EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000010773 (Gene tree)
Gene ID: 111235254
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4631 bases
Position: chrBDQW01000478.1:1518285-1522915
Accession: 111235254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014747	MMR_HSR1	PF01926.23	3.6e-05	1	1
ENSSDUP00000014763	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015045	-	423	-	ENSSDUP00000014763	140 (aa)	-	-
ENSSDUT00000015028	-	1963	XM_022763654	ENSSDUP00000014747	198 (aa)	XP_022619375	UPI000BBEDA42

Gene Model

Click here to download ENSSDUG00000010773's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000010773	sar1ab	67	38.384	ENSSDUG00000000586	arl4aa	58	36.522
ENSSDUG00000010773	sar1ab	66	32.258	ENSSDUG00000004422	arl11	55	32.258
ENSSDUG00000010773	sar1ab	86	32.203	ENSSDUG00000017586	-	82	32.203
ENSSDUG00000010773	sar1ab	64	35.955	ENSSDUG00000013898	arl1	50	35.955
ENSSDUG00000010773	sar1ab	76	31.933	ENSSDUG00000006652	ARL6	79	32.215
ENSSDUG00000010773	sar1ab	82	33.913	ENSSDUG00000020599	-	60	33.913
ENSSDUG00000010773	sar1ab	87	30.233	ENSSDUG00000013976	arl3	88	30.233
ENSSDUG00000010773	sar1ab	66	36.842	ENSSDUG00000023723	-	93	34.615
ENSSDUG00000010773	sar1ab	64	33.708	ENSSDUG00000012261	arl5a	50	33.708
ENSSDUG00000010773	sar1ab	69	37.113	ENSSDUG00000017356	-	54	37.113
ENSSDUG00000010773	sar1ab	66	34.409	ENSSDUG00000005105	arf5	52	34.409
ENSSDUG00000010773	sar1ab	74	33.654	ENSSDUG00000017254	-	79	31.469
ENSSDUG00000010773	sar1ab	88	32.402	ENSSDUG00000013427	-	91	32.402
ENSSDUG00000010773	sar1ab	80	30.088	ENSSDUG00000012529	arl8bb	56	30.088
ENSSDUG00000010773	sar1ab	86	31.579	ENSSDUG00000004762	-	87	31.579
ENSSDUG00000010773	sar1ab	66	39.796	ENSSDUG00000011151	-	66	35.606
ENSSDUG00000010773	sar1ab	68	30.909	ENSSDUG00000007121	arfrp1	54	30.909
ENSSDUG00000010773	sar1ab	87	30.857	ENSSDUG00000014675	-	89	30.857
ENSSDUG00000010773	sar1ab	91	30.000	ENSSDUG00000021397	arl2	76	34.286
ENSSDUG00000010773	sar1ab	78	37.719	ENSSDUG00000012868	arl4cb	75	33.557
ENSSDUG00000010773	sar1ab	74	34.615	ENSSDUG00000007524	arf3b	77	32.168
ENSSDUG00000010773	sar1ab	73	33.103	ENSSDUG00000021055	arl8ba	61	33.103
ENSSDUG00000010773	sar1ab	86	31.818	ENSSDUG00000010935	arl4d	82	31.818
ENSSDUG00000010773	sar1ab	64	35.955	ENSSDUG00000007515	ARL5B	50	35.955
ENSSDUG00000010773	sar1ab	68	31.250	ENSSDUG00000000578	arl8a	68	34.375
ENSSDUG00000010773	sar1ab	74	34.615	ENSSDUG00000013041	-	78	32.168
ENSSDUG00000010773	sar1ab	64	37.079	ENSSDUG00000022640	arl5c	51	37.079
ENSSDUG00000010773	sar1ab	94	31.183	ENSSDUG00000003943	arl3l2	93	31.183
ENSSDUG00000010773	sar1ab	100	84.848	ENSSDUG00000020926	sar1b	100	84.848
ENSSDUG00000010773	sar1ab	74	35.238	ENSSDUG00000007780	arf2b	57	35.238
ENSSDUG00000010773	sar1ab	100	83.838	ENSSDUG00000019629	-	100	83.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010773	sar1ab	100	91.919	ENSACIG00000019827	sar1ab	100	91.919	Amphilophus_citrinellus
ENSSDUG00000010773	sar1ab	100	94.444	ENSAOCG00000022062	sar1ab	100	94.444	Amphiprion_ocellaris
ENSSDUG00000010773	sar1ab	100	94.444	ENSAPEG00000011525	sar1ab	100	94.444	Amphiprion_percula
ENSSDUG00000010773	sar1ab	100	96.970	ENSATEG00000003466	sar1ab	100	96.970	Anabas_testudineus
ENSSDUG00000010773	sar1ab	100	89.394	ENSACLG00000013053	sar1ab	100	89.394	Astatotilapia_calliptera
ENSSDUG00000010773	sar1ab	100	94.949	ENSCSEG00000004825	sar1ab	100	94.949	Cynoglossus_semilaevis
ENSSDUG00000010773	sar1ab	100	80.303	ENSCVAG00000006500	-	100	80.303	Cyprinodon_variegatus
ENSSDUG00000010773	sar1ab	100	91.919	ENSCVAG00000015162	sar1ab	100	91.919	Cyprinodon_variegatus
ENSSDUG00000010773	sar1ab	100	91.919	ENSDARG00000033320	sar1ab	100	91.919	Danio_rerio
ENSSDUG00000010773	sar1ab	100	94.949	ENSELUG00000024279	sar1ab	100	94.949	Esox_lucius
ENSSDUG00000010773	sar1ab	100	84.848	ENSELUG00000013652	sar1a	100	84.848	Esox_lucius
ENSSDUG00000010773	sar1ab	100	90.909	ENSFHEG00000021773	sar1ab	100	90.909	Fundulus_heteroclitus
ENSSDUG00000010773	sar1ab	100	81.818	ENSFHEG00000012352	-	100	81.818	Fundulus_heteroclitus
ENSSDUG00000010773	sar1ab	100	93.434	ENSGMOG00000012588	sar1ab	100	93.434	Gadus_morhua
ENSSDUG00000010773	sar1ab	100	92.424	ENSGAFG00000009702	sar1ab	100	92.424	Gambusia_affinis
ENSSDUG00000010773	sar1ab	100	81.818	ENSGAFG00000004846	-	97	85.217	Gambusia_affinis
ENSSDUG00000010773	sar1ab	100	95.455	ENSGACG00000008616	sar1ab	100	95.455	Gasterosteus_aculeatus
ENSSDUG00000010773	sar1ab	100	89.394	ENSHBUG00000021221	sar1ab	100	89.394	Haplochromis_burtoni
ENSSDUG00000010773	sar1ab	100	93.939	ENSHCOG00000002845	sar1ab	80	93.939	Hippocampus_comes
ENSSDUG00000010773	sar1ab	100	91.414	ENSKMAG00000018006	sar1ab	100	91.414	Kryptolebias_marmoratus
ENSSDUG00000010773	sar1ab	100	96.465	ENSLBEG00000001114	sar1ab	100	96.465	Labrus_bergylta
ENSSDUG00000010773	sar1ab	100	96.970	ENSMAMG00000021314	sar1ab	100	96.970	Mastacembelus_armatus
ENSSDUG00000010773	sar1ab	100	89.394	ENSMZEG00005027606	sar1ab	100	89.394	Maylandia_zebra
ENSSDUG00000010773	sar1ab	100	96.465	ENSMMOG00000010360	sar1ab	100	96.465	Mola_mola
ENSSDUG00000010773	sar1ab	100	95.960	ENSMALG00000005831	sar1ab	100	95.960	Monopterus_albus
ENSSDUG00000010773	sar1ab	100	89.899	ENSNBRG00000018772	sar1ab	100	89.899	Neolamprologus_brichardi
ENSSDUG00000010773	sar1ab	100	90.909	ENSONIG00000018509	sar1ab	100	90.909	Oreochromis_niloticus
ENSSDUG00000010773	sar1ab	100	82.828	ENSORLG00000009132	-	90	82.828	Oryzias_latipes
ENSSDUG00000010773	sar1ab	100	90.404	ENSORLG00000006779	sar1ab	67	90.404	Oryzias_latipes
ENSSDUG00000010773	sar1ab	100	82.828	ENSORLG00020007024	-	90	82.828	Oryzias_latipes_hni
ENSSDUG00000010773	sar1ab	100	89.899	ENSORLG00020005458	sar1ab	100	89.899	Oryzias_latipes_hni
ENSSDUG00000010773	sar1ab	100	82.323	ENSORLG00015006223	-	94	87.500	Oryzias_latipes_hsok
ENSSDUG00000010773	sar1ab	100	90.404	ENSORLG00015010542	sar1ab	100	90.404	Oryzias_latipes_hsok
ENSSDUG00000010773	sar1ab	100	91.919	ENSOMEG00000004948	sar1ab	100	91.919	Oryzias_melastigma
ENSSDUG00000010773	sar1ab	100	82.323	ENSOMEG00000012020	-	100	82.323	Oryzias_melastigma
ENSSDUG00000010773	sar1ab	100	87.374	ENSPKIG00000007615	sar1ab	100	87.374	Paramormyrops_kingsleyae
ENSSDUG00000010773	sar1ab	100	97.475	ENSPMGG00000013330	sar1ab	100	97.475	Periophthalmus_magnuspinnatus
ENSSDUG00000010773	sar1ab	100	92.929	ENSPFOG00000023432	sar1ab	100	92.929	Poecilia_formosa
ENSSDUG00000010773	sar1ab	100	92.929	ENSPLAG00000023705	sar1ab	100	92.929	Poecilia_latipinna
ENSSDUG00000010773	sar1ab	100	81.313	ENSPMEG00000001717	-	100	81.313	Poecilia_mexicana
ENSSDUG00000010773	sar1ab	100	92.929	ENSPMEG00000000559	sar1ab	100	92.929	Poecilia_mexicana
ENSSDUG00000010773	sar1ab	100	92.929	ENSPREG00000016098	sar1ab	100	92.929	Poecilia_reticulata
ENSSDUG00000010773	sar1ab	100	89.899	ENSPNYG00000011603	sar1ab	100	89.899	Pundamilia_nyererei
ENSSDUG00000010773	sar1ab	100	92.424	ENSPNAG00000008007	sar1ab	100	92.424	Pygocentrus_nattereri
ENSSDUG00000010773	sar1ab	100	89.394	ENSSFOG00015014010	sar1a	100	89.394	Scleropages_formosus
ENSSDUG00000010773	sar1ab	79	97.297	ENSSMAG00000020758	sar1ab	80	97.297	Scophthalmus_maximus
ENSSDUG00000010773	sar1ab	100	100.000	ENSSLDG00000025558	sar1ab	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000010773	sar1ab	100	94.444	ENSSPAG00000009194	sar1ab	100	94.444	Stegastes_partitus
ENSSDUG00000010773	sar1ab	100	94.949	ENSTRUG00000007269	sar1ab	100	94.949	Takifugu_rubripes
ENSSDUG00000010773	sar1ab	100	93.434	ENSTNIG00000008635	sar1ab	100	93.434	Tetraodon_nigroviridis
ENSSDUG00000010773	sar1ab	100	92.929	ENSXMAG00000003130	sar1ab	100	92.929	Xiphophorus_maculatus
ENSSDUG00000010773	sar1ab	100	82.323	ENSXMAG00000026223	SAR1A	100	82.323	Xiphophorus_maculatus