EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000010944 (Gene tree)
Gene ID: 111237904
Gene Symbol: drosha
Alias: drosha|im:7150667|rnasen|zgc:158612
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 80458 bases
Position: chrBDQW01001124.1:3366426-3446883
Accession: 111237904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015085	Ribonuclease_3	PF00636.26	5.4e-43	1	2
ENSSDUP00000015085	Ribonuclease_3	PF00636.26	5.4e-43	2	2
ENSSDUP00000015106	Ribonuclease_3	PF00636.26	1.3e-42	1	2
ENSSDUP00000015106	Ribonuclease_3	PF00636.26	1.3e-42	2	2
ENSSDUP00000015085	dsrm	PF00035.26	9.2e-15	1	1
ENSSDUP00000015106	dsrm	PF00035.26	1.3e-14	1	1
ENSSDUP00000015085	Ribonucleas_3_3	PF14622.6	3.8e-44	1	2
ENSSDUP00000015085	Ribonucleas_3_3	PF14622.6	3.8e-44	2	2
ENSSDUP00000015106	Ribonucleas_3_3	PF14622.6	9.7e-44	1	2
ENSSDUP00000015106	Ribonucleas_3_3	PF14622.6	9.7e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015390	-	4251	XM_022767215	ENSSDUP00000015106	1354 (aa)	XP_022622936	UPI000BBE77EC
ENSSDUT00000015369	-	3066	-	ENSSDUP00000015085	1021 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000010944's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010944's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010944	drosha	95	91.237	ENSG00000113360	DROSHA	86	81.435	Homo_sapiens
ENSSDUG00000010944	drosha	95	91.273	ENSAMEG00000006000	DROSHA	87	77.586	Ailuropoda_melanoleuca
ENSSDUG00000010944	drosha	99	95.878	ENSACIG00000019308	drosha	99	96.410	Amphilophus_citrinellus
ENSSDUG00000010944	drosha	99	97.641	ENSATEG00000021939	drosha	100	91.808	Anabas_testudineus
ENSSDUG00000010944	drosha	95	90.965	ENSAPLG00000004372	DROSHA	100	74.679	Anas_platyrhynchos
ENSSDUG00000010944	drosha	95	90.041	ENSACAG00000007970	DROSHA	99	71.875	Anolis_carolinensis
ENSSDUG00000010944	drosha	99	85.560	ENSANAG00000020506	DROSHA	99	85.363	Aotus_nancymaae
ENSSDUG00000010944	drosha	100	92.688	ENSACLG00000012227	drosha	100	92.688	Astatotilapia_calliptera
ENSSDUG00000010944	drosha	95	92.784	ENSAMXG00000005582	drosha	100	81.117	Astyanax_mexicanus
ENSSDUG00000010944	drosha	95	91.443	ENSBTAG00000017551	DROSHA	87	81.688	Bos_taurus
ENSSDUG00000010944	drosha	84	35.615	WBGene00009163	drsh-1	76	35.791	Caenorhabditis_elegans
ENSSDUG00000010944	drosha	95	91.134	ENSCJAG00000018881	DROSHA	85	81.688	Callithrix_jacchus
ENSSDUG00000010944	drosha	61	95.694	ENSCAFG00000018939	-	100	95.694	Canis_familiaris
ENSSDUG00000010944	drosha	95	91.358	ENSCAFG00020017559	DROSHA	96	95.322	Canis_lupus_dingo
ENSSDUG00000010944	drosha	95	91.443	ENSCHIG00000022226	DROSHA	86	81.603	Capra_hircus
ENSSDUG00000010944	drosha	53	91.682	ENSCAPG00000015787	-	100	91.682	Cavia_aperea
ENSSDUG00000010944	drosha	95	91.179	ENSCPOG00000015051	DROSHA	75	91.340	Cavia_porcellus
ENSSDUG00000010944	drosha	99	88.703	ENSCCAG00000027283	DROSHA	99	88.507	Cebus_capucinus
ENSSDUG00000010944	drosha	99	87.525	ENSCATG00000016833	DROSHA	99	87.328	Cercocebus_atys
ENSSDUG00000010944	drosha	95	91.077	ENSCLAG00000013048	DROSHA	87	81.550	Chinchilla_lanigera
ENSSDUG00000010944	drosha	95	91.237	ENSCSAG00000017202	DROSHA	84	81.688	Chlorocebus_sabaeus
ENSSDUG00000010944	drosha	85	75.786	ENSCHOG00000011786	DROSHA	70	75.786	Choloepus_hoffmanni
ENSSDUG00000010944	drosha	95	91.417	ENSCPBG00000000467	DROSHA	100	76.128	Chrysemys_picta_bellii
ENSSDUG00000010944	drosha	50	63.039	ENSCING00000001525	-	99	63.039	Ciona_intestinalis
ENSSDUG00000010944	drosha	82	58.852	ENSCSAVG00000010638	-	99	59.569	Ciona_savignyi
ENSSDUG00000010944	drosha	99	87.525	ENSCANG00000035071	DROSHA	100	87.328	Colobus_angolensis_palliatus
ENSSDUG00000010944	drosha	98	89.122	ENSCGRG00001008885	Drosha	99	72.404	Cricetulus_griseus_chok1gshd
ENSSDUG00000010944	drosha	98	89.122	ENSCGRG00000006944	Drosha	99	72.404	Cricetulus_griseus_crigri
ENSSDUG00000010944	drosha	95	96.598	ENSCSEG00000001452	drosha	100	88.343	Cynoglossus_semilaevis
ENSSDUG00000010944	drosha	95	96.923	ENSCVAG00000004619	drosha	100	89.882	Cyprinodon_variegatus
ENSSDUG00000010944	drosha	95	95.140	ENSDARG00000055563	drosha	99	79.655	Danio_rerio
ENSSDUG00000010944	drosha	95	91.237	ENSDNOG00000001537	DROSHA	71	91.237	Dasypus_novemcinctus
ENSSDUG00000010944	drosha	95	91.031	ENSDORG00000005624	Drosha	86	81.693	Dipodomys_ordii
ENSSDUG00000010944	drosha	94	54.980	FBgn0026722	drosha	72	55.775	Drosophila_melanogaster
ENSSDUG00000010944	drosha	89	91.011	ENSETEG00000007814	DROSHA	62	91.011	Echinops_telfairi
ENSSDUG00000010944	drosha	67	81.645	ENSEBUG00000005974	-	98	82.635	Eptatretus_burgeri
ENSSDUG00000010944	drosha	96	90.928	ENSEASG00005007149	DROSHA	86	81.941	Equus_asinus_asinus
ENSSDUG00000010944	drosha	96	90.928	ENSECAG00000013578	DROSHA	84	81.941	Equus_caballus
ENSSDUG00000010944	drosha	95	86.867	ENSEEUG00000006351	DROSHA	70	86.907	Erinaceus_europaeus
ENSSDUG00000010944	drosha	91	92.144	ENSELUG00000015039	drosha	95	80.291	Esox_lucius
ENSSDUG00000010944	drosha	95	91.340	ENSFCAG00000000360	DROSHA	86	81.519	Felis_catus
ENSSDUG00000010944	drosha	95	90.176	ENSFALG00000012843	DROSHA	100	73.854	Ficedula_albicollis
ENSSDUG00000010944	drosha	96	90.612	ENSFDAG00000018414	DROSHA	86	81.466	Fukomys_damarensis
ENSSDUG00000010944	drosha	90	79.060	ENSFHEG00000003840	drosha	96	78.566	Fundulus_heteroclitus
ENSSDUG00000010944	drosha	95	90.965	ENSGALG00000012916	DROSHA	100	76.462	Gallus_gallus
ENSSDUG00000010944	drosha	95	97.314	ENSGAFG00000016853	drosha	98	86.712	Gambusia_affinis
ENSSDUG00000010944	drosha	95	91.313	ENSGAGG00000005621	DROSHA	100	76.260	Gopherus_agassizii
ENSSDUG00000010944	drosha	99	87.623	ENSGGOG00000011006	DROSHA	99	87.426	Gorilla_gorilla
ENSSDUG00000010944	drosha	96	86.718	ENSHBUG00000015907	drosha	99	86.255	Haplochromis_burtoni
ENSSDUG00000010944	drosha	96	90.714	ENSHGLG00000018873	DROSHA	85	81.297	Heterocephalus_glaber_female
ENSSDUG00000010944	drosha	96	90.714	ENSHGLG00100015793	DROSHA	85	81.297	Heterocephalus_glaber_male
ENSSDUG00000010944	drosha	95	93.326	ENSHCOG00000008454	drosha	97	86.763	Hippocampus_comes
ENSSDUG00000010944	drosha	95	91.031	ENSIPUG00000021202	drosha	100	77.566	Ictalurus_punctatus
ENSSDUG00000010944	drosha	99	86.328	ENSSTOG00000016323	DROSHA	100	95.194	Ictidomys_tridecemlineatus
ENSSDUG00000010944	drosha	96	91.030	ENSJJAG00000019758	Drosha	71	91.031	Jaculus_jaculus
ENSSDUG00000010944	drosha	99	96.615	ENSLBEG00000006606	drosha	100	87.684	Labrus_bergylta
ENSSDUG00000010944	drosha	95	92.673	ENSLACG00000005937	DROSHA	99	77.323	Latimeria_chalumnae
ENSSDUG00000010944	drosha	95	93.545	ENSLOCG00000012852	drosha	99	81.425	Lepisosteus_oculatus
ENSSDUG00000010944	drosha	96	90.631	ENSLAFG00000013831	DROSHA	97	77.358	Loxodonta_africana
ENSSDUG00000010944	drosha	95	91.237	ENSMFAG00000003055	DROSHA	86	80.119	Macaca_fascicularis
ENSSDUG00000010944	drosha	99	88.900	ENSMMUG00000012193	DROSHA	99	88.703	Macaca_mulatta
ENSSDUG00000010944	drosha	95	91.237	ENSMNEG00000037529	DROSHA	86	80.119	Macaca_nemestrina
ENSSDUG00000010944	drosha	95	84.433	ENSMLEG00000024167	DROSHA	86	76.118	Mandrillus_leucophaeus
ENSSDUG00000010944	drosha	100	94.907	ENSMAMG00000012613	drosha	100	94.907	Mastacembelus_armatus
ENSSDUG00000010944	drosha	100	92.614	ENSMZEG00005019487	drosha	100	92.614	Maylandia_zebra
ENSSDUG00000010944	drosha	95	90.862	ENSMGAG00000005087	DROSHA	100	76.243	Meleagris_gallopavo
ENSSDUG00000010944	drosha	98	89.122	ENSMAUG00000002863	Drosha	85	79.167	Mesocricetus_auratus
ENSSDUG00000010944	drosha	95	88.832	ENSMICG00000002241	DROSHA	99	84.159	Microcebus_murinus
ENSSDUG00000010944	drosha	95	91.134	ENSMOCG00000015044	Drosha	86	79.000	Microtus_ochrogaster
ENSSDUG00000010944	drosha	99	92.330	ENSMMOG00000004016	drosha	99	92.330	Mola_mola
ENSSDUG00000010944	drosha	97	87.537	ENSMODG00000004807	DROSHA	86	80.600	Monodelphis_domestica
ENSSDUG00000010944	drosha	99	97.744	ENSMALG00000010542	drosha	100	92.325	Monopterus_albus
ENSSDUG00000010944	drosha	95	90.787	MGP_CAROLIEiJ_G0019687	Drosha	95	90.825	Mus_caroli
ENSSDUG00000010944	drosha	95	91.192	ENSMUSG00000022191	Drosha	87	77.586	Mus_musculus
ENSSDUG00000010944	drosha	98	88.789	MGP_PahariEiJ_G0016063	Drosha	96	89.436	Mus_pahari
ENSSDUG00000010944	drosha	96	90.724	MGP_SPRETEiJ_G0020580	Drosha	95	90.928	Mus_spretus
ENSSDUG00000010944	drosha	95	91.443	ENSMPUG00000015237	DROSHA	87	77.732	Mustela_putorius_furo
ENSSDUG00000010944	drosha	96	89.806	ENSMLUG00000002581	DROSHA	70	90.206	Myotis_lucifugus
ENSSDUG00000010944	drosha	96	84.098	ENSNGAG00000017329	Drosha	85	72.190	Nannospalax_galili
ENSSDUG00000010944	drosha	96	77.064	ENSNBRG00000001870	drosha	99	80.488	Neolamprologus_brichardi
ENSSDUG00000010944	drosha	99	87.525	ENSNLEG00000013963	DROSHA	99	87.328	Nomascus_leucogenys
ENSSDUG00000010944	drosha	88	74.308	ENSMEUG00000002029	DROSHA	75	74.419	Notamacropus_eugenii
ENSSDUG00000010944	drosha	86	86.186	ENSOPRG00000010845	DROSHA	72	86.135	Ochotona_princeps
ENSSDUG00000010944	drosha	95	90.872	ENSODEG00000001911	DROSHA	87	77.441	Octodon_degus
ENSSDUG00000010944	drosha	95	96.718	ENSONIG00000006578	drosha	99	87.920	Oreochromis_niloticus
ENSSDUG00000010944	drosha	75	77.139	ENSOANG00000015744	-	100	77.139	Ornithorhynchus_anatinus
ENSSDUG00000010944	drosha	95	91.340	ENSOCUG00000000367	DROSHA	97	74.782	Oryctolagus_cuniculus
ENSSDUG00000010944	drosha	95	96.070	ENSORLG00000013592	drosha	100	85.568	Oryzias_latipes
ENSSDUG00000010944	drosha	99	92.836	ENSORLG00020002854	drosha	98	94.623	Oryzias_latipes_hni
ENSSDUG00000010944	drosha	99	94.123	ENSORLG00015003156	drosha	97	95.760	Oryzias_latipes_hsok
ENSSDUG00000010944	drosha	95	95.657	ENSOMEG00000001062	drosha	100	86.041	Oryzias_melastigma
ENSSDUG00000010944	drosha	95	89.186	ENSOGAG00000005424	DROSHA	79	89.186	Otolemur_garnettii
ENSSDUG00000010944	drosha	95	91.237	ENSPPAG00000037526	DROSHA	99	86.149	Pan_paniscus
ENSSDUG00000010944	drosha	95	91.340	ENSPPRG00000002687	DROSHA	86	81.519	Panthera_pardus
ENSSDUG00000010944	drosha	95	91.340	ENSPTIG00000017523	DROSHA	86	81.519	Panthera_tigris_altaica
ENSSDUG00000010944	drosha	95	91.237	ENSPTRG00000016762	DROSHA	86	81.435	Pan_troglodytes
ENSSDUG00000010944	drosha	95	91.237	ENSPANG00000003027	DROSHA	86	80.119	Papio_anubis
ENSSDUG00000010944	drosha	95	94.021	ENSPKIG00000011514	drosha	100	83.493	Paramormyrops_kingsleyae
ENSSDUG00000010944	drosha	95	91.031	ENSPEMG00000000607	Drosha	99	72.779	Peromyscus_maniculatus_bairdii
ENSSDUG00000010944	drosha	96	90.890	ENSPCIG00000006010	DROSHA	85	82.173	Phascolarctos_cinereus
ENSSDUG00000010944	drosha	95	97.216	ENSPREG00000022302	drosha	98	86.667	Poecilia_reticulata
ENSSDUG00000010944	drosha	95	91.237	ENSPPYG00000015370	DROSHA	87	77.750	Pongo_abelii
ENSSDUG00000010944	drosha	95	72.268	ENSPCAG00000007190	DROSHA	87	62.644	Procavia_capensis
ENSSDUG00000010944	drosha	99	85.069	ENSPCOG00000028511	DROSHA	99	84.872	Propithecus_coquereli
ENSSDUG00000010944	drosha	95	86.335	ENSPVAG00000013167	DROSHA	87	73.706	Pteropus_vampyrus
ENSSDUG00000010944	drosha	99	93.627	ENSPNYG00000000398	drosha	100	93.333	Pundamilia_nyererei
ENSSDUG00000010944	drosha	95	94.416	ENSPNAG00000011876	drosha	94	90.643	Pygocentrus_nattereri
ENSSDUG00000010944	drosha	95	90.994	ENSRNOG00000013451	Drosha	85	78.881	Rattus_norvegicus
ENSSDUG00000010944	drosha	95	89.907	ENSRBIG00000032786	DROSHA	99	85.069	Rhinopithecus_bieti
ENSSDUG00000010944	drosha	95	91.237	ENSRROG00000028199	DROSHA	85	81.688	Rhinopithecus_roxellana
ENSSDUG00000010944	drosha	96	90.631	ENSSBOG00000024008	DROSHA	99	86.935	Saimiri_boliviensis_boliviensis
ENSSDUG00000010944	drosha	99	88.759	ENSSHAG00000015198	DROSHA	98	88.661	Sarcophilus_harrisii
ENSSDUG00000010944	drosha	97	91.759	ENSSFOG00015009776	drosha	90	87.662	Scleropages_formosus
ENSSDUG00000010944	drosha	100	93.456	ENSSMAG00000008069	drosha	100	93.456	Scophthalmus_maximus
ENSSDUG00000010944	drosha	100	99.902	ENSSLDG00000025271	drosha	100	99.902	Seriola_lalandi_dorsalis
ENSSDUG00000010944	drosha	87	81.579	ENSSARG00000004436	-	65	81.579	Sorex_araneus
ENSSDUG00000010944	drosha	95	86.143	ENSSPUG00000006902	DROSHA	100	71.968	Sphenodon_punctatus
ENSSDUG00000010944	drosha	95	91.443	ENSSSCG00000016809	DROSHA	100	75.340	Sus_scrofa
ENSSDUG00000010944	drosha	95	89.669	ENSTGUG00000001955	DROSHA	100	72.560	Taeniopygia_guttata
ENSSDUG00000010944	drosha	87	95.147	ENSTRUG00000017778	drosha	97	87.905	Takifugu_rubripes
ENSSDUG00000010944	drosha	98	95.889	ENSTNIG00000008688	drosha	97	96.304	Tetraodon_nigroviridis
ENSSDUG00000010944	drosha	91	82.524	ENSTBEG00000000537	DROSHA	99	65.058	Tupaia_belangeri
ENSSDUG00000010944	drosha	95	90.872	ENSTTRG00000004210	DROSHA	85	78.613	Tursiops_truncatus
ENSSDUG00000010944	drosha	95	91.237	ENSUAMG00000025257	DROSHA	86	81.435	Ursus_americanus
ENSSDUG00000010944	drosha	95	91.237	ENSUMAG00000014097	DROSHA	95	95.175	Ursus_maritimus
ENSSDUG00000010944	drosha	95	85.773	ENSVPAG00000011260	DROSHA	88	85.773	Vicugna_pacos
ENSSDUG00000010944	drosha	95	91.340	ENSVVUG00000022212	DROSHA	99	95.044	Vulpes_vulpes
ENSSDUG00000010944	drosha	95	86.495	ENSXETG00000016701	drosha	98	71.175	Xenopus_tropicalis