EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000010997 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8009 bases
Position: chrBDQW01000191.1:4410852-4418860
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015061	S10_plectin	PF03501.15	7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015345	-	507	-	ENSSDUP00000015061	168 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000010997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000010997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000010997	-	92	56.410	ENSSDUG00000011052	-	95	56.410
ENSSDUG00000010997	-	59	66.337	ENSSDUG00000018963	rps10	96	49.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000010997	-	83	80.576	ENSAPOG00000014059	-	94	80.576	Acanthochromis_polyacanthus
ENSSDUG00000010997	-	63	60.952	ENSAPOG00000016494	-	54	60.952	Acanthochromis_polyacanthus
ENSSDUG00000010997	-	81	91.176	ENSACIG00000013806	-	76	91.176	Amphilophus_citrinellus
ENSSDUG00000010997	-	71	60.833	ENSACIG00000019704	-	58	60.833	Amphilophus_citrinellus
ENSSDUG00000010997	-	66	63.063	ENSAOCG00000007730	-	65	63.063	Amphiprion_ocellaris
ENSSDUG00000010997	-	81	88.235	ENSAOCG00000011000	-	79	88.235	Amphiprion_ocellaris
ENSSDUG00000010997	-	64	91.667	ENSAPEG00000019531	-	61	91.667	Amphiprion_percula
ENSSDUG00000010997	-	52	57.955	ENSAPEG00000017745	-	56	57.955	Amphiprion_percula
ENSSDUG00000010997	-	61	69.608	ENSATEG00000004340	-	72	69.608	Anabas_testudineus
ENSSDUG00000010997	-	73	59.836	ENSACLG00000001013	-	67	59.836	Astatotilapia_calliptera
ENSSDUG00000010997	-	74	82.400	ENSAMXG00000037914	-	75	82.400	Astyanax_mexicanus
ENSSDUG00000010997	-	56	54.255	WBGene00004479	rps-10	62	54.255	Caenorhabditis_elegans
ENSSDUG00000010997	-	61	61.165	ENSCING00000006180	-	64	61.165	Ciona_intestinalis
ENSSDUG00000010997	-	81	86.029	ENSCSEG00000009179	-	80	86.029	Cynoglossus_semilaevis
ENSSDUG00000010997	-	60	56.436	FBgn0027494	RpS10a	61	56.436	Drosophila_melanogaster
ENSSDUG00000010997	-	57	63.158	FBgn0285947	RpS10b	59	63.158	Drosophila_melanogaster
ENSSDUG00000010997	-	61	55.357	ENSEBUG00000015221	-	73	55.357	Eptatretus_burgeri
ENSSDUG00000010997	-	75	65.079	ENSEASG00005009727	-	53	65.079	Equus_asinus_asinus
ENSSDUG00000010997	-	81	85.294	ENSFHEG00000008769	-	85	85.294	Fundulus_heteroclitus
ENSSDUG00000010997	-	75	88.095	ENSGAFG00000001335	-	65	88.095	Gambusia_affinis
ENSSDUG00000010997	-	82	89.781	ENSHBUG00000023819	-	83	89.781	Haplochromis_burtoni
ENSSDUG00000010997	-	73	59.836	ENSHBUG00000018067	-	67	59.836	Haplochromis_burtoni
ENSSDUG00000010997	-	79	66.418	ENSLBEG00000020432	-	84	66.418	Labrus_bergylta
ENSSDUG00000010997	-	74	67.200	ENSLACG00000010998	-	72	67.200	Latimeria_chalumnae
ENSSDUG00000010997	-	73	59.836	ENSMZEG00005026198	-	67	59.836	Maylandia_zebra
ENSSDUG00000010997	-	82	89.781	ENSMZEG00005007838	-	83	89.781	Maylandia_zebra
ENSSDUG00000010997	-	68	77.236	ENSMMOG00000003228	-	69	77.869	Mola_mola
ENSSDUG00000010997	-	90	57.516	ENSMMOG00000014380	-	75	57.516	Mola_mola
ENSSDUG00000010997	-	73	61.475	ENSMALG00000015614	-	76	61.475	Monopterus_albus
ENSSDUG00000010997	-	75	92.857	ENSNBRG00000008848	-	92	91.729	Neolamprologus_brichardi
ENSSDUG00000010997	-	80	55.224	ENSNBRG00000016554	-	74	55.224	Neolamprologus_brichardi
ENSSDUG00000010997	-	79	72.932	ENSPKIG00000013061	-	73	72.932	Paramormyrops_kingsleyae
ENSSDUG00000010997	-	95	71.264	ENSPMGG00000017071	-	93	71.264	Periophthalmus_magnuspinnatus
ENSSDUG00000010997	-	95	52.381	ENSPMAG00000010266	-	80	52.381	Petromyzon_marinus
ENSSDUG00000010997	-	61	62.136	ENSPMAG00000003064	-	64	62.136	Petromyzon_marinus
ENSSDUG00000010997	-	63	87.736	ENSPLAG00000012690	-	63	87.736	Poecilia_latipinna
ENSSDUG00000010997	-	100	48.521	ENSPNYG00000006286	-	91	48.521	Pundamilia_nyererei
ENSSDUG00000010997	-	82	89.051	ENSPNYG00000012665	-	83	89.051	Pundamilia_nyererei
ENSSDUG00000010997	-	73	68.033	ENSPNAG00000021290	-	65	68.033	Pygocentrus_nattereri
ENSSDUG00000010997	-	60	46.000	YMR230W	RPS10B	93	46.000	Saccharomyces_cerevisiae
ENSSDUG00000010997	-	60	47.000	YOR293W	RPS10A	93	47.000	Saccharomyces_cerevisiae
ENSSDUG00000010997	-	84	69.504	ENSSFOG00015009603	-	69	69.504	Scleropages_formosus
ENSSDUG00000010997	-	64	74.074	ENSSFOG00015012004	-	61	74.074	Scleropages_formosus
ENSSDUG00000010997	-	88	93.506	ENSSLDG00000012473	-	99	93.506	Seriola_lalandi_dorsalis
ENSSDUG00000010997	-	74	62.400	ENSSLDG00000016257	-	68	62.400	Seriola_lalandi_dorsalis
ENSSDUG00000010997	-	68	83.621	ENSSPAG00000015615	-	91	83.621	Stegastes_partitus
ENSSDUG00000010997	-	57	67.708	ENSSPAG00000012512	-	50	67.708	Stegastes_partitus
ENSSDUG00000010997	-	59	76.768	ENSSSCG00000033521	-	61	76.768	Sus_scrofa
ENSSDUG00000010997	-	74	65.873	ENSXETG00000032983	-	66	68.254	Xenopus_tropicalis
ENSSDUG00000010997	-	81	86.029	ENSXCOG00000016917	-	84	86.029	Xiphophorus_couchianus
ENSSDUG00000010997	-	65	71.074	ENSXMAG00000029046	-	70	71.074	Xiphophorus_maculatus