EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000010594 (Gene tree)
Gene ID: 111228771
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3795 bases
Position: chrBDQW01000226.1:2540749-2544543
Accession: 111228771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014508	S4	PF01479.25	4.4e-09	1	1
ENSSDUP00000014508	Ribosomal_S4	PF00163.19	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000014789	-	2773	XM_022754798	ENSSDUP00000014508	183 (aa)	XP_022610519	UPI000BBF30D0

Gene Model

Click here to download ENSSDUG00000010594's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010594's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010594	imp3	100	94.536	ENSAPOG00000014720	imp3	100	94.536	Acanthochromis_polyacanthus
ENSSDUG00000010594	imp3	100	70.652	ENSAMEG00000019247	IMP3	100	70.652	Ailuropoda_melanoleuca
ENSSDUG00000010594	imp3	98	94.413	ENSACIG00000022070	imp3	96	94.413	Amphilophus_citrinellus
ENSSDUG00000010594	imp3	100	93.989	ENSAOCG00000015761	imp3	100	93.989	Amphiprion_ocellaris
ENSSDUG00000010594	imp3	100	93.443	ENSAPEG00000005250	imp3	100	93.443	Amphiprion_percula
ENSSDUG00000010594	imp3	100	97.268	ENSATEG00000020021	imp3	100	97.268	Anabas_testudineus
ENSSDUG00000010594	imp3	100	67.914	ENSACAG00000016259	IMP3	100	67.914	Anolis_carolinensis
ENSSDUG00000010594	imp3	100	69.565	ENSANAG00000016669	-	100	69.565	Aotus_nancymaae
ENSSDUG00000010594	imp3	99	58.791	ENSANAG00000036874	-	99	58.791	Aotus_nancymaae
ENSSDUG00000010594	imp3	100	94.536	ENSACLG00000009929	imp3	100	94.536	Astatotilapia_calliptera
ENSSDUG00000010594	imp3	96	85.714	ENSAMXG00000018715	imp3	99	85.714	Astyanax_mexicanus
ENSSDUG00000010594	imp3	99	53.297	WBGene00016740	C48B6.2	99	53.297	Caenorhabditis_elegans
ENSSDUG00000010594	imp3	100	69.565	ENSCJAG00000044585	IMP3	100	69.565	Callithrix_jacchus
ENSSDUG00000010594	imp3	100	67.935	ENSCAFG00000018039	IMP3	82	67.935	Canis_familiaris
ENSSDUG00000010594	imp3	100	55.978	ENSCAFG00020006737	-	100	57.065	Canis_lupus_dingo
ENSSDUG00000010594	imp3	100	67.935	ENSCAFG00020003760	-	100	67.935	Canis_lupus_dingo
ENSSDUG00000010594	imp3	100	70.652	ENSCHIG00000006295	IMP3	100	70.652	Capra_hircus
ENSSDUG00000010594	imp3	100	70.109	ENSTSYG00000005503	IMP3	100	70.109	Carlito_syrichta
ENSSDUG00000010594	imp3	100	70.652	ENSCPOG00000012016	IMP3	100	70.652	Cavia_porcellus
ENSSDUG00000010594	imp3	98	61.111	ENSCCAG00000023378	-	99	59.770	Cebus_capucinus
ENSSDUG00000010594	imp3	100	69.565	ENSCCAG00000002712	-	100	69.565	Cebus_capucinus
ENSSDUG00000010594	imp3	100	70.109	ENSCATG00000015188	IMP3	100	70.109	Cercocebus_atys
ENSSDUG00000010594	imp3	100	70.109	ENSCSAG00000019732	IMP3	100	70.109	Chlorocebus_sabaeus
ENSSDUG00000010594	imp3	100	70.109	ENSCHOG00000012046	IMP3	100	70.109	Choloepus_hoffmanni
ENSSDUG00000010594	imp3	100	65.405	ENSCPBG00000021662	IMP3	100	65.405	Chrysemys_picta_bellii
ENSSDUG00000010594	imp3	99	66.851	ENSCING00000004233	-	100	66.851	Ciona_intestinalis
ENSSDUG00000010594	imp3	99	68.508	ENSCSAVG00000000698	-	100	68.508	Ciona_savignyi
ENSSDUG00000010594	imp3	100	70.109	ENSCANG00000018342	IMP3	100	70.109	Colobus_angolensis_palliatus
ENSSDUG00000010594	imp3	100	68.478	ENSCGRG00001001326	Imp3	100	68.478	Cricetulus_griseus_chok1gshd
ENSSDUG00000010594	imp3	100	68.478	ENSCGRG00000018907	Imp3	100	68.478	Cricetulus_griseus_crigri
ENSSDUG00000010594	imp3	99	90.659	ENSCSEG00000017200	imp3	99	90.659	Cynoglossus_semilaevis
ENSSDUG00000010594	imp3	100	82.632	ENSCVAG00000019511	imp3	100	82.632	Cyprinodon_variegatus
ENSSDUG00000010594	imp3	100	85.246	ENSDARG00000115266	imp3	100	85.246	Danio_rerio
ENSSDUG00000010594	imp3	100	69.022	ENSDNOG00000015787	IMP3	81	69.022	Dasypus_novemcinctus
ENSSDUG00000010594	imp3	100	68.478	ENSDORG00000029301	Imp3	100	68.478	Dipodomys_ordii
ENSSDUG00000010594	imp3	99	61.326	FBgn0034232	CG4866	100	61.326	Drosophila_melanogaster
ENSSDUG00000010594	imp3	100	71.196	ENSETEG00000004278	IMP3	100	71.196	Echinops_telfairi
ENSSDUG00000010594	imp3	99	72.928	ENSEBUG00000002343	imp3	99	72.928	Eptatretus_burgeri
ENSSDUG00000010594	imp3	100	69.565	ENSEASG00005015693	IMP3	100	69.565	Equus_asinus_asinus
ENSSDUG00000010594	imp3	100	70.109	ENSECAG00000015786	IMP3	100	70.109	Equus_caballus
ENSSDUG00000010594	imp3	100	89.617	ENSELUG00000023264	imp3	100	89.617	Esox_lucius
ENSSDUG00000010594	imp3	100	70.109	ENSFCAG00000040328	IMP3	100	70.109	Felis_catus
ENSSDUG00000010594	imp3	71	54.198	ENSFALG00000014811	IMP3	99	56.489	Ficedula_albicollis
ENSSDUG00000010594	imp3	100	70.109	ENSFDAG00000018422	IMP3	100	70.109	Fukomys_damarensis
ENSSDUG00000010594	imp3	100	92.350	ENSFHEG00000016954	imp3	100	92.350	Fundulus_heteroclitus
ENSSDUG00000010594	imp3	100	89.071	ENSGMOG00000018162	imp3	100	89.071	Gadus_morhua
ENSSDUG00000010594	imp3	100	55.676	ENSGALG00000040238	IMP3	100	57.297	Gallus_gallus
ENSSDUG00000010594	imp3	100	94.536	ENSGAFG00000007425	imp3	100	94.536	Gambusia_affinis
ENSSDUG00000010594	imp3	100	91.803	ENSGACG00000015998	imp3	100	91.803	Gasterosteus_aculeatus
ENSSDUG00000010594	imp3	100	64.324	ENSGAGG00000008163	IMP3	100	64.324	Gopherus_agassizii
ENSSDUG00000010594	imp3	100	70.109	ENSGGOG00000025122	IMP3	100	70.109	Gorilla_gorilla
ENSSDUG00000010594	imp3	100	95.082	ENSHBUG00000018453	imp3	100	95.082	Haplochromis_burtoni
ENSSDUG00000010594	imp3	100	69.565	ENSHGLG00000019824	IMP3	100	69.565	Heterocephalus_glaber_female
ENSSDUG00000010594	imp3	100	69.565	ENSHGLG00100020660	IMP3	100	69.565	Heterocephalus_glaber_male
ENSSDUG00000010594	imp3	100	92.350	ENSHCOG00000020565	imp3	100	92.350	Hippocampus_comes
ENSSDUG00000010594	imp3	100	86.339	ENSIPUG00000013142	imp3	100	86.339	Ictalurus_punctatus
ENSSDUG00000010594	imp3	100	70.652	ENSSTOG00000030143	IMP3	100	70.652	Ictidomys_tridecemlineatus
ENSSDUG00000010594	imp3	100	93.443	ENSKMAG00000001956	imp3	100	93.443	Kryptolebias_marmoratus
ENSSDUG00000010594	imp3	100	93.989	ENSLBEG00000008178	imp3	100	93.989	Labrus_bergylta
ENSSDUG00000010594	imp3	100	82.514	ENSLACG00000022148	imp3	100	82.514	Latimeria_chalumnae
ENSSDUG00000010594	imp3	100	85.246	ENSLOCG00000010237	imp3	100	85.246	Lepisosteus_oculatus
ENSSDUG00000010594	imp3	99	69.780	ENSLAFG00000004425	IMP3	99	69.780	Loxodonta_africana
ENSSDUG00000010594	imp3	100	70.109	ENSMFAG00000008867	IMP3	100	70.109	Macaca_fascicularis
ENSSDUG00000010594	imp3	100	70.109	ENSMMUG00000016103	IMP3	100	70.109	Macaca_mulatta
ENSSDUG00000010594	imp3	100	70.109	ENSMNEG00000026328	IMP3	100	70.109	Macaca_nemestrina
ENSSDUG00000010594	imp3	100	95.628	ENSMAMG00000003215	imp3	100	95.628	Mastacembelus_armatus
ENSSDUG00000010594	imp3	100	94.536	ENSMZEG00005005544	imp3	100	94.536	Maylandia_zebra
ENSSDUG00000010594	imp3	100	69.022	ENSMAUG00000010279	Imp3	100	69.022	Mesocricetus_auratus
ENSSDUG00000010594	imp3	100	70.109	ENSMICG00000044149	IMP3	100	70.109	Microcebus_murinus
ENSSDUG00000010594	imp3	100	69.565	ENSMOCG00000008647	Imp3	100	69.565	Microtus_ochrogaster
ENSSDUG00000010594	imp3	96	94.286	ENSMMOG00000018117	imp3	84	94.286	Mola_mola
ENSSDUG00000010594	imp3	100	69.565	ENSMODG00000025193	IMP3	100	69.565	Monodelphis_domestica
ENSSDUG00000010594	imp3	100	96.721	ENSMALG00000006505	imp3	100	96.721	Monopterus_albus
ENSSDUG00000010594	imp3	100	69.022	MGP_CAROLIEiJ_G0032258	Imp3	100	69.022	Mus_caroli
ENSSDUG00000010594	imp3	100	69.022	ENSMUSG00000032288	Imp3	100	69.022	Mus_musculus
ENSSDUG00000010594	imp3	100	69.022	MGP_PahariEiJ_G0015125	Imp3	100	69.022	Mus_pahari
ENSSDUG00000010594	imp3	100	69.022	MGP_SPRETEiJ_G0033398	Imp3	100	69.022	Mus_spretus
ENSSDUG00000010594	imp3	100	69.565	ENSMPUG00000020147	IMP3	100	69.565	Mustela_putorius_furo
ENSSDUG00000010594	imp3	100	70.109	ENSMLUG00000014032	IMP3	100	70.109	Myotis_lucifugus
ENSSDUG00000010594	imp3	100	67.391	ENSNGAG00000017248	Imp3	100	67.391	Nannospalax_galili
ENSSDUG00000010594	imp3	100	94.536	ENSNBRG00000004060	imp3	100	94.536	Neolamprologus_brichardi
ENSSDUG00000010594	imp3	100	70.109	ENSOPRG00000015906	-	100	70.109	Ochotona_princeps
ENSSDUG00000010594	imp3	100	70.652	ENSODEG00000020194	IMP3	100	70.652	Octodon_degus
ENSSDUG00000010594	imp3	100	93.443	ENSONIG00000010661	imp3	100	93.443	Oreochromis_niloticus
ENSSDUG00000010594	imp3	100	70.109	ENSOCUG00000004690	IMP3	100	70.109	Oryctolagus_cuniculus
ENSSDUG00000010594	imp3	100	91.803	ENSORLG00000004484	imp3	100	91.803	Oryzias_latipes
ENSSDUG00000010594	imp3	100	91.803	ENSORLG00020003771	imp3	100	91.803	Oryzias_latipes_hni
ENSSDUG00000010594	imp3	100	91.257	ENSORLG00015006933	imp3	100	91.257	Oryzias_latipes_hsok
ENSSDUG00000010594	imp3	100	92.896	ENSOMEG00000016160	imp3	100	92.896	Oryzias_melastigma
ENSSDUG00000010594	imp3	100	70.109	ENSOGAG00000004917	IMP3	100	70.109	Otolemur_garnettii
ENSSDUG00000010594	imp3	100	70.109	ENSPPAG00000009241	IMP3	100	70.109	Pan_paniscus
ENSSDUG00000010594	imp3	100	70.109	ENSPPRG00000018701	IMP3	100	70.109	Panthera_pardus
ENSSDUG00000010594	imp3	100	70.109	ENSPTRG00000052235	IMP3	100	70.109	Pan_troglodytes
ENSSDUG00000010594	imp3	100	70.109	ENSPANG00000013668	IMP3	100	70.109	Papio_anubis
ENSSDUG00000010594	imp3	100	87.978	ENSPKIG00000007169	imp3	100	87.978	Paramormyrops_kingsleyae
ENSSDUG00000010594	imp3	100	82.796	ENSPMGG00000009379	imp3	100	82.796	Periophthalmus_magnuspinnatus
ENSSDUG00000010594	imp3	100	68.478	ENSPEMG00000013003	Imp3	100	68.478	Peromyscus_maniculatus_bairdii
ENSSDUG00000010594	imp3	100	94.536	ENSPFOG00000016529	imp3	100	94.536	Poecilia_formosa
ENSSDUG00000010594	imp3	100	95.082	ENSPLAG00000013831	imp3	100	95.082	Poecilia_latipinna
ENSSDUG00000010594	imp3	100	93.989	ENSPMEG00000000797	imp3	100	93.989	Poecilia_mexicana
ENSSDUG00000010594	imp3	100	94.536	ENSPREG00000006885	imp3	100	94.536	Poecilia_reticulata
ENSSDUG00000010594	imp3	100	70.652	ENSPPYG00000006664	IMP3	100	70.652	Pongo_abelii
ENSSDUG00000010594	imp3	99	69.780	ENSPCAG00000006920	IMP3	99	69.780	Procavia_capensis
ENSSDUG00000010594	imp3	100	70.109	ENSPCOG00000012367	IMP3	100	70.109	Propithecus_coquereli
ENSSDUG00000010594	imp3	100	70.652	ENSPVAG00000010036	IMP3	100	70.652	Pteropus_vampyrus
ENSSDUG00000010594	imp3	100	94.536	ENSPNYG00000000324	imp3	100	94.536	Pundamilia_nyererei
ENSSDUG00000010594	imp3	100	90.710	ENSPNAG00000017113	imp3	100	90.710	Pygocentrus_nattereri
ENSSDUG00000010594	imp3	100	68.478	ENSRNOG00000017460	Imp3	100	68.478	Rattus_norvegicus
ENSSDUG00000010594	imp3	100	70.652	ENSRBIG00000024522	IMP3	100	70.652	Rhinopithecus_bieti
ENSSDUG00000010594	imp3	100	70.652	ENSRROG00000024157	IMP3	100	70.652	Rhinopithecus_roxellana
ENSSDUG00000010594	imp3	99	55.495	YHR148W	-	99	55.495	Saccharomyces_cerevisiae
ENSSDUG00000010594	imp3	100	69.565	ENSSBOG00000006542	-	100	69.565	Saimiri_boliviensis_boliviensis
ENSSDUG00000010594	imp3	99	60.440	ENSSBOG00000026404	-	99	60.440	Saimiri_boliviensis_boliviensis
ENSSDUG00000010594	imp3	99	67.033	ENSSHAG00000006200	IMP3	99	67.033	Sarcophilus_harrisii
ENSSDUG00000010594	imp3	100	88.525	ENSSFOG00015012483	imp3	100	88.525	Scleropages_formosus
ENSSDUG00000010594	imp3	100	96.175	ENSSMAG00000007865	imp3	100	96.175	Scophthalmus_maximus
ENSSDUG00000010594	imp3	100	98.907	ENSSLDG00000015587	imp3	100	98.907	Seriola_lalandi_dorsalis
ENSSDUG00000010594	imp3	100	70.652	ENSSARG00000009657	IMP3	100	70.652	Sorex_araneus
ENSSDUG00000010594	imp3	100	94.536	ENSSPAG00000002088	imp3	100	94.536	Stegastes_partitus
ENSSDUG00000010594	imp3	100	55.676	ENSTGUG00000013228	IMP3	100	57.297	Taeniopygia_guttata
ENSSDUG00000010594	imp3	99	92.857	ENSTRUG00000025783	imp3	99	92.857	Takifugu_rubripes
ENSSDUG00000010594	imp3	100	70.109	ENSUAMG00000022724	IMP3	100	70.109	Ursus_americanus
ENSSDUG00000010594	imp3	100	70.109	ENSUMAG00000003736	IMP3	100	70.109	Ursus_maritimus
ENSSDUG00000010594	imp3	100	68.478	ENSVVUG00000019589	IMP3	100	68.478	Vulpes_vulpes
ENSSDUG00000010594	imp3	96	95.429	ENSXCOG00000007392	imp3	96	95.429	Xiphophorus_couchianus
ENSSDUG00000010594	imp3	100	95.628	ENSXMAG00000023049	imp3	100	95.628	Xiphophorus_maculatus