EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000010976 (Gene tree)
Gene ID: 111239083
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 11102 bases
Position: chrBDQW01001850.1:279356-290457
Accession: 111239083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015037	RRM_1	PF00076.22	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015321	-	3452	XM_022768853	ENSSDUP00000015037	617 (aa)	XP_022624574	UPI000BBEE37B

Gene Model

Click here to download ENSSDUG00000010976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000010976	-	54	31.928	ENSSDUG00000008651	zgc:123010	50	31.722
ENSSDUG00000010976	-	67	41.972	ENSSDUG00000003213	si:dkey-33c12.4	63	43.032

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010976	-	59	39.437	ENSAPOG00000001034	-	63	39.437	Acanthochromis_polyacanthus
ENSSDUG00000010976	-	75	36.701	ENSAPOG00000005058	si:dkey-33c12.4	53	43.666	Acanthochromis_polyacanthus
ENSSDUG00000010976	-	54	30.422	ENSAPOG00000019633	zgc:123010	54	30.422	Acanthochromis_polyacanthus
ENSSDUG00000010976	-	99	65.971	ENSAPOG00000022403	-	94	65.650	Acanthochromis_polyacanthus
ENSSDUG00000010976	-	54	30.514	ENSAOCG00000005910	zgc:123010	50	30.514	Amphiprion_ocellaris
ENSSDUG00000010976	-	99	66.667	ENSAOCG00000000431	-	94	66.400	Amphiprion_ocellaris
ENSSDUG00000010976	-	57	43.626	ENSAOCG00000020066	si:dkey-33c12.4	52	43.562	Amphiprion_ocellaris
ENSSDUG00000010976	-	99	66.348	ENSAPEG00000023603	-	94	65.710	Amphiprion_percula
ENSSDUG00000010976	-	54	30.514	ENSAPEG00000014305	zgc:123010	53	30.514	Amphiprion_percula
ENSSDUG00000010976	-	55	35.656	ENSATEG00000001220	zgc:123010	67	33.762	Anabas_testudineus
ENSSDUG00000010976	-	99	68.463	ENSATEG00000018302	-	94	72.139	Anabas_testudineus
ENSSDUG00000010976	-	62	42.857	ENSATEG00000018885	si:dkey-33c12.4	60	42.857	Anabas_testudineus
ENSSDUG00000010976	-	99	63.099	ENSACLG00000003019	-	99	64.058	Astatotilapia_calliptera
ENSSDUG00000010976	-	72	37.263	ENSACLG00000014192	si:dkey-33c12.4	64	40.749	Astatotilapia_calliptera
ENSSDUG00000010976	-	58	33.019	ENSACLG00000012346	-	57	33.493	Astatotilapia_calliptera
ENSSDUG00000010976	-	76	45.684	ENSAMXG00000010871	si:dkey-33c12.4	57	50.000	Astyanax_mexicanus
ENSSDUG00000010976	-	60	35.027	ENSCPBG00000024454	-	50	35.356	Chrysemys_picta_bellii
ENSSDUG00000010976	-	82	61.027	ENSCSEG00000002755	-	94	55.428	Cynoglossus_semilaevis
ENSSDUG00000010976	-	51	43.849	ENSCVAG00000006564	-	60	39.231	Cyprinodon_variegatus
ENSSDUG00000010976	-	54	31.532	ENSCVAG00000013288	zgc:123010	50	31.532	Cyprinodon_variegatus
ENSSDUG00000010976	-	99	58.280	ENSCVAG00000004187	-	99	58.654	Cyprinodon_variegatus
ENSSDUG00000010976	-	75	45.342	ENSDARG00000057890	si:dkey-33c12.4	58	48.166	Danio_rerio
ENSSDUG00000010976	-	50	31.290	ENSDARG00000039082	zgc:123010	50	31.290	Danio_rerio
ENSSDUG00000010976	-	62	33.594	ENSEBUG00000001368	-	56	33.763	Eptatretus_burgeri
ENSSDUG00000010976	-	87	44.771	ENSELUG00000001633	-	90	42.581	Esox_lucius
ENSSDUG00000010976	-	83	39.011	ENSELUG00000002009	si:dkey-33c12.4	87	37.922	Esox_lucius
ENSSDUG00000010976	-	50	44.514	ENSFHEG00000005521	si:dkey-33c12.4	59	40.000	Fundulus_heteroclitus
ENSSDUG00000010976	-	95	58.070	ENSFHEG00000009983	-	96	59.060	Fundulus_heteroclitus
ENSSDUG00000010976	-	51	35.377	ENSGMOG00000018473	zgc:123010	76	35.377	Gadus_morhua
ENSSDUG00000010976	-	60	30.585	ENSGALG00000036747	TTC31	62	30.585	Gallus_gallus
ENSSDUG00000010976	-	50	30.449	ENSGAFG00000009373	zgc:123010	56	32.459	Gambusia_affinis
ENSSDUG00000010976	-	99	60.925	ENSGAFG00000016594	-	95	62.041	Gambusia_affinis
ENSSDUG00000010976	-	54	31.642	ENSGACG00000007620	zgc:123010	70	31.343	Gasterosteus_aculeatus
ENSSDUG00000010976	-	72	37.185	ENSHBUG00000010735	si:dkey-33c12.4	70	36.842	Haplochromis_burtoni
ENSSDUG00000010976	-	58	33.019	ENSHBUG00000016720	-	57	33.493	Haplochromis_burtoni
ENSSDUG00000010976	-	88	42.806	ENSIPUG00000005998	si:dkey-33c12.4	85	41.468	Ictalurus_punctatus
ENSSDUG00000010976	-	99	61.821	ENSKMAG00000006468	-	96	61.981	Kryptolebias_marmoratus
ENSSDUG00000010976	-	52	43.653	ENSKMAG00000016610	si:dkey-33c12.4	54	41.061	Kryptolebias_marmoratus
ENSSDUG00000010976	-	99	60.096	ENSLBEG00000028046	-	94	58.682	Labrus_bergylta
ENSSDUG00000010976	-	52	42.368	ENSLBEG00000021088	-	50	42.249	Labrus_bergylta
ENSSDUG00000010976	-	52	42.121	ENSLBEG00000017203	-	52	42.121	Labrus_bergylta
ENSSDUG00000010976	-	54	31.928	ENSLBEG00000023984	zgc:123010	50	31.928	Labrus_bergylta
ENSSDUG00000010976	-	51	36.709	ENSLACG00000009001	zgc:123010	61	36.709	Latimeria_chalumnae
ENSSDUG00000010976	-	81	33.270	ENSLACG00000004602	-	71	35.463	Latimeria_chalumnae
ENSSDUG00000010976	-	71	44.731	ENSLOCG00000001861	-	68	46.526	Lepisosteus_oculatus
ENSSDUG00000010976	-	56	33.962	ENSMAMG00000002460	-	68	33.962	Mastacembelus_armatus
ENSSDUG00000010976	-	72	39.602	ENSMAMG00000000111	si:dkey-33c12.4	65	39.381	Mastacembelus_armatus
ENSSDUG00000010976	-	56	33.491	ENSMAMG00000002377	-	65	33.491	Mastacembelus_armatus
ENSSDUG00000010976	-	50	36.620	ENSMAMG00000001145	zgc:123010	67	36.620	Mastacembelus_armatus
ENSSDUG00000010976	-	99	64.000	ENSMAMG00000004311	-	99	62.880	Mastacembelus_armatus
ENSSDUG00000010976	-	72	37.053	ENSMZEG00005014276	si:dkey-33c12.4	70	38.302	Maylandia_zebra
ENSSDUG00000010976	-	99	64.537	ENSMZEG00005000585	-	99	64.856	Maylandia_zebra
ENSSDUG00000010976	-	58	33.491	ENSMZEG00005014740	-	71	33.491	Maylandia_zebra
ENSSDUG00000010976	-	61	30.933	ENSMALG00000017698	zgc:123010	55	30.933	Monopterus_albus
ENSSDUG00000010976	-	99	68.203	ENSMALG00000003167	-	94	67.091	Monopterus_albus
ENSSDUG00000010976	-	51	46.749	ENSMALG00000002265	si:dkey-33c12.4	61	41.975	Monopterus_albus
ENSSDUG00000010976	-	51	36.620	ENSONIG00000018353	zgc:123010	58	36.620	Oreochromis_niloticus
ENSSDUG00000010976	-	99	65.391	ENSONIG00000007538	-	95	80.682	Oreochromis_niloticus
ENSSDUG00000010976	-	54	31.024	ENSORLG00000007675	zgc:123010	55	31.024	Oryzias_latipes
ENSSDUG00000010976	-	99	57.097	ENSORLG00000030385	-	95	57.212	Oryzias_latipes
ENSSDUG00000010976	-	53	41.994	ENSORLG00000029651	si:dkey-33c12.4	55	41.143	Oryzias_latipes
ENSSDUG00000010976	-	56	40.678	ENSORLG00020008750	si:dkey-33c12.4	51	41.143	Oryzias_latipes_hni
ENSSDUG00000010976	-	54	31.928	ENSORLG00020003457	zgc:123010	56	31.928	Oryzias_latipes_hni
ENSSDUG00000010976	-	99	57.576	ENSORLG00015008400	-	95	57.692	Oryzias_latipes_hsok
ENSSDUG00000010976	-	54	30.816	ENSORLG00015008373	zgc:123010	50	30.514	Oryzias_latipes_hsok
ENSSDUG00000010976	-	54	30.422	ENSOMEG00000003408	zgc:123010	50	30.120	Oryzias_melastigma
ENSSDUG00000010976	-	73	34.091	ENSOMEG00000008913	-	72	33.817	Oryzias_melastigma
ENSSDUG00000010976	-	99	59.300	ENSOMEG00000009428	-	95	59.744	Oryzias_melastigma
ENSSDUG00000010976	-	82	44.123	ENSPKIG00000011819	-	63	44.518	Paramormyrops_kingsleyae
ENSSDUG00000010976	-	75	65.319	ENSPFOG00000017092	-	95	65.823	Poecilia_formosa
ENSSDUG00000010976	-	52	44.910	ENSPLAG00000022537	si:dkey-33c12.4	50	43.976	Poecilia_latipinna
ENSSDUG00000010976	-	99	61.882	ENSPMEG00000009905	-	96	63.434	Poecilia_mexicana
ENSSDUG00000010976	-	99	61.120	ENSPREG00000016861	-	96	63.057	Poecilia_reticulata
ENSSDUG00000010976	-	99	64.377	ENSPNYG00000001047	-	99	64.696	Pundamilia_nyererei
ENSSDUG00000010976	-	72	37.053	ENSPNYG00000018262	si:dkey-33c12.4	61	41.190	Pundamilia_nyererei
ENSSDUG00000010976	-	63	49.618	ENSPNAG00000018386	si:dkey-33c12.4	68	46.154	Pygocentrus_nattereri
ENSSDUG00000010976	-	76	42.431	ENSSFOG00015009199	-	58	46.649	Scleropages_formosus
ENSSDUG00000010976	-	63	47.815	ENSSFOG00015005186	-	56	48.849	Scleropages_formosus
ENSSDUG00000010976	-	99	72.464	ENSSMAG00000010960	-	95	72.947	Scophthalmus_maximus
ENSSDUG00000010976	-	83	36.314	ENSSMAG00000008147	si:dkey-33c12.4	51	43.956	Scophthalmus_maximus
ENSSDUG00000010976	-	54	31.722	ENSSLDG00000019386	zgc:123010	52	31.722	Seriola_lalandi_dorsalis
ENSSDUG00000010976	-	63	41.975	ENSSLDG00000009448	si:dkey-33c12.4	59	42.543	Seriola_lalandi_dorsalis
ENSSDUG00000010976	-	97	97.987	ENSSLDG00000012846	-	100	97.987	Seriola_lalandi_dorsalis
ENSSDUG00000010976	-	64	36.620	ENSSPAG00000013621	zgc:123010	52	36.667	Stegastes_partitus
ENSSDUG00000010976	-	53	43.844	ENSSPAG00000022577	-	54	42.487	Stegastes_partitus
ENSSDUG00000010976	-	99	66.292	ENSSPAG00000004843	-	94	66.292	Stegastes_partitus
ENSSDUG00000010976	-	99	43.134	ENSTRUG00000000057	-	94	42.208	Takifugu_rubripes
ENSSDUG00000010976	-	54	43.391	ENSXMAG00000018535	si:dkey-33c12.4	56	41.885	Xiphophorus_maculatus
ENSSDUG00000010976	-	51	31.847	ENSXMAG00000002598	zgc:123010	55	31.173	Xiphophorus_maculatus