EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000010820 (Gene tree)
Gene ID: 111239289
Gene Symbol: ehd3
Alias: si:ch211-147c1.2
Full Name: EH domain-containing protein 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 15555 bases
Position: chrBDQW01000025.1:9801186-9816740
Accession: 111239289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000014851	MMR_HSR1	PF01926.23	7.5e-09	1	1
ENSSDUP00000014827	MMR_HSR1	PF01926.23	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015110	-	3939	XM_022769133	ENSSDUP00000014827	535 (aa)	XP_022624854	UPI000BBEC33C
ENSSDUT00000015135	-	1596	-	ENSSDUP00000014851	531 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000010820's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000010820	ehd3	70	31.328	ENSSDUG00000009161	SRL	85	31.579
ENSSDUG00000010820	ehd3	99	75.797	ENSSDUG00000010947	ehd4	98	75.797
ENSSDUG00000010820	ehd3	69	34.286	ENSSDUG00000010808	srl	82	34.048
ENSSDUG00000010820	ehd3	99	60.259	ENSSDUG00000020042	-	99	60.259
ENSSDUG00000010820	ehd3	97	70.667	ENSSDUG00000000141	ehd2b	97	71.429
ENSSDUG00000010820	ehd3	98	85.496	ENSSDUG00000016436	ehd1a	98	85.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010820	ehd3	100	92.150	ENSG00000013016	EHD3	100	92.150	Homo_sapiens
ENSSDUG00000010820	ehd3	100	92.336	ENSAMEG00000004282	EHD3	100	92.336	Ailuropoda_melanoleuca
ENSSDUG00000010820	ehd3	100	98.879	ENSACIG00000015462	ehd3	100	98.879	Amphilophus_citrinellus
ENSSDUG00000010820	ehd3	100	87.382	ENSAOCG00000001953	-	100	87.382	Amphiprion_ocellaris
ENSSDUG00000010820	ehd3	100	98.879	ENSAPEG00000018380	ehd3	100	98.879	Amphiprion_percula
ENSSDUG00000010820	ehd3	100	99.439	ENSATEG00000002224	ehd3	100	99.439	Anabas_testudineus
ENSSDUG00000010820	ehd3	100	93.084	ENSAPLG00000010467	EHD3	100	93.084	Anas_platyrhynchos
ENSSDUG00000010820	ehd3	100	88.037	ENSACAG00000007103	EHD3	100	88.037	Anolis_carolinensis
ENSSDUG00000010820	ehd3	100	91.776	ENSANAG00000020422	EHD3	100	91.776	Aotus_nancymaae
ENSSDUG00000010820	ehd3	100	98.879	ENSACLG00000007581	ehd3	100	98.879	Astatotilapia_calliptera
ENSSDUG00000010820	ehd3	100	89.873	ENSAMXG00000042972	ehd3	100	89.873	Astyanax_mexicanus
ENSSDUG00000010820	ehd3	100	91.402	ENSBTAG00000001662	EHD3	100	91.402	Bos_taurus
ENSSDUG00000010820	ehd3	100	91.963	ENSCJAG00000003137	EHD3	100	91.963	Callithrix_jacchus
ENSSDUG00000010820	ehd3	100	92.336	ENSCAFG00000005348	EHD3	100	92.336	Canis_familiaris
ENSSDUG00000010820	ehd3	99	89.662	ENSCAFG00020023684	EHD3	98	89.662	Canis_lupus_dingo
ENSSDUG00000010820	ehd3	100	91.402	ENSCHIG00000017794	EHD3	100	91.402	Capra_hircus
ENSSDUG00000010820	ehd3	100	91.963	ENSTSYG00000036583	EHD3	100	91.963	Carlito_syrichta
ENSSDUG00000010820	ehd3	100	92.523	ENSCPOG00000034108	EHD3	100	92.523	Cavia_porcellus
ENSSDUG00000010820	ehd3	100	92.150	ENSCCAG00000029860	EHD3	100	92.150	Cebus_capucinus
ENSSDUG00000010820	ehd3	100	92.336	ENSCATG00000044604	EHD3	100	92.336	Cercocebus_atys
ENSSDUG00000010820	ehd3	100	92.523	ENSCLAG00000010983	EHD3	100	92.523	Chinchilla_lanigera
ENSSDUG00000010820	ehd3	100	92.336	ENSCSAG00000011254	EHD3	100	92.336	Chlorocebus_sabaeus
ENSSDUG00000010820	ehd3	100	92.150	ENSCPBG00000011884	EHD3	100	92.150	Chrysemys_picta_bellii
ENSSDUG00000010820	ehd3	100	92.336	ENSCANG00000024283	EHD3	100	92.336	Colobus_angolensis_palliatus
ENSSDUG00000010820	ehd3	100	92.150	ENSCGRG00001020979	Ehd3	100	92.150	Cricetulus_griseus_chok1gshd
ENSSDUG00000010820	ehd3	100	92.150	ENSCGRG00000013157	Ehd3	100	92.150	Cricetulus_griseus_crigri
ENSSDUG00000010820	ehd3	100	96.636	ENSCSEG00000019195	ehd3	100	96.636	Cynoglossus_semilaevis
ENSSDUG00000010820	ehd3	100	97.944	ENSCVAG00000016197	ehd3	100	97.944	Cyprinodon_variegatus
ENSSDUG00000010820	ehd3	100	94.766	ENSDARG00000007869	ehd3	100	94.766	Danio_rerio
ENSSDUG00000010820	ehd3	100	91.963	ENSDNOG00000039339	EHD3	100	91.963	Dasypus_novemcinctus
ENSSDUG00000010820	ehd3	100	92.336	ENSDORG00000024162	Ehd3	100	92.336	Dipodomys_ordii
ENSSDUG00000010820	ehd3	99	88.302	ENSETEG00000013323	EHD3	98	88.302	Echinops_telfairi
ENSSDUG00000010820	ehd3	100	92.523	ENSEASG00005008635	EHD3	100	92.523	Equus_asinus_asinus
ENSSDUG00000010820	ehd3	100	92.523	ENSECAG00000015195	EHD3	100	92.523	Equus_caballus
ENSSDUG00000010820	ehd3	88	92.116	ENSEEUG00000010447	EHD3	86	92.116	Erinaceus_europaeus
ENSSDUG00000010820	ehd3	99	95.122	ENSELUG00000023984	ehd3	99	95.122	Esox_lucius
ENSSDUG00000010820	ehd3	100	92.523	ENSFCAG00000029627	EHD3	100	92.523	Felis_catus
ENSSDUG00000010820	ehd3	100	92.710	ENSFALG00000011448	EHD3	100	92.710	Ficedula_albicollis
ENSSDUG00000010820	ehd3	100	92.523	ENSFDAG00000017946	EHD3	100	92.523	Fukomys_damarensis
ENSSDUG00000010820	ehd3	100	98.505	ENSFHEG00000018572	ehd3	100	98.505	Fundulus_heteroclitus
ENSSDUG00000010820	ehd3	99	94.569	ENSGMOG00000006447	ehd3	100	94.569	Gadus_morhua
ENSSDUG00000010820	ehd3	100	93.271	ENSGALG00000009086	EHD3	100	93.271	Gallus_gallus
ENSSDUG00000010820	ehd3	100	97.944	ENSGAFG00000005665	ehd3	100	97.944	Gambusia_affinis
ENSSDUG00000010820	ehd3	99	97.561	ENSGACG00000013160	ehd3	96	97.561	Gasterosteus_aculeatus
ENSSDUG00000010820	ehd3	100	92.150	ENSGAGG00000024938	EHD3	100	92.150	Gopherus_agassizii
ENSSDUG00000010820	ehd3	100	92.336	ENSGGOG00000003031	EHD3	100	92.336	Gorilla_gorilla
ENSSDUG00000010820	ehd3	100	98.879	ENSHBUG00000023210	ehd3	100	98.879	Haplochromis_burtoni
ENSSDUG00000010820	ehd3	100	92.336	ENSHGLG00000014803	EHD3	100	92.336	Heterocephalus_glaber_female
ENSSDUG00000010820	ehd3	100	92.336	ENSHGLG00100011636	EHD3	100	92.336	Heterocephalus_glaber_male
ENSSDUG00000010820	ehd3	100	97.383	ENSHCOG00000018418	ehd3	100	97.383	Hippocampus_comes
ENSSDUG00000010820	ehd3	100	94.579	ENSIPUG00000004603	Ehd3	100	94.579	Ictalurus_punctatus
ENSSDUG00000010820	ehd3	100	91.776	ENSSTOG00000028279	EHD3	100	91.776	Ictidomys_tridecemlineatus
ENSSDUG00000010820	ehd3	100	92.150	ENSJJAG00000013415	Ehd3	100	92.150	Jaculus_jaculus
ENSSDUG00000010820	ehd3	100	98.692	ENSKMAG00000018498	ehd3	100	98.692	Kryptolebias_marmoratus
ENSSDUG00000010820	ehd3	100	97.196	ENSLBEG00000009464	ehd3	100	97.196	Labrus_bergylta
ENSSDUG00000010820	ehd3	100	94.206	ENSLOCG00000016786	ehd3	100	94.206	Lepisosteus_oculatus
ENSSDUG00000010820	ehd3	99	91.557	ENSLAFG00000016215	EHD3	96	91.557	Loxodonta_africana
ENSSDUG00000010820	ehd3	100	91.963	ENSMFAG00000033132	EHD3	100	91.963	Macaca_fascicularis
ENSSDUG00000010820	ehd3	100	91.963	ENSMMUG00000003476	EHD3	100	91.963	Macaca_mulatta
ENSSDUG00000010820	ehd3	100	91.963	ENSMNEG00000041202	EHD3	100	91.963	Macaca_nemestrina
ENSSDUG00000010820	ehd3	100	92.336	ENSMLEG00000023912	EHD3	100	92.336	Mandrillus_leucophaeus
ENSSDUG00000010820	ehd3	100	99.252	ENSMAMG00000014744	ehd3	100	99.252	Mastacembelus_armatus
ENSSDUG00000010820	ehd3	100	98.879	ENSMZEG00005012558	ehd3	100	98.879	Maylandia_zebra
ENSSDUG00000010820	ehd3	100	92.523	ENSMAUG00000013239	Ehd3	100	92.523	Mesocricetus_auratus
ENSSDUG00000010820	ehd3	100	91.589	ENSMICG00000043744	EHD3	100	91.589	Microcebus_murinus
ENSSDUG00000010820	ehd3	100	91.963	ENSMOCG00000012572	Ehd3	100	91.963	Microtus_ochrogaster
ENSSDUG00000010820	ehd3	100	86.252	ENSMMOG00000015157	ehd3	100	86.252	Mola_mola
ENSSDUG00000010820	ehd3	100	92.710	ENSMODG00000015505	EHD3	100	92.710	Monodelphis_domestica
ENSSDUG00000010820	ehd3	100	98.692	ENSMALG00000015586	ehd3	100	98.692	Monopterus_albus
ENSSDUG00000010820	ehd3	100	92.336	MGP_CAROLIEiJ_G0021870	Ehd3	100	92.336	Mus_caroli
ENSSDUG00000010820	ehd3	100	92.336	ENSMUSG00000024065	Ehd3	100	92.336	Mus_musculus
ENSSDUG00000010820	ehd3	100	92.150	MGP_PahariEiJ_G0020857	Ehd3	100	92.150	Mus_pahari
ENSSDUG00000010820	ehd3	100	92.336	MGP_SPRETEiJ_G0022782	Ehd3	100	92.336	Mus_spretus
ENSSDUG00000010820	ehd3	89	92.647	ENSMPUG00000005148	EHD3	100	92.647	Mustela_putorius_furo
ENSSDUG00000010820	ehd3	100	89.159	ENSMLUG00000008050	EHD3	100	89.159	Myotis_lucifugus
ENSSDUG00000010820	ehd3	99	92.308	ENSNGAG00000014439	Ehd3	99	92.308	Nannospalax_galili
ENSSDUG00000010820	ehd3	100	98.692	ENSNBRG00000022653	ehd3	100	98.692	Neolamprologus_brichardi
ENSSDUG00000010820	ehd3	89	92.259	ENSNLEG00000015546	EHD3	100	92.259	Nomascus_leucogenys
ENSSDUG00000010820	ehd3	100	91.028	ENSOPRG00000012242	EHD3	98	91.028	Ochotona_princeps
ENSSDUG00000010820	ehd3	100	92.897	ENSODEG00000008117	EHD3	100	92.897	Octodon_degus
ENSSDUG00000010820	ehd3	100	99.065	ENSONIG00000000693	ehd3	100	99.065	Oreochromis_niloticus
ENSSDUG00000010820	ehd3	99	92.697	ENSOCUG00000001228	EHD3	99	92.697	Oryctolagus_cuniculus
ENSSDUG00000010820	ehd3	99	97.373	ENSORLG00000017118	ehd3	99	97.373	Oryzias_latipes
ENSSDUG00000010820	ehd3	99	97.373	ENSORLG00020002121	ehd3	99	97.373	Oryzias_latipes_hni
ENSSDUG00000010820	ehd3	99	97.373	ENSORLG00015020550	ehd3	99	97.373	Oryzias_latipes_hsok
ENSSDUG00000010820	ehd3	99	98.499	ENSOMEG00000000506	ehd3	99	98.499	Oryzias_melastigma
ENSSDUG00000010820	ehd3	100	91.776	ENSOGAG00000000397	EHD3	100	91.776	Otolemur_garnettii
ENSSDUG00000010820	ehd3	100	88.598	ENSOARG00000019698	EHD3	100	89.907	Ovis_aries
ENSSDUG00000010820	ehd3	100	92.336	ENSPPAG00000035288	EHD3	100	92.336	Pan_paniscus
ENSSDUG00000010820	ehd3	100	92.336	ENSPPRG00000002225	EHD3	100	92.336	Panthera_pardus
ENSSDUG00000010820	ehd3	100	92.523	ENSPTIG00000013343	EHD3	100	92.523	Panthera_tigris_altaica
ENSSDUG00000010820	ehd3	100	92.336	ENSPTRG00000011805	EHD3	100	92.336	Pan_troglodytes
ENSSDUG00000010820	ehd3	100	92.336	ENSPANG00000023120	EHD3	100	92.336	Papio_anubis
ENSSDUG00000010820	ehd3	100	95.140	ENSPKIG00000001422	ehd3	100	95.140	Paramormyrops_kingsleyae
ENSSDUG00000010820	ehd3	100	92.150	ENSPSIG00000017757	EHD3	100	92.150	Pelodiscus_sinensis
ENSSDUG00000010820	ehd3	100	97.944	ENSPMGG00000007882	ehd3	100	97.944	Periophthalmus_magnuspinnatus
ENSSDUG00000010820	ehd3	100	92.523	ENSPCIG00000008811	EHD3	100	92.523	Phascolarctos_cinereus
ENSSDUG00000010820	ehd3	100	99.065	ENSPFOG00000010935	ehd3	100	99.065	Poecilia_formosa
ENSSDUG00000010820	ehd3	100	98.879	ENSPLAG00000001005	ehd3	100	98.879	Poecilia_latipinna
ENSSDUG00000010820	ehd3	100	99.065	ENSPMEG00000006514	ehd3	100	99.065	Poecilia_mexicana
ENSSDUG00000010820	ehd3	100	98.879	ENSPREG00000012884	ehd3	100	98.879	Poecilia_reticulata
ENSSDUG00000010820	ehd3	100	92.336	ENSPPYG00000012514	EHD3	100	92.336	Pongo_abelii
ENSSDUG00000010820	ehd3	89	91.004	ENSPCAG00000008166	EHD3	100	91.004	Procavia_capensis
ENSSDUG00000010820	ehd3	100	91.963	ENSPCOG00000013548	EHD3	100	91.963	Propithecus_coquereli
ENSSDUG00000010820	ehd3	98	91.954	ENSPVAG00000002680	EHD3	100	91.954	Pteropus_vampyrus
ENSSDUG00000010820	ehd3	100	98.879	ENSPNYG00000003812	ehd3	100	98.879	Pundamilia_nyererei
ENSSDUG00000010820	ehd3	100	95.327	ENSPNAG00000028984	ehd3	100	95.327	Pygocentrus_nattereri
ENSSDUG00000010820	ehd3	100	92.710	ENSRNOG00000007744	Ehd3	100	92.710	Rattus_norvegicus
ENSSDUG00000010820	ehd3	99	92.655	ENSRBIG00000033877	EHD3	100	87.202	Rhinopithecus_bieti
ENSSDUG00000010820	ehd3	100	92.336	ENSRROG00000045782	EHD3	100	92.336	Rhinopithecus_roxellana
ENSSDUG00000010820	ehd3	100	91.963	ENSSBOG00000030935	EHD3	100	91.963	Saimiri_boliviensis_boliviensis
ENSSDUG00000010820	ehd3	100	92.336	ENSSHAG00000013011	EHD3	100	92.336	Sarcophilus_harrisii
ENSSDUG00000010820	ehd3	99	95.113	ENSSFOG00015014110	ehd3	99	95.211	Scleropages_formosus
ENSSDUG00000010820	ehd3	100	97.944	ENSSMAG00000008537	ehd3	100	97.944	Scophthalmus_maximus
ENSSDUG00000010820	ehd3	100	98.874	ENSSLDG00000025510	ehd3	100	98.874	Seriola_lalandi_dorsalis
ENSSDUG00000010820	ehd3	99	93.058	ENSSPUG00000014730	EHD3	99	93.058	Sphenodon_punctatus
ENSSDUG00000010820	ehd3	100	99.065	ENSSPAG00000013275	ehd3	100	99.065	Stegastes_partitus
ENSSDUG00000010820	ehd3	99	92.481	ENSSSCG00000035987	EHD3	99	92.481	Sus_scrofa
ENSSDUG00000010820	ehd3	100	91.045	ENSTGUG00000004572	EHD3	100	91.045	Taeniopygia_guttata
ENSSDUG00000010820	ehd3	100	97.944	ENSTRUG00000014338	ehd3	100	97.944	Takifugu_rubripes
ENSSDUG00000010820	ehd3	99	97.749	ENSTNIG00000010948	ehd3	99	97.749	Tetraodon_nigroviridis
ENSSDUG00000010820	ehd3	99	90.772	ENSTBEG00000010371	EHD3	97	90.772	Tupaia_belangeri
ENSSDUG00000010820	ehd3	100	87.850	ENSTTRG00000000167	EHD3	100	87.850	Tursiops_truncatus
ENSSDUG00000010820	ehd3	100	92.710	ENSUAMG00000022243	EHD3	100	92.710	Ursus_americanus
ENSSDUG00000010820	ehd3	99	91.760	ENSUMAG00000019931	EHD3	100	91.841	Ursus_maritimus
ENSSDUG00000010820	ehd3	100	92.336	ENSVVUG00000007563	EHD3	98	92.336	Vulpes_vulpes
ENSSDUG00000010820	ehd3	100	92.150	ENSXETG00000022070	ehd3	100	92.150	Xenopus_tropicalis
ENSSDUG00000010820	ehd3	100	98.505	ENSXMAG00000025261	ehd3	100	98.505	Xiphophorus_maculatus