia_formosa
ENSSDUG00000009846	ovol1a	100	55.342	ENSPNAG00000020630	ovol1a	100	52.419	Pygocentrus_nattereri
ENSSDUG00000009846	ovol1a	89	41.640	ENSPNAG00000016198	ovol1b	94	42.345	Pygocentrus_nattereri
ENSSDUG00000009846	ovol1a	66	57.328	ENSXCOG00000006461	-	78	57.328	Xiphophorus_couchianus