EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000010779 (Gene tree)
Gene ID: 111223075
Gene Symbol: nup153
Alias: fd23d09|si:ch211-153f2.5|wu:fd23d09
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 15699 bases
Position: chrBDQW01000110.1:6190683-6206381
Accession: 111223075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014861	zf-RanBP	PF00641.18	5.3e-36	1	4
ENSSDUP00000014861	zf-RanBP	PF00641.18	5.3e-36	2	4
ENSSDUP00000014861	zf-RanBP	PF00641.18	5.3e-36	3	4
ENSSDUP00000014861	zf-RanBP	PF00641.18	5.3e-36	4	4
ENSSDUP00000014798	zf-RanBP	PF00641.18	7.4e-36	1	4
ENSSDUP00000014798	zf-RanBP	PF00641.18	7.4e-36	2	4
ENSSDUP00000014798	zf-RanBP	PF00641.18	7.4e-36	3	4
ENSSDUP00000014798	zf-RanBP	PF00641.18	7.4e-36	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015083	-	4701	XM_022747094	ENSSDUP00000014798	1553 (aa)	XP_022602815	-
ENSSDUT00000015145	-	4302	-	ENSSDUP00000014861	1433 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000010779's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010779	nup153	99	40.076	ENSG00000124789	NUP153	59	48.707	Homo_sapiens
ENSSDUG00000010779	nup153	58	83.566	ENSAPOG00000019495	nup153	60	82.258	Acanthochromis_polyacanthus
ENSSDUG00000010779	nup153	99	40.990	ENSAMEG00000000721	NUP153	59	50.055	Ailuropoda_melanoleuca
ENSSDUG00000010779	nup153	100	74.543	ENSACIG00000010784	nup153	59	79.734	Amphilophus_citrinellus
ENSSDUG00000010779	nup153	100	79.690	ENSAOCG00000007098	nup153	100	79.159	Amphiprion_ocellaris
ENSSDUG00000010779	nup153	100	83.312	ENSAPEG00000012075	nup153	60	85.900	Amphiprion_percula
ENSSDUG00000010779	nup153	99	80.897	ENSATEG00000014134	nup153	93	84.768	Anabas_testudineus
ENSSDUG00000010779	nup153	98	38.670	ENSACAG00000004118	NUP153	58	44.801	Anolis_carolinensis
ENSSDUG00000010779	nup153	99	40.860	ENSANAG00000001808	NUP153	59	49.946	Aotus_nancymaae
ENSSDUG00000010779	nup153	100	79.231	ENSACLG00000016592	nup153	100	79.295	Astatotilapia_calliptera
ENSSDUG00000010779	nup153	100	54.954	ENSAMXG00000021025	nup153	58	63.345	Astyanax_mexicanus
ENSSDUG00000010779	nup153	99	40.970	ENSBTAG00000017128	NUP153	59	49.516	Bos_taurus
ENSSDUG00000010779	nup153	99	41.259	ENSCJAG00000006685	NUP153	59	50.000	Callithrix_jacchus
ENSSDUG00000010779	nup153	99	41.277	ENSCAFG00000010146	NUP153	59	49.138	Canis_familiaris
ENSSDUG00000010779	nup153	99	41.514	ENSCAFG00020010901	NUP153	59	49.785	Canis_lupus_dingo
ENSSDUG00000010779	nup153	98	40.738	ENSCHIG00000023764	NUP153	59	49.189	Capra_hircus
ENSSDUG00000010779	nup153	98	40.327	ENSTSYG00000001251	NUP153	58	48.724	Carlito_syrichta
ENSSDUG00000010779	nup153	99	42.041	ENSCPOG00000004007	NUP153	59	47.878	Cavia_porcellus
ENSSDUG00000010779	nup153	99	39.327	ENSCCAG00000024038	NUP153	58	46.955	Cebus_capucinus
ENSSDUG00000010779	nup153	99	41.309	ENSCATG00000041429	NUP153	59	49.729	Cercocebus_atys
ENSSDUG00000010779	nup153	99	41.511	ENSCLAG00000001915	NUP153	59	48.610	Chinchilla_lanigera
ENSSDUG00000010779	nup153	99	40.506	ENSCSAG00000007624	NUP153	59	49.674	Chlorocebus_sabaeus
ENSSDUG00000010779	nup153	55	40.476	ENSCHOG00000008316	-	62	40.856	Choloepus_hoffmanni
ENSSDUG00000010779	nup153	50	39.221	ENSCHOG00000007137	-	59	39.559	Choloepus_hoffmanni
ENSSDUG00000010779	nup153	57	38.799	ENSCHOG00000003510	-	62	39.559	Choloepus_hoffmanni
ENSSDUG00000010779	nup153	99	41.424	ENSCPBG00000008333	NUP153	87	45.465	Chrysemys_picta_bellii
ENSSDUG00000010779	nup153	99	39.440	ENSCANG00000033390	NUP153	58	46.861	Colobus_angolensis_palliatus
ENSSDUG00000010779	nup153	99	40.128	ENSCGRG00001021016	Nup153	59	48.478	Cricetulus_griseus_chok1gshd
ENSSDUG00000010779	nup153	98	40.078	ENSCGRG00000009244	Nup153	59	48.434	Cricetulus_griseus_crigri
ENSSDUG00000010779	nup153	100	70.089	ENSCSEG00000017912	nup153	61	75.978	Cynoglossus_semilaevis
ENSSDUG00000010779	nup153	94	71.506	ENSCVAG00000020646	nup153	99	69.361	Cyprinodon_variegatus
ENSSDUG00000010779	nup153	100	56.815	ENSDARG00000099972	nup153	60	66.057	Danio_rerio
ENSSDUG00000010779	nup153	99	39.757	ENSDNOG00000001153	NUP153	59	48.544	Dasypus_novemcinctus
ENSSDUG00000010779	nup153	99	40.848	ENSDORG00000001736	Nup153	60	48.537	Dipodomys_ordii
ENSSDUG00000010779	nup153	99	40.617	ENSEASG00005009945	NUP153	60	48.646	Equus_asinus_asinus
ENSSDUG00000010779	nup153	99	40.345	ENSECAG00000016010	NUP153	60	48.429	Equus_caballus
ENSSDUG00000010779	nup153	68	44.823	ENSEEUG00000010183	NUP153	69	47.671	Erinaceus_europaeus
ENSSDUG00000010779	nup153	99	57.530	ENSELUG00000019108	nup153	59	66.120	Esox_lucius
ENSSDUG00000010779	nup153	99	40.559	ENSFCAG00000011583	NUP153	60	48.387	Felis_catus
ENSSDUG00000010779	nup153	94	37.869	ENSFALG00000013388	NUP153	57	45.476	Ficedula_albicollis
ENSSDUG00000010779	nup153	98	80.676	ENSFHEG00000013401	nup153	62	81.473	Fundulus_heteroclitus
ENSSDUG00000010779	nup153	91	67.097	ENSGMOG00000010422	nup153	74	67.284	Gadus_morhua
ENSSDUG00000010779	nup153	99	40.090	ENSGALG00000012720	NUP153	60	47.645	Gallus_gallus
ENSSDUG00000010779	nup153	100	67.377	ENSGAFG00000010927	nup153	60	73.455	Gambusia_affinis
ENSSDUG00000010779	nup153	99	73.144	ENSGACG00000005389	nup153	61	79.868	Gasterosteus_aculeatus
ENSSDUG00000010779	nup153	99	41.300	ENSGAGG00000022386	NUP153	59	47.141	Gopherus_agassizii
ENSSDUG00000010779	nup153	99	40.494	ENSGGOG00000014261	NUP153	60	47.849	Gorilla_gorilla
ENSSDUG00000010779	nup153	100	79.564	ENSHBUG00000002944	nup153	100	79.116	Haplochromis_burtoni
ENSSDUG00000010779	nup153	99	40.840	ENSHGLG00000007924	NUP153	59	48.096	Heterocephalus_glaber_female
ENSSDUG00000010779	nup153	99	40.840	ENSHGLG00100001529	NUP153	59	48.096	Heterocephalus_glaber_male
ENSSDUG00000010779	nup153	100	62.435	ENSHCOG00000019361	nup153	60	68.301	Hippocampus_comes
ENSSDUG00000010779	nup153	100	54.753	ENSIPUG00000014605	nup153	100	54.077	Ictalurus_punctatus
ENSSDUG00000010779	nup153	98	40.362	ENSSTOG00000005807	NUP153	60	48.993	Ictidomys_tridecemlineatus
ENSSDUG00000010779	nup153	99	41.169	ENSJJAG00000016760	Nup153	59	48.218	Jaculus_jaculus
ENSSDUG00000010779	nup153	99	76.908	ENSKMAG00000006344	nup153	60	82.819	Kryptolebias_marmoratus
ENSSDUG00000010779	nup153	100	78.695	ENSLBEG00000002982	nup153	60	85.141	Labrus_bergylta
ENSSDUG00000010779	nup153	98	36.579	ENSLACG00000006480	NUP153	58	41.112	Latimeria_chalumnae
ENSSDUG00000010779	nup153	100	47.793	ENSLOCG00000008267	nup153	61	54.936	Lepisosteus_oculatus
ENSSDUG00000010779	nup153	99	40.088	ENSLAFG00000015905	NUP153	59	48.698	Loxodonta_africana
ENSSDUG00000010779	nup153	99	40.633	ENSMFAG00000045732	NUP153	59	49.403	Macaca_fascicularis
ENSSDUG00000010779	nup153	99	40.633	ENSMMUG00000001993	NUP153	59	49.620	Macaca_mulatta
ENSSDUG00000010779	nup153	99	40.696	ENSMNEG00000038011	NUP153	59	49.403	Macaca_nemestrina
ENSSDUG00000010779	nup153	99	40.993	ENSMLEG00000030776	NUP153	59	49.620	Mandrillus_leucophaeus
ENSSDUG00000010779	nup153	100	80.421	ENSMAMG00000013184	nup153	60	85.205	Mastacembelus_armatus
ENSSDUG00000010779	nup153	100	75.319	ENSMZEG00005004371	nup153	100	76.323	Maylandia_zebra
ENSSDUG00000010779	nup153	98	39.431	ENSMGAG00000003139	NUP153	59	46.837	Meleagris_gallopavo
ENSSDUG00000010779	nup153	99	40.092	ENSMAUG00000007737	Nup153	62	48.265	Mesocricetus_auratus
ENSSDUG00000010779	nup153	99	40.139	ENSMICG00000006089	NUP153	59	48.950	Microcebus_murinus
ENSSDUG00000010779	nup153	99	40.631	ENSMOCG00000007623	Nup153	59	48.313	Microtus_ochrogaster
ENSSDUG00000010779	nup153	81	79.363	ENSMMOG00000019049	nup153	90	79.618	Mola_mola
ENSSDUG00000010779	nup153	98	40.615	ENSMODG00000010951	NUP153	58	48.941	Monodelphis_domestica
ENSSDUG00000010779	nup153	100	68.979	ENSMALG00000013995	nup153	100	74.935	Monopterus_albus
ENSSDUG00000010779	nup153	99	40.381	MGP_CAROLIEiJ_G0018483	Nup153	59	47.939	Mus_caroli
ENSSDUG00000010779	nup153	99	40.753	ENSMUSG00000021374	Nup153	64	51.220	Mus_musculus
ENSSDUG00000010779	nup153	99	40.459	MGP_PahariEiJ_G0019551	Nup153	59	48.426	Mus_pahari
ENSSDUG00000010779	nup153	99	40.434	MGP_SPRETEiJ_G0019363	Nup153	59	47.722	Mus_spretus
ENSSDUG00000010779	nup153	99	39.228	ENSMLUG00000004775	NUP153	61	46.106	Myotis_lucifugus
ENSSDUG00000010779	nup153	99	40.000	ENSNGAG00000013817	Nup153	59	49.166	Nannospalax_galili
ENSSDUG00000010779	nup153	100	75.764	ENSNBRG00000012456	nup153	100	76.103	Neolamprologus_brichardi
ENSSDUG00000010779	nup153	99	41.184	ENSNLEG00000001141	NUP153	59	49.621	Nomascus_leucogenys
ENSSDUG00000010779	nup153	83	51.402	ENSMEUG00000012874	NUP153	53	73.171	Notamacropus_eugenii
ENSSDUG00000010779	nup153	81	44.456	ENSOPRG00000006221	NUP153	76	46.394	Ochotona_princeps
ENSSDUG00000010779	nup153	99	40.599	ENSODEG00000005620	NUP153	61	49.057	Octodon_degus
ENSSDUG00000010779	nup153	100	79.757	ENSONIG00000002524	nup153	100	79.628	Oreochromis_niloticus
ENSSDUG00000010779	nup153	98	41.331	ENSOANG00000011858	NUP153	58	50.667	Ornithorhynchus_anatinus
ENSSDUG00000010779	nup153	99	40.883	ENSOCUG00000003064	NUP153	60	47.996	Oryctolagus_cuniculus
ENSSDUG00000010779	nup153	100	71.611	ENSORLG00000012674	nup153	60	77.007	Oryzias_latipes
ENSSDUG00000010779	nup153	100	71.867	ENSORLG00020006026	nup153	60	77.223	Oryzias_latipes_hni
ENSSDUG00000010779	nup153	100	71.675	ENSORLG00015013823	nup153	60	76.790	Oryzias_latipes_hsok
ENSSDUG00000010779	nup153	99	71.660	ENSOMEG00000012062	nup153	60	77.680	Oryzias_melastigma
ENSSDUG00000010779	nup153	99	39.988	ENSOGAG00000014899	NUP153	60	47.639	Otolemur_garnettii
ENSSDUG00000010779	nup153	98	40.360	ENSOARG00000011514	NUP153	58	49.000	Ovis_aries
ENSSDUG00000010779	nup153	99	39.824	ENSPPAG00000029729	NUP153	59	49.186	Pan_paniscus
ENSSDUG00000010779	nup153	99	40.089	ENSPPRG00000006160	NUP153	60	48.387	Panthera_pardus
ENSSDUG00000010779	nup153	99	39.708	ENSPTIG00000017212	NUP153	60	47.849	Panthera_tigris_altaica
ENSSDUG00000010779	nup153	99	40.050	ENSPTRG00000017752	NUP153	92	49.349	Pan_troglodytes
ENSSDUG00000010779	nup153	99	40.886	ENSPANG00000015139	NUP153	59	49.729	Papio_anubis
ENSSDUG00000010779	nup153	98	40.639	ENSPSIG00000017226	NUP153	59	46.896	Pelodiscus_sinensis
ENSSDUG00000010779	nup153	100	65.665	ENSPMGG00000001716	nup153	59	71.251	Periophthalmus_magnuspinnatus
ENSSDUG00000010779	nup153	99	40.065	ENSPEMG00000020772	Nup153	59	48.531	Peromyscus_maniculatus_bairdii
ENSSDUG00000010779	nup153	57	46.226	ENSPMAG00000002487	-	100	44.340	Petromyzon_marinus
ENSSDUG00000010779	nup153	99	40.941	ENSPCIG00000029680	NUP153	59	48.915	Phascolarctos_cinereus
ENSSDUG00000010779	nup153	99	67.072	ENSPFOG00000013146	nup153	62	72.993	Poecilia_formosa
ENSSDUG00000010779	nup153	100	71.774	ENSPMEG00000021677	nup153	61	75.892	Poecilia_mexicana
ENSSDUG00000010779	nup153	100	72.148	ENSPREG00000007463	nup153	60	76.541	Poecilia_reticulata
ENSSDUG00000010779	nup153	99	39.591	ENSPPYG00000016259	NUP153	58	48.094	Pongo_abelii
ENSSDUG00000010779	nup153	99	39.232	ENSPCOG00000014488	NUP153	58	46.909	Propithecus_coquereli
ENSSDUG00000010779	nup153	94	39.630	ENSPVAG00000012632	NUP153	63	47.397	Pteropus_vampyrus
ENSSDUG00000010779	nup153	99	79.520	ENSPNYG00000011225	nup153	100	79.650	Pundamilia_nyererei
ENSSDUG00000010779	nup153	100	55.701	ENSPNAG00000024377	nup153	59	62.984	Pygocentrus_nattereri
ENSSDUG00000010779	nup153	99	40.151	ENSRNOG00000001456	Nup153	59	48.321	Rattus_norvegicus
ENSSDUG00000010779	nup153	99	40.575	ENSRBIG00000041878	NUP153	59	48.549	Rhinopithecus_bieti
ENSSDUG00000010779	nup153	98	40.933	ENSRROG00000029849	NUP153	60	49.892	Rhinopithecus_roxellana
ENSSDUG00000010779	nup153	99	40.290	ENSSBOG00000024532	NUP153	59	50.216	Saimiri_boliviensis_boliviensis
ENSSDUG00000010779	nup153	62	40.559	ENSSHAG00000016087	-	65	46.656	Sarcophilus_harrisii
ENSSDUG00000010779	nup153	100	51.088	ENSSFOG00015011040	nup153	61	57.846	Scleropages_formosus
ENSSDUG00000010779	nup153	100	81.274	ENSSMAG00000008418	nup153	59	85.161	Scophthalmus_maximus
ENSSDUG00000010779	nup153	87	95.020	ENSSLDG00000012692	nup153	100	91.240	Seriola_lalandi_dorsalis
ENSSDUG00000010779	nup153	99	40.807	ENSSPUG00000016687	NUP153	59	47.052	Sphenodon_punctatus
ENSSDUG00000010779	nup153	100	83.216	ENSSPAG00000014945	nup153	60	86.645	Stegastes_partitus
ENSSDUG00000010779	nup153	99	41.203	ENSSSCG00000026034	NUP153	60	48.975	Sus_scrofa
ENSSDUG00000010779	nup153	98	38.169	ENSTGUG00000005917	NUP153	60	44.839	Taeniopygia_guttata
ENSSDUG00000010779	nup153	99	69.260	ENSTRUG00000010163	nup153	59	73.341	Takifugu_rubripes
ENSSDUG00000010779	nup153	99	66.603	ENSTNIG00000009182	nup153	60	72.500	Tetraodon_nigroviridis
ENSSDUG00000010779	nup153	65	40.653	ENSTBEG00000004161	NUP153	55	45.135	Tupaia_belangeri
ENSSDUG00000010779	nup153	98	39.768	ENSUMAG00000017135	NUP153	59	47.450	Ursus_maritimus
ENSSDUG00000010779	nup153	99	41.019	ENSVPAG00000002072	NUP153	59	49.297	Vicugna_pacos
ENSSDUG00000010779	nup153	99	41.693	ENSVVUG00000003265	NUP153	59	49.838	Vulpes_vulpes
ENSSDUG00000010779	nup153	99	38.878	ENSXETG00000014197	nup153	61	43.609	Xenopus_tropicalis
ENSSDUG00000010779	nup153	100	67.492	ENSXCOG00000020098	nup153	60	74.223	Xiphophorus_couchianus
ENSSDUG00000010779	nup153	100	71.429	ENSXMAG00000003437	nup153	61	77.814	Xiphophorus_maculatus