EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000009957 (Gene tree)
Gene ID: 111216345
Gene Symbol: ino80
Alias: si:ch211-244p18.3
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 37161 bases
Position: chrBDQW01000025.1:9398921-9436081
Accession: 111216345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000013707	ResIII	PF04851.15	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000013958	-	6473	XM_022737848	ENSSDUP00000013707	1573 (aa)	XP_022593569	UPI000BBE514D

Gene Model

Click here to download ENSSDUG00000009957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000009957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000009957	ino80	100	73.304	ENSG00000128908	INO80	90	83.708	Homo_sapiens
ENSSDUG00000009957	ino80	73	88.609	ENSAPOG00000012586	ino80	99	88.522	Acanthochromis_polyacanthus
ENSSDUG00000009957	ino80	99	73.333	ENSAMEG00000016796	INO80	98	73.852	Ailuropoda_melanoleuca
ENSSDUG00000009957	ino80	91	89.191	ENSACIG00000001918	ino80	95	89.191	Amphilophus_citrinellus
ENSSDUG00000009957	ino80	99	94.366	ENSAOCG00000000490	ino80	99	94.366	Amphiprion_ocellaris
ENSSDUG00000009957	ino80	99	94.430	ENSAPEG00000022911	ino80	99	94.430	Amphiprion_percula
ENSSDUG00000009957	ino80	99	93.918	ENSATEG00000001271	ino80	99	93.918	Anabas_testudineus
ENSSDUG00000009957	ino80	100	74.309	ENSAPLG00000013656	INO80	98	74.426	Anas_platyrhynchos
ENSSDUG00000009957	ino80	91	73.811	ENSACAG00000003531	INO80	99	73.979	Anolis_carolinensis
ENSSDUG00000009957	ino80	99	72.864	ENSANAG00000032223	INO80	98	73.282	Aotus_nancymaae
ENSSDUG00000009957	ino80	92	87.994	ENSACLG00000006610	ino80	96	88.064	Astatotilapia_calliptera
ENSSDUG00000009957	ino80	99	72.778	ENSBTAG00000010380	INO80	98	73.554	Bos_taurus
ENSSDUG00000009957	ino80	99	73.099	ENSCJAG00000020770	-	98	73.393	Callithrix_jacchus
ENSSDUG00000009957	ino80	99	73.002	ENSCAFG00000009492	INO80	98	73.708	Canis_familiaris
ENSSDUG00000009957	ino80	70	71.097	ENSCAFG00020005524	-	98	71.085	Canis_lupus_dingo
ENSSDUG00000009957	ino80	99	73.007	ENSCHIG00000010246	INO80	98	73.597	Capra_hircus
ENSSDUG00000009957	ino80	99	73.476	ENSTSYG00000003252	INO80	98	74.010	Carlito_syrichta
ENSSDUG00000009957	ino80	99	73.002	ENSCPOG00000011386	INO80	99	73.367	Cavia_porcellus
ENSSDUG00000009957	ino80	99	72.836	ENSCCAG00000030680	INO80	98	73.329	Cebus_capucinus
ENSSDUG00000009957	ino80	100	73.041	ENSCATG00000040663	INO80	98	73.644	Cercocebus_atys
ENSSDUG00000009957	ino80	99	73.464	ENSCLAG00000008397	INO80	99	73.822	Chinchilla_lanigera
ENSSDUG00000009957	ino80	100	73.103	ENSCSAG00000007632	INO80	98	73.708	Chlorocebus_sabaeus
ENSSDUG00000009957	ino80	63	76.855	ENSCHOG00000011938	INO80	77	76.855	Choloepus_hoffmanni
ENSSDUG00000009957	ino80	97	75.440	ENSCPBG00000013491	INO80	98	74.251	Chrysemys_picta_bellii
ENSSDUG00000009957	ino80	100	68.825	ENSCANG00000036208	INO80	98	69.157	Colobus_angolensis_palliatus
ENSSDUG00000009957	ino80	99	72.767	ENSCGRG00001013566	Ino80	98	73.930	Cricetulus_griseus_chok1gshd
ENSSDUG00000009957	ino80	99	72.767	ENSCGRG00000001290	Ino80	98	73.930	Cricetulus_griseus_crigri
ENSSDUG00000009957	ino80	92	85.213	ENSCSEG00000019370	ino80	96	85.213	Cynoglossus_semilaevis
ENSSDUG00000009957	ino80	98	89.429	ENSCVAG00000021470	ino80	99	89.117	Cyprinodon_variegatus
ENSSDUG00000009957	ino80	100	80.832	ENSDARG00000070432	ino80	98	80.968	Danio_rerio
ENSSDUG00000009957	ino80	99	73.664	ENSDNOG00000010267	INO80	98	74.202	Dasypus_novemcinctus
ENSSDUG00000009957	ino80	61	64.685	ENSEBUG00000001921	ino80	82	71.717	Eptatretus_burgeri
ENSSDUG00000009957	ino80	99	73.208	ENSEASG00005016405	INO80	98	73.724	Equus_asinus_asinus
ENSSDUG00000009957	ino80	91	79.764	ENSELUG00000001071	ino80	94	79.750	Esox_lucius
ENSSDUG00000009957	ino80	99	73.224	ENSFCAG00000014722	INO80	98	73.788	Felis_catus
ENSSDUG00000009957	ino80	100	73.823	ENSFALG00000006125	INO80	99	73.624	Ficedula_albicollis
ENSSDUG00000009957	ino80	99	72.830	ENSFDAG00000005624	INO80	98	73.899	Fukomys_damarensis
ENSSDUG00000009957	ino80	61	88.644	ENSFHEG00000020436	ino80	88	88.181	Fundulus_heteroclitus
ENSSDUG00000009957	ino80	87	84.158	ENSGMOG00000006031	ino80	99	84.158	Gadus_morhua
ENSSDUG00000009957	ino80	100	73.807	ENSGALG00000008553	INO80	99	73.515	Gallus_gallus
ENSSDUG00000009957	ino80	99	88.690	ENSGAFG00000006358	ino80	99	89.010	Gambusia_affinis
ENSSDUG00000009957	ino80	99	90.163	ENSGACG00000012960	ino80	99	89.850	Gasterosteus_aculeatus
ENSSDUG00000009957	ino80	94	74.815	ENSGAGG00000019203	INO80	94	75.172	Gopherus_agassizii
ENSSDUG00000009957	ino80	94	90.589	ENSHBUG00000022614	ino80	96	90.582	Haplochromis_burtoni
ENSSDUG00000009957	ino80	99	73.111	ENSHGLG00000018136	INO80	98	73.627	Heterocephalus_glaber_female
ENSSDUG00000009957	ino80	99	72.544	ENSHGLG00100006571	INO80	99	72.704	Heterocephalus_glaber_male
ENSSDUG00000009957	ino80	99	85.996	ENSHCOG00000002445	ino80	99	86.358	Hippocampus_comes
ENSSDUG00000009957	ino80	94	81.036	ENSIPUG00000018905	ino80	95	82.231	Ictalurus_punctatus
ENSSDUG00000009957	ino80	99	72.927	ENSSTOG00000000427	INO80	99	73.418	Ictidomys_tridecemlineatus
ENSSDUG00000009957	ino80	99	68.644	ENSJJAG00000016166	Ino80	98	68.974	Jaculus_jaculus
ENSSDUG00000009957	ino80	91	85.823	ENSKMAG00000019273	ino80	94	85.962	Kryptolebias_marmoratus
ENSSDUG00000009957	ino80	92	89.320	ENSLBEG00000024288	ino80	95	88.377	Labrus_bergylta
ENSSDUG00000009957	ino80	98	68.849	ENSLACG00000008666	INO80	99	67.832	Latimeria_chalumnae
ENSSDUG00000009957	ino80	99	80.051	ENSLOCG00000012304	ino80	97	80.541	Lepisosteus_oculatus
ENSSDUG00000009957	ino80	99	73.396	ENSLAFG00000009951	INO80	98	73.930	Loxodonta_africana
ENSSDUG00000009957	ino80	100	73.103	ENSMFAG00000044488	INO80	98	73.708	Macaca_fascicularis
ENSSDUG00000009957	ino80	100	73.103	ENSMMUG00000001737	INO80	98	73.708	Macaca_mulatta
ENSSDUG00000009957	ino80	100	73.367	ENSMNEG00000034906	INO80	98	73.772	Macaca_nemestrina
ENSSDUG00000009957	ino80	100	73.103	ENSMLEG00000042117	INO80	98	73.708	Mandrillus_leucophaeus
ENSSDUG00000009957	ino80	71	80.769	ENSMAMG00000013786	ino80	99	80.590	Mastacembelus_armatus
ENSSDUG00000009957	ino80	92	91.066	ENSMZEG00005013146	ino80	96	91.136	Maylandia_zebra
ENSSDUG00000009957	ino80	84	75.880	ENSMGAG00000011164	INO80	99	75.561	Meleagris_gallopavo
ENSSDUG00000009957	ino80	99	71.447	ENSMAUG00000020670	Ino80	98	72.907	Mesocricetus_auratus
ENSSDUG00000009957	ino80	99	73.048	ENSMICG00000005801	INO80	99	72.958	Microcebus_murinus
ENSSDUG00000009957	ino80	99	72.830	ENSMOCG00000016879	Ino80	98	73.994	Microtus_ochrogaster
ENSSDUG00000009957	ino80	71	80.413	ENSMMOG00000015046	ino80	99	79.964	Mola_mola
ENSSDUG00000009957	ino80	99	73.754	ENSMODG00000000184	INO80	98	74.121	Monodelphis_domestica
ENSSDUG00000009957	ino80	91	88.191	ENSMALG00000016488	ino80	94	88.191	Monopterus_albus
ENSSDUG00000009957	ino80	99	70.723	MGP_CAROLIEiJ_G0024144	Ino80	98	72.146	Mus_caroli
ENSSDUG00000009957	ino80	99	72.704	ENSMUSG00000034154	Ino80	98	74.185	Mus_musculus
ENSSDUG00000009957	ino80	99	72.516	MGP_PahariEiJ_G0025587	Ino80	98	73.802	Mus_pahari
ENSSDUG00000009957	ino80	99	72.767	MGP_SPRETEiJ_G0025060	Ino80	98	74.185	Mus_spretus
ENSSDUG00000009957	ino80	99	73.333	ENSMPUG00000008786	INO80	98	73.916	Mustela_putorius_furo
ENSSDUG00000009957	ino80	99	73.012	ENSMLUG00000017764	INO80	98	73.333	Myotis_lucifugus
ENSSDUG00000009957	ino80	99	72.756	ENSNGAG00000019497	Ino80	98	73.724	Nannospalax_galili
ENSSDUG00000009957	ino80	91	84.535	ENSNBRG00000022086	ino80	95	84.605	Neolamprologus_brichardi
ENSSDUG00000009957	ino80	100	71.644	ENSNLEG00000003454	INO80	98	71.883	Nomascus_leucogenys
ENSSDUG00000009957	ino80	70	71.429	ENSOPRG00000000831	INO80	75	69.767	Ochotona_princeps
ENSSDUG00000009957	ino80	99	73.228	ENSODEG00000016734	INO80	99	73.647	Octodon_degus
ENSSDUG00000009957	ino80	99	93.534	ENSONIG00000000772	ino80	99	93.534	Oreochromis_niloticus
ENSSDUG00000009957	ino80	99	73.539	ENSOCUG00000010763	INO80	98	74.074	Oryctolagus_cuniculus
ENSSDUG00000009957	ino80	99	84.733	ENSORLG00000018028	ino80	99	85.594	Oryzias_latipes
ENSSDUG00000009957	ino80	99	84.987	ENSORLG00015012507	ino80	99	85.788	Oryzias_latipes_hsok
ENSSDUG00000009957	ino80	99	85.814	ENSOMEG00000003791	ino80	99	86.194	Oryzias_melastigma
ENSSDUG00000009957	ino80	99	73.711	ENSOGAG00000008998	INO80	98	74.121	Otolemur_garnettii
ENSSDUG00000009957	ino80	99	72.574	ENSOARG00000020323	INO80	98	73.410	Ovis_aries
ENSSDUG00000009957	ino80	100	73.166	ENSPPAG00000042104	INO80	98	73.631	Pan_paniscus
ENSSDUG00000009957	ino80	99	73.208	ENSPPRG00000011011	INO80	98	73.788	Panthera_pardus
ENSSDUG00000009957	ino80	99	72.956	ENSPTIG00000005911	INO80	98	73.533	Panthera_tigris_altaica
ENSSDUG00000009957	ino80	100	73.166	ENSPTRG00000006939	INO80	98	73.631	Pan_troglodytes
ENSSDUG00000009957	ino80	100	73.103	ENSPANG00000019131	INO80	98	73.708	Papio_anubis
ENSSDUG00000009957	ino80	91	80.280	ENSPKIG00000021450	ino80	99	79.648	Paramormyrops_kingsleyae
ENSSDUG00000009957	ino80	97	75.195	ENSPSIG00000014403	INO80	97	75.016	Pelodiscus_sinensis
ENSSDUG00000009957	ino80	73	70.769	ENSPEMG00000013114	-	100	71.453	Peromyscus_maniculatus_bairdii
ENSSDUG00000009957	ino80	99	73.943	ENSPCIG00000027848	INO80	98	74.313	Phascolarctos_cinereus
ENSSDUG00000009957	ino80	98	87.444	ENSPFOG00000013082	ino80	99	87.292	Poecilia_formosa
ENSSDUG00000009957	ino80	60	85.896	ENSPMEG00000021422	ino80	87	85.896	Poecilia_mexicana
ENSSDUG00000009957	ino80	94	87.788	ENSPREG00000013650	ino80	94	88.075	Poecilia_reticulata
ENSSDUG00000009957	ino80	99	71.592	ENSPPYG00000006368	INO80	98	71.979	Pongo_abelii
ENSSDUG00000009957	ino80	99	72.275	ENSPCOG00000022332	INO80	98	72.588	Propithecus_coquereli
ENSSDUG00000009957	ino80	99	70.896	ENSPVAG00000001852	INO80	98	71.831	Pteropus_vampyrus
ENSSDUG00000009957	ino80	92	87.083	ENSPNYG00000002995	ino80	95	87.222	Pundamilia_nyererei
ENSSDUG00000009957	ino80	100	81.853	ENSPNAG00000010386	ino80	98	81.638	Pygocentrus_nattereri
ENSSDUG00000009957	ino80	99	72.264	ENSRNOG00000014483	Ino80	98	73.738	Rattus_norvegicus
ENSSDUG00000009957	ino80	100	73.367	ENSRBIG00000031765	INO80	98	73.708	Rhinopithecus_bieti
ENSSDUG00000009957	ino80	100	73.367	ENSRROG00000033143	INO80	98	73.708	Rhinopithecus_roxellana
ENSSDUG00000009957	ino80	97	74.390	ENSSBOG00000023493	INO80	98	75.186	Saimiri_boliviensis_boliviensis
ENSSDUG00000009957	ino80	99	73.754	ENSSHAG00000016349	INO80	98	74.121	Sarcophilus_harrisii
ENSSDUG00000009957	ino80	97	80.481	ENSSFOG00015000183	ino80	99	80.286	Scleropages_formosus
ENSSDUG00000009957	ino80	99	94.707	ENSSMAG00000007221	ino80	99	94.707	Scophthalmus_maximus
ENSSDUG00000009957	ino80	100	97.395	ENSSLDG00000000389	ino80	100	97.395	Seriola_lalandi_dorsalis
ENSSDUG00000009957	ino80	99	70.440	ENSSARG00000007876	INO80	98	71.046	Sorex_araneus
ENSSDUG00000009957	ino80	92	88.211	ENSSPAG00000007779	ino80	94	88.333	Stegastes_partitus
ENSSDUG00000009957	ino80	99	72.853	ENSSSCG00000004753	INO80	98	74.161	Sus_scrofa
ENSSDUG00000009957	ino80	100	73.463	ENSTGUG00000010786	INO80	97	74.339	Taeniopygia_guttata
ENSSDUG00000009957	ino80	94	89.885	ENSTRUG00000013026	ino80	95	89.722	Takifugu_rubripes
ENSSDUG00000009957	ino80	99	72.121	ENSTTRG00000011479	INO80	98	72.634	Tursiops_truncatus
ENSSDUG00000009957	ino80	73	71.220	ENSUMAG00000012190	-	99	71.123	Ursus_maritimus
ENSSDUG00000009957	ino80	99	68.093	ENSVPAG00000002838	INO80	98	68.286	Vicugna_pacos
ENSSDUG00000009957	ino80	99	73.128	ENSVVUG00000026698	INO80	98	73.835	Vulpes_vulpes
ENSSDUG00000009957	ino80	97	65.738	ENSXETG00000034272	INO80	97	65.653	Xenopus_tropicalis
ENSSDUG00000009957	ino80	94	88.128	ENSXMAG00000006742	ino80	93	88.145	Xiphophorus_maculatus