EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000010621 (Gene tree)
Gene ID: 111219284
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: la-related protein 4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 13316 bases
Position: chrBDQW01000056.1:5285429-5298744
Accession: 111219284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014563	La	PF05383.17	2.7e-17	1	1
ENSSDUP00000014534	La	PF05383.17	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000014844	-	5726	XM_022741912	ENSSDUP00000014563	796 (aa)	XP_022597633	UPI000BBE1289
ENSSDUT00000014815	-	5768	XM_022741910	ENSSDUP00000014534	810 (aa)	XP_022597631	UPI000BBE17DB

Gene Model

Click here to download ENSSDUG00000010621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000010621	larp4aa	83	38.014	ENSSDUG00000006704	LARP4B	54	41.798
ENSSDUG00000010621	larp4aa	95	51.511	ENSSDUG00000006655	larp4ab	51	66.240

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010621	larp4aa	87	61.338	ENSG00000161813	LARP4	95	65.054	Homo_sapiens
ENSSDUG00000010621	larp4aa	95	51.523	ENSAPOG00000021331	larp4ab	54	63.793	Acanthochromis_polyacanthus
ENSSDUG00000010621	larp4aa	100	91.728	ENSAPOG00000007142	larp4aa	100	91.728	Acanthochromis_polyacanthus
ENSSDUG00000010621	larp4aa	100	86.073	ENSACIG00000001198	larp4aa	100	86.575	Amphilophus_citrinellus
ENSSDUG00000010621	larp4aa	100	92.840	ENSAOCG00000002408	larp4aa	100	92.716	Amphiprion_ocellaris
ENSSDUG00000010621	larp4aa	95	51.015	ENSAOCG00000006387	larp4ab	54	62.808	Amphiprion_ocellaris
ENSSDUG00000010621	larp4aa	100	92.716	ENSAPEG00000019058	larp4aa	100	92.593	Amphiprion_percula
ENSSDUG00000010621	larp4aa	95	49.936	ENSATEG00000001018	larp4ab	54	58.374	Anabas_testudineus
ENSSDUG00000010621	larp4aa	100	90.578	ENSATEG00000020715	larp4aa	100	90.201	Anabas_testudineus
ENSSDUG00000010621	larp4aa	95	50.063	ENSAPLG00000013661	LARP4	51	66.146	Anas_platyrhynchos
ENSSDUG00000010621	larp4aa	95	49.872	ENSACAG00000017133	LARP4	96	49.680	Anolis_carolinensis
ENSSDUG00000010621	larp4aa	82	63.807	ENSANAG00000029342	LARP4	96	63.904	Aotus_nancymaae
ENSSDUG00000010621	larp4aa	100	88.329	ENSACLG00000002575	larp4aa	100	87.469	Astatotilapia_calliptera
ENSSDUG00000010621	larp4aa	100	52.330	ENSAMXG00000001515	larp4ab	100	54.102	Astyanax_mexicanus
ENSSDUG00000010621	larp4aa	100	65.707	ENSAMXG00000036493	larp4aa	100	65.588	Astyanax_mexicanus
ENSSDUG00000010621	larp4aa	82	63.539	ENSCJAG00000021131	LARP4	96	63.636	Callithrix_jacchus
ENSSDUG00000010621	larp4aa	82	62.634	ENSCAFG00020014554	LARP4	83	60.627	Canis_lupus_dingo
ENSSDUG00000010621	larp4aa	95	51.306	ENSTSYG00000004342	LARP4	96	63.130	Carlito_syrichta
ENSSDUG00000010621	larp4aa	94	37.255	ENSCAPG00000012942	LARP4	91	46.467	Cavia_aperea
ENSSDUG00000010621	larp4aa	87	61.710	ENSCCAG00000024439	LARP4	96	62.963	Cebus_capucinus
ENSSDUG00000010621	larp4aa	83	57.403	ENSCANG00000033097	-	90	59.880	Colobus_angolensis_palliatus
ENSSDUG00000010621	larp4aa	82	63.807	ENSCANG00000029159	-	96	63.904	Colobus_angolensis_palliatus
ENSSDUG00000010621	larp4aa	100	87.775	ENSCSEG00000001963	larp4aa	100	88.264	Cynoglossus_semilaevis
ENSSDUG00000010621	larp4aa	100	86.084	ENSCVAG00000005488	larp4aa	100	86.084	Cyprinodon_variegatus
ENSSDUG00000010621	larp4aa	100	64.338	ENSDARG00000078401	larp4aa	100	62.802	Danio_rerio
ENSSDUG00000010621	larp4aa	95	52.503	ENSDARG00000074979	larp4ab	83	82.313	Danio_rerio
ENSSDUG00000010621	larp4aa	95	48.597	ENSDNOG00000038525	LARP4	52	62.500	Dasypus_novemcinctus
ENSSDUG00000010621	larp4aa	84	58.594	ENSDORG00000004013	Larp4	88	58.594	Dipodomys_ordii
ENSSDUG00000010621	larp4aa	69	54.779	ENSETEG00000011683	LARP4	72	54.779	Echinops_telfairi
ENSSDUG00000010621	larp4aa	67	40.105	ENSEBUG00000004426	LARP4	67	45.269	Eptatretus_burgeri
ENSSDUG00000010621	larp4aa	65	59.664	ENSEASG00005004356	LARP4	82	61.728	Equus_asinus_asinus
ENSSDUG00000010621	larp4aa	52	85.470	ENSEEUG00000000316	LARP4	52	85.470	Erinaceus_europaeus
ENSSDUG00000010621	larp4aa	95	51.933	ENSELUG00000018650	larp4ab	84	80.263	Esox_lucius
ENSSDUG00000010621	larp4aa	100	62.350	ENSELUG00000000395	larp4aa	79	84.426	Esox_lucius
ENSSDUG00000010621	larp4aa	82	63.298	ENSFCAG00000031897	LARP4	96	63.395	Felis_catus
ENSSDUG00000010621	larp4aa	80	51.807	ENSFALG00000002114	LARP4	57	65.625	Ficedula_albicollis
ENSSDUG00000010621	larp4aa	95	46.095	ENSFHEG00000013854	larp4ab	99	45.431	Fundulus_heteroclitus
ENSSDUG00000010621	larp4aa	100	84.166	ENSFHEG00000004338	larp4aa	100	83.922	Fundulus_heteroclitus
ENSSDUG00000010621	larp4aa	100	74.311	ENSGMOG00000008246	larp4aa	100	71.910	Gadus_morhua
ENSSDUG00000010621	larp4aa	91	49.399	ENSGALG00000042122	LARP4	50	66.406	Gallus_gallus
ENSSDUG00000010621	larp4aa	95	48.205	ENSGAFG00000021777	larp4ab	99	46.947	Gambusia_affinis
ENSSDUG00000010621	larp4aa	100	84.355	ENSGACG00000008381	larp4aa	98	92.541	Gasterosteus_aculeatus
ENSSDUG00000010621	larp4aa	95	49.681	ENSGACG00000000680	larp4ab	59	61.634	Gasterosteus_aculeatus
ENSSDUG00000010621	larp4aa	95	50.895	ENSGAGG00000006969	LARP4	51	66.146	Gopherus_agassizii
ENSSDUG00000010621	larp4aa	83	62.500	ENSGGOG00000015230	LARP4	82	67.296	Gorilla_gorilla
ENSSDUG00000010621	larp4aa	100	88.084	ENSHBUG00000023074	larp4aa	100	87.224	Haplochromis_burtoni
ENSSDUG00000010621	larp4aa	95	47.490	ENSHGLG00100011678	-	54	61.757	Heterocephalus_glaber_male
ENSSDUG00000010621	larp4aa	95	46.348	ENSHCOG00000020857	larp4ab	53	56.140	Hippocampus_comes
ENSSDUG00000010621	larp4aa	100	77.435	ENSHCOG00000015951	larp4aa	100	77.435	Hippocampus_comes
ENSSDUG00000010621	larp4aa	95	48.961	ENSIPUG00000021659	larp4ab	54	63.003	Ictalurus_punctatus
ENSSDUG00000010621	larp4aa	100	62.665	ENSIPUG00000007514	larp4aa	100	62.077	Ictalurus_punctatus
ENSSDUG00000010621	larp4aa	95	49.233	ENSKMAG00000018556	larp4ab	100	47.205	Kryptolebias_marmoratus
ENSSDUG00000010621	larp4aa	100	86.683	ENSKMAG00000006800	larp4aa	100	85.820	Kryptolebias_marmoratus
ENSSDUG00000010621	larp4aa	97	89.702	ENSLBEG00000014537	larp4aa	100	87.500	Labrus_bergylta
ENSSDUG00000010621	larp4aa	95	50.255	ENSLBEG00000019306	larp4ab	54	62.129	Labrus_bergylta
ENSSDUG00000010621	larp4aa	99	51.130	ENSLACG00000019090	LARP4	56	63.785	Latimeria_chalumnae
ENSSDUG00000010621	larp4aa	100	61.165	ENSLOCG00000007113	larp4ab	100	61.098	Lepisosteus_oculatus
ENSSDUG00000010621	larp4aa	81	47.344	ENSLAFG00000005160	LARP4	84	74.800	Loxodonta_africana
ENSSDUG00000010621	larp4aa	82	63.807	ENSMFAG00000043681	LARP4	96	63.904	Macaca_fascicularis
ENSSDUG00000010621	larp4aa	82	63.807	ENSMMUG00000008172	LARP4	96	63.904	Macaca_mulatta
ENSSDUG00000010621	larp4aa	83	47.170	ENSMNEG00000037799	-	84	75.862	Macaca_nemestrina
ENSSDUG00000010621	larp4aa	87	62.454	ENSMLEG00000039661	LARP4	96	63.904	Mandrillus_leucophaeus
ENSSDUG00000010621	larp4aa	95	51.344	ENSMAMG00000002616	larp4ab	54	62.408	Mastacembelus_armatus
ENSSDUG00000010621	larp4aa	100	91.492	ENSMAMG00000011206	larp4aa	100	91.122	Mastacembelus_armatus
ENSSDUG00000010621	larp4aa	100	88.452	ENSMZEG00005001813	larp4aa	100	87.592	Maylandia_zebra
ENSSDUG00000010621	larp4aa	91	48.794	ENSMGAG00000010598	LARP4	50	66.406	Meleagris_gallopavo
ENSSDUG00000010621	larp4aa	65	78.151	ENSMICG00000030156	-	75	78.151	Microcebus_murinus
ENSSDUG00000010621	larp4aa	69	76.923	ENSMICG00000012388	-	93	77.011	Microcebus_murinus
ENSSDUG00000010621	larp4aa	82	64.785	ENSMOCG00000020635	Larp4	85	68.354	Microtus_ochrogaster
ENSSDUG00000010621	larp4aa	100	82.331	ENSMMOG00000004785	larp4aa	100	81.595	Mola_mola
ENSSDUG00000010621	larp4aa	95	46.976	ENSMMOG00000021861	larp4ab	97	57.105	Mola_mola
ENSSDUG00000010621	larp4aa	72	63.889	MGP_CAROLIEiJ_G0020281	Larp4	83	63.777	Mus_caroli
ENSSDUG00000010621	larp4aa	84	64.211	ENSMUSG00000023025	Larp4	87	67.485	Mus_musculus
ENSSDUG00000010621	larp4aa	84	63.947	MGP_PahariEiJ_G0020284	Larp4	88	63.947	Mus_pahari
ENSSDUG00000010621	larp4aa	81	64.595	ENSNGAG00000001577	-	86	68.038	Nannospalax_galili
ENSSDUG00000010621	larp4aa	100	88.084	ENSNBRG00000011292	larp4aa	100	87.346	Neolamprologus_brichardi
ENSSDUG00000010621	larp4aa	87	62.082	ENSNLEG00000017798	LARP4	96	63.369	Nomascus_leucogenys
ENSSDUG00000010621	larp4aa	95	48.196	ENSODEG00000009770	LARP4	89	62.725	Octodon_degus
ENSSDUG00000010621	larp4aa	100	88.959	ENSONIG00000011895	larp4aa	100	88.331	Oreochromis_niloticus
ENSSDUG00000010621	larp4aa	95	47.589	ENSONIG00000019124	larp4ab	50	62.667	Oreochromis_niloticus
ENSSDUG00000010621	larp4aa	67	53.014	ENSOANG00000004373	LARP4	67	61.619	Ornithorhynchus_anatinus
ENSSDUG00000010621	larp4aa	95	49.237	ENSOCUG00000026872	-	52	62.857	Oryctolagus_cuniculus
ENSSDUG00000010621	larp4aa	95	48.593	ENSOCUG00000021417	-	52	61.780	Oryctolagus_cuniculus
ENSSDUG00000010621	larp4aa	100	81.504	ENSORLG00000006758	larp4aa	100	79.901	Oryzias_latipes
ENSSDUG00000010621	larp4aa	100	81.011	ENSORLG00020010258	larp4aa	100	79.531	Oryzias_latipes_hni
ENSSDUG00000010621	larp4aa	100	80.518	ENSORLG00015002292	larp4aa	100	78.792	Oryzias_latipes_hsok
ENSSDUG00000010621	larp4aa	100	76.753	ENSOMEG00000019749	larp4aa	96	86.441	Oryzias_melastigma
ENSSDUG00000010621	larp4aa	68	62.760	ENSPPAG00000035100	LARP4	87	62.434	Pan_paniscus
ENSSDUG00000010621	larp4aa	82	63.298	ENSPPRG00000004522	LARP4	96	63.395	Panthera_pardus
ENSSDUG00000010621	larp4aa	82	63.298	ENSPTIG00000015617	LARP4	96	63.395	Panthera_tigris_altaica
ENSSDUG00000010621	larp4aa	82	62.735	ENSPTRG00000004935	LARP4	96	62.834	Pan_troglodytes
ENSSDUG00000010621	larp4aa	87	62.454	ENSPANG00000022964	LARP4	96	63.904	Papio_anubis
ENSSDUG00000010621	larp4aa	100	60.000	ENSPKIG00000005950	larp4ab	100	59.521	Paramormyrops_kingsleyae
ENSSDUG00000010621	larp4aa	85	64.377	ENSPSIG00000015867	LARP4	88	64.377	Pelodiscus_sinensis
ENSSDUG00000010621	larp4aa	53	57.708	ENSPMAG00000002788	LARP4	78	57.752	Petromyzon_marinus
ENSSDUG00000010621	larp4aa	96	49.872	ENSPCIG00000000384	LARP4	99	50.064	Phascolarctos_cinereus
ENSSDUG00000010621	larp4aa	95	48.010	ENSPFOG00000009764	larp4ab	99	46.709	Poecilia_formosa
ENSSDUG00000010621	larp4aa	100	85.276	ENSPFOG00000013148	larp4aa	100	85.644	Poecilia_formosa
ENSSDUG00000010621	larp4aa	100	85.019	ENSPLAG00000013626	larp4aa	100	85.393	Poecilia_latipinna
ENSSDUG00000010621	larp4aa	95	48.267	ENSPLAG00000008502	larp4ab	99	47.247	Poecilia_latipinna
ENSSDUG00000010621	larp4aa	95	47.821	ENSPMEG00000002720	larp4ab	99	47.051	Poecilia_mexicana
ENSSDUG00000010621	larp4aa	100	85.153	ENSPMEG00000014271	larp4aa	100	85.644	Poecilia_mexicana
ENSSDUG00000010621	larp4aa	100	85.000	ENSPREG00000022597	larp4aa	100	85.500	Poecilia_reticulata
ENSSDUG00000010621	larp4aa	64	54.802	ENSPPYG00000004512	-	73	62.597	Pongo_abelii
ENSSDUG00000010621	larp4aa	73	67.010	ENSPCAG00000003671	LARP4	80	67.010	Procavia_capensis
ENSSDUG00000010621	larp4aa	82	63.539	ENSPCOG00000026291	LARP4	96	63.941	Propithecus_coquereli
ENSSDUG00000010621	larp4aa	100	88.329	ENSPNYG00000022265	larp4aa	100	87.469	Pundamilia_nyererei
ENSSDUG00000010621	larp4aa	96	54.489	ENSPNAG00000014478	larp4ab	99	54.626	Pygocentrus_nattereri
ENSSDUG00000010621	larp4aa	97	63.716	ENSPNAG00000024770	larp4aa	99	63.591	Pygocentrus_nattereri
ENSSDUG00000010621	larp4aa	81	55.288	ENSRBIG00000038857	-	90	63.492	Rhinopithecus_bieti
ENSSDUG00000010621	larp4aa	68	54.023	ENSRBIG00000036890	-	80	54.023	Rhinopithecus_bieti
ENSSDUG00000010621	larp4aa	68	54.023	ENSRROG00000025487	-	92	56.041	Rhinopithecus_roxellana
ENSSDUG00000010621	larp4aa	87	62.454	ENSRROG00000042764	-	96	63.904	Rhinopithecus_roxellana
ENSSDUG00000010621	larp4aa	82	62.735	ENSSBOG00000026650	LARP4	96	62.834	Saimiri_boliviensis_boliviensis
ENSSDUG00000010621	larp4aa	100	59.854	ENSSFOG00015014096	larp4ab	100	60.096	Scleropages_formosus
ENSSDUG00000010621	larp4aa	99	61.616	ENSSFOG00015003868	larp4aa	59	73.068	Scleropages_formosus
ENSSDUG00000010621	larp4aa	95	50.695	ENSSMAG00000002838	larp4ab	100	49.872	Scophthalmus_maximus
ENSSDUG00000010621	larp4aa	100	91.626	ENSSMAG00000019473	larp4aa	100	91.626	Scophthalmus_maximus
ENSSDUG00000010621	larp4aa	100	99.136	ENSSLDG00000004942	larp4aa	100	99.136	Seriola_lalandi_dorsalis
ENSSDUG00000010621	larp4aa	95	51.592	ENSSLDG00000001791	larp4ab	100	51.781	Seriola_lalandi_dorsalis
ENSSDUG00000010621	larp4aa	63	61.954	ENSSARG00000012469	LARP4	68	61.954	Sorex_araneus
ENSSDUG00000010621	larp4aa	90	49.730	ENSSPUG00000016552	LARP4	50	64.323	Sphenodon_punctatus
ENSSDUG00000010621	larp4aa	95	50.702	ENSSPAG00000002172	larp4ab	55	61.975	Stegastes_partitus
ENSSDUG00000010621	larp4aa	87	95.588	ENSSPAG00000007222	larp4aa	94	95.588	Stegastes_partitus
ENSSDUG00000010621	larp4aa	95	48.652	ENSTGUG00000003479	LARP4	52	65.625	Taeniopygia_guttata
ENSSDUG00000010621	larp4aa	65	54.478	ENSTRUG00000007206	larp4ab	100	44.346	Takifugu_rubripes
ENSSDUG00000010621	larp4aa	95	78.732	ENSTNIG00000015109	larp4aa	99	78.468	Tetraodon_nigroviridis
ENSSDUG00000010621	larp4aa	95	45.558	ENSTNIG00000014571	larp4ab	57	58.191	Tetraodon_nigroviridis
ENSSDUG00000010621	larp4aa	79	52.754	ENSTBEG00000005167	LARP4	82	52.754	Tupaia_belangeri
ENSSDUG00000010621	larp4aa	95	48.030	ENSTTRG00000003764	LARP4	87	62.338	Tursiops_truncatus
ENSSDUG00000010621	larp4aa	69	67.178	ENSVVUG00000024717	LARP4	81	67.178	Vulpes_vulpes
ENSSDUG00000010621	larp4aa	100	79.877	ENSXCOG00000006387	larp4aa	100	80.123	Xiphophorus_couchianus
ENSSDUG00000010621	larp4aa	95	48.280	ENSXMAG00000002156	larp4ab	99	47.215	Xiphophorus_maculatus
ENSSDUG00000010621	larp4aa	100	86.380	ENSXMAG00000010519	larp4aa	100	85.644	Xiphophorus_maculatus