EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000010305 (Gene tree)
Gene ID: 111236874
Gene Symbol: -
Alias: -
Full Name: endothelial zinc finger protein induced by tumor necrosis factor alpha-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5239 bases
Position: chrBDQW01000741.1:305585-310823
Accession: 111236874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014146	zf-C2H2	PF00096.26	1.1e-29	1	5
ENSSDUP00000014146	zf-C2H2	PF00096.26	1.1e-29	2	5
ENSSDUP00000014146	zf-C2H2	PF00096.26	1.1e-29	3	5
ENSSDUP00000014146	zf-C2H2	PF00096.26	1.1e-29	4	5
ENSSDUP00000014146	zf-C2H2	PF00096.26	1.1e-29	5	5
ENSSDUP00000014146	zf-met	PF12874.7	2.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000014415	-	2614	XM_022765772	ENSSDUP00000014146	667 (aa)	XP_022621493	UPI000BBF3517

Gene Model

Click here to download ENSSDUG00000010305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000010305	-	58	36.123	ENSSDUG00000009421	-	80	36.123
ENSSDUG00000010305	-	66	42.169	ENSSDUG00000021415	si:ch211-216l23.1	71	42.169
ENSSDUG00000010305	-	62	38.542	ENSSDUG00000004089	-	97	35.821
ENSSDUG00000010305	-	74	32.692	ENSSDUG00000006740	-	85	40.000
ENSSDUG00000010305	-	64	34.586	ENSSDUG00000009425	-	55	42.857
ENSSDUG00000010305	-	58	36.694	ENSSDUG00000015204	-	89	36.694
ENSSDUG00000010305	-	57	38.372	ENSSDUG00000002195	-	98	37.634
ENSSDUG00000010305	-	57	45.283	ENSSDUG00000009534	-	67	34.409
ENSSDUG00000010305	-	58	31.285	ENSSDUG00000012926	-	66	37.273
ENSSDUG00000010305	-	60	33.784	ENSSDUG00000000786	-	95	46.512
ENSSDUG00000010305	-	61	31.790	ENSSDUG00000000705	-	64	31.790
ENSSDUG00000010305	-	69	31.906	ENSSDUG00000008943	-	92	32.843
ENSSDUG00000010305	-	57	33.684	ENSSDUG00000003003	znf319b	81	33.684
ENSSDUG00000010305	-	57	43.750	ENSSDUG00000008682	-	90	43.750
ENSSDUG00000010305	-	57	34.524	ENSSDUG00000007752	scrt1b	55	34.524
ENSSDUG00000010305	-	67	32.812	ENSSDUG00000020595	-	83	32.852
ENSSDUG00000010305	-	58	34.894	ENSSDUG00000020805	-	78	35.043
ENSSDUG00000010305	-	59	35.780	ENSSDUG00000001263	-	90	35.780
ENSSDUG00000010305	-	71	32.576	ENSSDUG00000000946	-	92	40.741
ENSSDUG00000010305	-	54	35.616	ENSSDUG00000015254	-	88	33.129
ENSSDUG00000010305	-	66	32.822	ENSSDUG00000015013	-	63	34.270
ENSSDUG00000010305	-	68	32.022	ENSSDUG00000016734	-	69	32.022
ENSSDUG00000010305	-	59	33.540	ENSSDUG00000015191	-	85	32.014
ENSSDUG00000010305	-	58	35.000	ENSSDUG00000022035	-	53	37.037
ENSSDUG00000010305	-	70	32.123	ENSSDUG00000022412	znf648	61	32.123
ENSSDUG00000010305	-	73	36.318	ENSSDUG00000002174	-	69	36.318
ENSSDUG00000010305	-	58	38.298	ENSSDUG00000022914	-	52	38.298
ENSSDUG00000010305	-	57	33.333	ENSSDUG00000000889	-	74	33.333
ENSSDUG00000010305	-	73	32.372	ENSSDUG00000009577	-	72	32.372
ENSSDUG00000010305	-	66	35.714	ENSSDUG00000009439	-	94	34.483
ENSSDUG00000010305	-	66	32.456	ENSSDUG00000013904	-	67	32.973
ENSSDUG00000010305	-	50	34.524	ENSSDUG00000013215	-	61	34.524
ENSSDUG00000010305	-	63	33.557	ENSSDUG00000008329	-	86	33.557
ENSSDUG00000010305	-	58	31.229	ENSSDUG00000009563	-	74	32.589
ENSSDUG00000010305	-	65	34.711	ENSSDUG00000000695	-	78	35.714
ENSSDUG00000010305	-	68	31.126	ENSSDUG00000018835	PRDM15	50	32.520
ENSSDUG00000010305	-	61	33.951	ENSSDUG00000000799	-	70	33.951
ENSSDUG00000010305	-	57	38.095	ENSSDUG00000006426	-	88	35.417
ENSSDUG00000010305	-	50	36.667	ENSSDUG00000019933	snai1a	53	34.118
ENSSDUG00000010305	-	58	38.261	ENSSDUG00000004867	-	99	38.261
ENSSDUG00000010305	-	61	32.828	ENSSDUG00000020397	prdm5	77	30.769
ENSSDUG00000010305	-	57	31.727	ENSSDUG00000023764	-	97	32.727
ENSSDUG00000010305	-	65	30.444	ENSSDUG00000019932	ZNF319	87	30.000
ENSSDUG00000010305	-	60	32.639	ENSSDUG00000004835	-	72	32.542
ENSSDUG00000010305	-	59	35.897	ENSSDUG00000011604	gfi1b	55	35.833
ENSSDUG00000010305	-	66	34.474	ENSSDUG00000009601	-	90	34.137
ENSSDUG00000010305	-	58	34.821	ENSSDUG00000023765	-	69	34.821
ENSSDUG00000010305	-	68	33.929	ENSSDUG00000015622	-	67	33.929
ENSSDUG00000010305	-	67	38.750	ENSSDUG00000007336	-	83	43.636
ENSSDUG00000010305	-	79	42.623	ENSSDUG00000002675	znf646	64	42.623
ENSSDUG00000010305	-	62	33.508	ENSSDUG00000011654	gfi1aa	53	33.508
ENSSDUG00000010305	-	66	32.891	ENSSDUG00000005401	-	93	31.892
ENSSDUG00000010305	-	57	36.392	ENSSDUG00000020810	-	70	36.392
ENSSDUG00000010305	-	58	35.802	ENSSDUG00000004650	-	99	35.802
ENSSDUG00000010305	-	64	33.645	ENSSDUG00000015182	-	75	32.176
ENSSDUG00000010305	-	66	34.392	ENSSDUG00000006808	-	86	34.392
ENSSDUG00000010305	-	60	30.714	ENSSDUG00000004892	-	58	30.491
ENSSDUG00000010305	-	75	33.333	ENSSDUG00000018060	snai2	71	33.333
ENSSDUG00000010305	-	83	40.909	ENSSDUG00000011170	znf236	62	40.909
ENSSDUG00000010305	-	60	37.019	ENSSDUG00000020788	-	63	39.286
ENSSDUG00000010305	-	58	30.657	ENSSDUG00000002488	-	60	30.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010305	-	99	75.298	ENSAPOG00000001097	-	97	77.399	Acanthochromis_polyacanthus
ENSSDUG00000010305	-	100	79.254	ENSATEG00000014755	-	100	78.358	Anabas_testudineus
ENSSDUG00000010305	-	62	34.915	ENSCSAG00000001938	ZNF845	84	33.668	Chlorocebus_sabaeus
ENSSDUG00000010305	-	58	35.714	ENSCSAVG00000007589	-	99	35.714	Ciona_savignyi
ENSSDUG00000010305	-	62	37.719	ENSCSAVG00000001989	-	100	37.719	Ciona_savignyi
ENSSDUG00000010305	-	60	36.538	ENSCANG00000038794	ZNF845	88	33.418	Colobus_angolensis_palliatus
ENSSDUG00000010305	-	61	30.809	ENSCGRG00001024630	-	83	30.809	Cricetulus_griseus_chok1gshd
ENSSDUG00000010305	-	62	33.938	ENSEBUG00000007308	ZNF845	90	33.420	Eptatretus_burgeri
ENSSDUG00000010305	-	58	39.130	ENSEBUG00000008852	ZNF845	73	39.130	Eptatretus_burgeri
ENSSDUG00000010305	-	62	32.598	ENSEBUG00000012628	ZNF845	82	32.087	Eptatretus_burgeri
ENSSDUG00000010305	-	58	32.520	ENSEBUG00000008988	ZNF845	86	32.992	Eptatretus_burgeri
ENSSDUG00000010305	-	69	66.434	ENSFHEG00000004454	-	98	66.434	Fundulus_heteroclitus
ENSSDUG00000010305	-	99	73.613	ENSHBUG00000009720	-	100	71.772	Haplochromis_burtoni
ENSSDUG00000010305	-	64	35.102	ENSMLEG00000044333	ZNF845	84	35.019	Mandrillus_leucophaeus
ENSSDUG00000010305	-	97	75.804	ENSMAMG00000018536	-	99	75.038	Mastacembelus_armatus
ENSSDUG00000010305	-	99	73.463	ENSMZEG00005020085	-	100	71.772	Maylandia_zebra
ENSSDUG00000010305	-	66	31.045	ENSMAUG00000014247	-	88	31.688	Mesocricetus_auratus
ENSSDUG00000010305	-	67	32.267	ENSMOCG00000002167	Zfp712	89	32.267	Microtus_ochrogaster
ENSSDUG00000010305	-	100	79.552	ENSMALG00000013321	-	100	78.955	Monopterus_albus
ENSSDUG00000010305	-	64	32.648	MGP_CAROLIEiJ_G0018661	Zfp759	96	34.115	Mus_caroli
ENSSDUG00000010305	-	64	31.757	ENSMUSG00000057396	Zfp759	90	33.073	Mus_musculus
ENSSDUG00000010305	-	62	34.118	ENSMUSG00000095432	Zfp748	91	33.032	Mus_musculus
ENSSDUG00000010305	-	67	31.839	MGP_PahariEiJ_G0015741	Zfp759	95	38.261	Mus_pahari
ENSSDUG00000010305	-	67	35.556	MGP_PahariEiJ_G0015756	Zfp748	91	32.579	Mus_pahari
ENSSDUG00000010305	-	64	31.982	MGP_SPRETEiJ_G0019544	Zfp759	91	32.812	Mus_spretus
ENSSDUG00000010305	-	62	35.556	MGP_SPRETEiJ_G0019560	Zfp748	91	33.032	Mus_spretus
ENSSDUG00000010305	-	61	36.538	ENSNLEG00000006172	ZNF845	80	33.417	Nomascus_leucogenys
ENSSDUG00000010305	-	95	62.853	ENSORLG00000028851	-	96	62.420	Oryzias_latipes
ENSSDUG00000010305	-	66	73.696	ENSOMEG00000010300	-	93	73.696	Oryzias_melastigma
ENSSDUG00000010305	-	58	32.888	ENSOGAG00000029343	-	78	33.679	Otolemur_garnettii
ENSSDUG00000010305	-	70	35.897	ENSPTRG00000050668	ZNF845	83	32.927	Pan_troglodytes
ENSSDUG00000010305	-	59	32.368	ENSPEMG00000020934	-	82	32.368	Peromyscus_maniculatus_bairdii
ENSSDUG00000010305	-	65	32.995	ENSPEMG00000021548	Zfp712	89	32.143	Peromyscus_maniculatus_bairdii
ENSSDUG00000010305	-	96	63.664	ENSPFOG00000010474	-	100	71.473	Poecilia_formosa
ENSSDUG00000010305	-	96	63.581	ENSPLAG00000017843	-	94	69.753	Poecilia_latipinna
ENSSDUG00000010305	-	96	64.275	ENSPMEG00000017809	-	99	64.122	Poecilia_mexicana
ENSSDUG00000010305	-	99	73.913	ENSPNYG00000021795	-	100	72.222	Pundamilia_nyererei
ENSSDUG00000010305	-	67	30.918	ENSRNOG00000049259	LOC102549842	93	32.544	Rattus_norvegicus
ENSSDUG00000010305	-	64	32.992	ENSRBIG00000035402	-	79	33.162	Rhinopithecus_bieti
ENSSDUG00000010305	-	69	34.349	ENSSBOG00000028573	-	73	34.444	Saimiri_boliviensis_boliviensis
ENSSDUG00000010305	-	99	75.970	ENSSPAG00000010470	-	100	75.224	Stegastes_partitus