EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000010477 (Gene tree)
Gene ID: 111232290
Gene Symbol: rrp8
Alias: fk33d07|si:ch211-149e23.3|si:ch211-152b13.1|wu:fk33d07
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5285 bases
Position: chrBDQW01000330.1:390772-396056
Accession: 111232290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014368	Methyltransf_8	PF05148.15	1.3e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000014644	-	2293	XM_022759732	ENSSDUP00000014368	564 (aa)	XP_022615453	UPI000BBE3CB8

Gene Model

Click here to download ENSSDUG00000010477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010477	rrp8	100	73.030	ENSAPOG00000008509	-	100	72.504	Acanthochromis_polyacanthus
ENSSDUG00000010477	rrp8	100	73.030	ENSAPOG00000010806	rrp8	98	72.504	Acanthochromis_polyacanthus
ENSSDUG00000010477	rrp8	100	73.030	ENSAPOG00000010798	-	98	72.504	Acanthochromis_polyacanthus
ENSSDUG00000010477	rrp8	94	65.177	ENSACIG00000019896	rrp8	100	65.736	Amphilophus_citrinellus
ENSSDUG00000010477	rrp8	100	73.205	ENSAOCG00000008785	rrp8	100	73.030	Amphiprion_ocellaris
ENSSDUG00000010477	rrp8	100	73.205	ENSAPEG00000008416	rrp8	100	73.030	Amphiprion_percula
ENSSDUG00000010477	rrp8	93	72.626	ENSATEG00000014110	rrp8	98	72.439	Anabas_testudineus
ENSSDUG00000010477	rrp8	100	67.254	ENSACLG00000002746	rrp8	100	67.606	Astatotilapia_calliptera
ENSSDUG00000010477	rrp8	94	45.652	ENSAMXG00000005164	rrp8	94	45.818	Astyanax_mexicanus
ENSSDUG00000010477	rrp8	74	40.334	ENSCSAVG00000006435	-	56	56.502	Ciona_savignyi
ENSSDUG00000010477	rrp8	71	63.682	ENSCSEG00000007330	rrp8	100	64.925	Cynoglossus_semilaevis
ENSSDUG00000010477	rrp8	100	61.511	ENSCVAG00000012032	rrp8	100	61.511	Cyprinodon_variegatus
ENSSDUG00000010477	rrp8	100	45.709	ENSDARG00000071652	rrp8	80	72.072	Danio_rerio
ENSSDUG00000010477	rrp8	100	50.167	ENSELUG00000008665	rrp8	100	50.000	Esox_lucius
ENSSDUG00000010477	rrp8	88	55.819	ENSGAFG00000012331	rrp8	99	56.213	Gambusia_affinis
ENSSDUG00000010477	rrp8	74	61.483	ENSGACG00000011343	rrp8	95	61.244	Gasterosteus_aculeatus
ENSSDUG00000010477	rrp8	100	67.016	ENSHBUG00000017131	rrp8	100	67.422	Haplochromis_burtoni
ENSSDUG00000010477	rrp8	100	52.604	ENSHCOG00000001293	rrp8	100	52.431	Hippocampus_comes
ENSSDUG00000010477	rrp8	100	45.167	ENSIPUG00000017733	rrp8	100	45.359	Ictalurus_punctatus
ENSSDUG00000010477	rrp8	100	62.304	ENSKMAG00000009229	rrp8	100	62.304	Kryptolebias_marmoratus
ENSSDUG00000010477	rrp8	69	72.194	ENSLBEG00000019937	rrp8	100	71.891	Labrus_bergylta
ENSSDUG00000010477	rrp8	54	45.955	ENSLOCG00000013776	-	89	52.991	Lepisosteus_oculatus
ENSSDUG00000010477	rrp8	100	46.897	ENSLOCG00000009591	rrp8	100	46.021	Lepisosteus_oculatus
ENSSDUG00000010477	rrp8	100	72.251	ENSMAMG00000009679	rrp8	100	71.902	Mastacembelus_armatus
ENSSDUG00000010477	rrp8	100	67.077	ENSMZEG00005008926	rrp8	100	67.430	Maylandia_zebra
ENSSDUG00000010477	rrp8	94	66.418	ENSMMOG00000015709	rrp8	100	66.231	Mola_mola
ENSSDUG00000010477	rrp8	100	71.304	ENSMALG00000015984	rrp8	100	71.304	Monopterus_albus
ENSSDUG00000010477	rrp8	86	53.846	ENSMPUG00000005510	RRP8	60	53.091	Mustela_putorius_furo
ENSSDUG00000010477	rrp8	75	68.531	ENSNBRG00000023416	rrp8	99	68.605	Neolamprologus_brichardi
ENSSDUG00000010477	rrp8	75	62.998	ENSONIG00000016861	rrp8	96	62.558	Oreochromis_niloticus
ENSSDUG00000010477	rrp8	100	61.352	ENSORLG00000004175	rrp8	99	61.525	Oryzias_latipes
ENSSDUG00000010477	rrp8	100	59.896	ENSORLG00020011413	rrp8	99	61.285	Oryzias_latipes_hni
ENSSDUG00000010477	rrp8	100	61.485	ENSORLG00015015410	rrp8	99	61.831	Oryzias_latipes_hsok
ENSSDUG00000010477	rrp8	100	60.616	ENSOMEG00000003161	rrp8	100	61.130	Oryzias_melastigma
ENSSDUG00000010477	rrp8	51	49.169	ENSOARG00000017435	RRP8	70	50.502	Ovis_aries
ENSSDUG00000010477	rrp8	100	45.941	ENSPKIG00000024217	rrp8	100	44.810	Paramormyrops_kingsleyae
ENSSDUG00000010477	rrp8	100	58.042	ENSPFOG00000007308	rrp8	100	58.464	Poecilia_formosa
ENSSDUG00000010477	rrp8	100	58.813	ENSPLAG00000011349	rrp8	100	58.813	Poecilia_latipinna
ENSSDUG00000010477	rrp8	100	58.217	ENSPMEG00000009888	rrp8	100	58.290	Poecilia_mexicana
ENSSDUG00000010477	rrp8	88	55.709	ENSPREG00000008450	rrp8	99	55.512	Poecilia_reticulata
ENSSDUG00000010477	rrp8	79	58.120	ENSPCAG00000016176	RRP8	100	58.621	Procavia_capensis
ENSSDUG00000010477	rrp8	100	66.725	ENSPNYG00000002878	rrp8	100	66.725	Pundamilia_nyererei
ENSSDUG00000010477	rrp8	100	48.714	ENSSFOG00015003917	rrp8	99	48.722	Scleropages_formosus
ENSSDUG00000010477	rrp8	100	74.159	ENSSMAG00000004859	rrp8	100	73.805	Scophthalmus_maximus
ENSSDUG00000010477	rrp8	100	95.583	ENSSLDG00000000521	rrp8	100	95.583	Seriola_lalandi_dorsalis
ENSSDUG00000010477	rrp8	69	75.127	ENSSPAG00000006664	rrp8	100	74.752	Stegastes_partitus
ENSSDUG00000010477	rrp8	100	63.028	ENSTRUG00000021812	rrp8	100	61.972	Takifugu_rubripes
ENSSDUG00000010477	rrp8	71	60.349	ENSXCOG00000006156	rrp8	100	61.443	Xiphophorus_couchianus
ENSSDUG00000010477	rrp8	100	56.790	ENSXMAG00000005011	rrp8	100	58.524	Xiphophorus_maculatus