EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000010293 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 23218 bases
Position: chrBDQW01000169.1:2737219-2760436
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014123	MMR_HSR1	PF01926.23	3.9e-06	1	1
ENSSDUP00000014151	MMR_HSR1	PF01926.23	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000014392	-	2208	-	ENSSDUP00000014123	626 (aa)	-	-
ENSSDUT00000014420	-	2208	-	ENSSDUP00000014151	626 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000010293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010293	-	69	30.269	ENSG00000189233	NUGGC	53	30.269	Homo_sapiens
ENSSDUG00000010293	-	99	65.094	ENSAPEG00000007463	-	90	65.094	Amphiprion_percula
ENSSDUG00000010293	-	99	59.547	ENSAPEG00000008962	-	72	59.547	Amphiprion_percula
ENSSDUG00000010293	-	99	59.871	ENSAPEG00000007405	-	72	59.871	Amphiprion_percula
ENSSDUG00000010293	-	77	67.635	ENSATEG00000024350	-	67	67.635	Anabas_testudineus
ENSSDUG00000010293	-	86	61.101	ENSACLG00000027763	-	67	61.101	Astatotilapia_calliptera
ENSSDUG00000010293	-	84	55.682	ENSACLG00000027785	-	82	55.871	Astatotilapia_calliptera
ENSSDUG00000010293	-	99	61.675	ENSACLG00000027781	-	71	61.675	Astatotilapia_calliptera
ENSSDUG00000010293	-	85	55.993	ENSACLG00000009378	-	96	56.098	Astatotilapia_calliptera
ENSSDUG00000010293	-	85	62.243	ENSACLG00000027770	-	66	62.243	Astatotilapia_calliptera
ENSSDUG00000010293	-	99	58.776	ENSACLG00000027743	-	69	59.259	Astatotilapia_calliptera
ENSSDUG00000010293	-	76	56.604	ENSACLG00000027749	-	64	57.082	Astatotilapia_calliptera
ENSSDUG00000010293	-	82	36.643	ENSAMXG00000007315	-	69	36.643	Astyanax_mexicanus
ENSSDUG00000010293	-	76	39.370	ENSAMXG00000035650	-	67	39.370	Astyanax_mexicanus
ENSSDUG00000010293	-	69	30.045	ENSBTAG00000011321	NUGGC	51	32.412	Bos_taurus
ENSSDUG00000010293	-	69	30.269	ENSCAPG00000010505	NUGGC	54	30.269	Cavia_aperea
ENSSDUG00000010293	-	69	30.787	ENSCPOG00000003741	NUGGC	53	30.787	Cavia_porcellus
ENSSDUG00000010293	-	69	30.269	ENSCATG00000011556	NUGGC	53	30.269	Cercocebus_atys
ENSSDUG00000010293	-	69	30.337	ENSEASG00005016323	NUGGC	55	30.337	Equus_asinus_asinus
ENSSDUG00000010293	-	99	43.302	ENSELUG00000016324	-	72	42.679	Esox_lucius
ENSSDUG00000010293	-	99	41.176	ENSELUG00000016238	-	75	41.765	Esox_lucius
ENSSDUG00000010293	-	74	47.346	ENSELUG00000016154	-	51	47.368	Esox_lucius
ENSSDUG00000010293	-	69	30.562	ENSFCAG00000002892	NUGGC	53	30.562	Felis_catus
ENSSDUG00000010293	-	99	57.827	ENSGACG00000011412	-	92	57.827	Gasterosteus_aculeatus
ENSSDUG00000010293	-	78	63.951	ENSLBEG00000025738	-	77	63.951	Labrus_bergylta
ENSSDUG00000010293	-	81	50.851	ENSLBEG00000027088	-	72	51.229	Labrus_bergylta
ENSSDUG00000010293	-	72	35.065	ENSLOCG00000002868	-	63	35.065	Lepisosteus_oculatus
ENSSDUG00000010293	-	69	30.493	ENSMFAG00000043857	NUGGC	53	30.493	Macaca_fascicularis
ENSSDUG00000010293	-	69	30.045	ENSMMUG00000001040	NUGGC	53	30.045	Macaca_mulatta
ENSSDUG00000010293	-	71	30.197	ENSMNEG00000045452	NUGGC	53	30.493	Macaca_nemestrina
ENSSDUG00000010293	-	51	79.167	ENSMAMG00000023343	-	62	64.411	Mastacembelus_armatus
ENSSDUG00000010293	-	99	58.776	ENSMZEG00005023374	-	66	62.313	Maylandia_zebra
ENSSDUG00000010293	-	84	55.598	ENSMZEG00005004202	-	67	55.703	Maylandia_zebra
ENSSDUG00000010293	-	99	61.897	ENSMZEG00005004230	-	70	62.379	Maylandia_zebra
ENSSDUG00000010293	-	77	56.674	ENSMZEG00005026592	-	66	56.818	Maylandia_zebra
ENSSDUG00000010293	-	89	60.320	ENSMZEG00005023434	-	61	60.320	Maylandia_zebra
ENSSDUG00000010293	-	77	55.901	ENSMZEG00005023437	-	66	55.967	Maylandia_zebra
ENSSDUG00000010293	-	98	55.309	ENSMZEG00005023384	-	72	55.309	Maylandia_zebra
ENSSDUG00000010293	-	69	30.000	MGP_CAROLIEiJ_G0019426	Nuggc	53	30.000	Mus_caroli
ENSSDUG00000010293	-	69	30.337	ENSNGAG00000022052	Nuggc	53	30.337	Nannospalax_galili
ENSSDUG00000010293	-	71	54.565	ENSONIG00000015367	-	70	54.565	Oreochromis_niloticus
ENSSDUG00000010293	-	74	57.783	ENSONIG00000017112	-	71	57.783	Oreochromis_niloticus
ENSSDUG00000010293	-	71	53.097	ENSONIG00000012332	-	70	53.097	Oreochromis_niloticus
ENSSDUG00000010293	-	99	53.698	ENSONIG00000005156	-	72	55.699	Oreochromis_niloticus
ENSSDUG00000010293	-	69	30.493	ENSPPRG00000012192	NUGGC	53	30.493	Panthera_pardus
ENSSDUG00000010293	-	69	30.493	ENSPTIG00000008187	NUGGC	53	30.493	Panthera_tigris_altaica
ENSSDUG00000010293	-	99	52.894	ENSPFOG00000006073	-	73	53.291	Poecilia_formosa
ENSSDUG00000010293	-	99	53.249	ENSPLAG00000016480	-	73	53.333	Poecilia_latipinna
ENSSDUG00000010293	-	71	56.863	ENSPMEG00000014636	-	66	56.926	Poecilia_mexicana
ENSSDUG00000010293	-	79	58.717	ENSPREG00000007347	-	82	59.719	Poecilia_reticulata
ENSSDUG00000010293	-	99	56.913	ENSPREG00000009634	-	92	57.303	Poecilia_reticulata
ENSSDUG00000010293	-	86	62.018	ENSPNYG00000002532	-	66	62.018	Pundamilia_nyererei
ENSSDUG00000010293	-	78	35.769	ENSPNAG00000003204	-	65	35.769	Pygocentrus_nattereri
ENSSDUG00000010293	-	80	33.935	ENSSFOG00015023994	-	55	34.116	Scleropages_formosus
ENSSDUG00000010293	-	99	62.717	ENSSMAG00000015947	nuggc.3	73	63.191	Scophthalmus_maximus
ENSSDUG00000010293	-	99	64.771	ENSSPAG00000014020	-	77	64.929	Stegastes_partitus
ENSSDUG00000010293	-	85	51.423	ENSSPAG00000013498	-	69	52.717	Stegastes_partitus