EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000011036 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1130 bases
Position: chrBDQW01000088.1:5261508-5262637
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015113	RRM_1	PF00076.22	3.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015396	-	279	-	ENSSDUP00000015113	92 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000011036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000011036	-	83	46.250	ENSSDUG00000021338	srsf7b	56	46.250
ENSSDUG00000011036	-	79	44.737	ENSSDUG00000009243	srsf3b	61	44.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011036	-	90	87.059	ENSG00000124193	SRSF6	63	87.059	Homo_sapiens
ENSSDUG00000011036	-	83	93.421	ENSAPOG00000016635	-	58	84.043	Acanthochromis_polyacanthus
ENSSDUG00000011036	-	91	97.619	ENSACIG00000020091	-	82	97.619	Amphilophus_citrinellus
ENSSDUG00000011036	-	83	93.421	ENSAOCG00000019438	-	72	91.463	Amphiprion_ocellaris
ENSSDUG00000011036	-	90	87.059	ENSANAG00000024080	SRSF6	63	87.059	Aotus_nancymaae
ENSSDUG00000011036	-	90	98.795	ENSACLG00000024373	-	87	98.795	Astatotilapia_calliptera
ENSSDUG00000011036	-	79	94.521	ENSAMXG00000042692	-	59	92.683	Astyanax_mexicanus
ENSSDUG00000011036	-	90	88.235	ENSBTAG00000008527	SRSF6	63	88.235	Bos_taurus
ENSSDUG00000011036	-	90	87.059	ENSCJAG00000048403	SRSF6	63	87.059	Callithrix_jacchus
ENSSDUG00000011036	-	90	88.235	ENSCAFG00000009289	SRSF6	63	88.235	Canis_familiaris
ENSSDUG00000011036	-	90	88.235	ENSCAFG00020013559	SRSF6	63	88.235	Canis_lupus_dingo
ENSSDUG00000011036	-	90	88.235	ENSCHIG00000015890	-	63	88.235	Capra_hircus
ENSSDUG00000011036	-	90	87.059	ENSCPOG00000011761	SRSF6	63	87.059	Cavia_porcellus
ENSSDUG00000011036	-	90	87.059	ENSCCAG00000026018	-	63	87.059	Cebus_capucinus
ENSSDUG00000011036	-	90	87.059	ENSCATG00000030794	SRSF6	63	87.059	Cercocebus_atys
ENSSDUG00000011036	-	90	87.059	ENSCLAG00000010247	SRSF6	63	87.059	Chinchilla_lanigera
ENSSDUG00000011036	-	90	87.059	ENSCGRG00001022339	Srsf6	63	87.059	Cricetulus_griseus_chok1gshd
ENSSDUG00000011036	-	83	93.421	ENSCSEG00000019778	SRSF6	69	84.783	Cynoglossus_semilaevis
ENSSDUG00000011036	-	83	90.789	ENSCVAG00000001863	SRSF6	81	89.024	Cyprinodon_variegatus
ENSSDUG00000011036	-	79	93.151	ENSDARG00000016783	srsf6b	86	91.463	Danio_rerio
ENSSDUG00000011036	-	90	87.059	ENSDORG00000028378	Srsf6	63	87.059	Dipodomys_ordii
ENSSDUG00000011036	-	95	92.308	ENSELUG00000024182	SRSF6	94	85.417	Esox_lucius
ENSSDUG00000011036	-	98	86.813	ENSELUG00000013506	SRSF6	83	84.946	Esox_lucius
ENSSDUG00000011036	-	96	81.818	ENSGALG00000000990	SRSF6	65	81.818	Gallus_gallus
ENSSDUG00000011036	-	83	92.105	ENSGAFG00000019088	-	55	82.105	Gambusia_affinis
ENSSDUG00000011036	-	90	87.059	ENSGGOG00000009808	SRSF6	63	87.059	Gorilla_gorilla
ENSSDUG00000011036	-	90	87.059	ENSHGLG00000007348	SRSF6	63	87.059	Heterocephalus_glaber_female
ENSSDUG00000011036	-	90	87.059	ENSSTOG00000010866	SRSF6	63	87.059	Ictidomys_tridecemlineatus
ENSSDUG00000011036	-	90	87.059	ENSMFAG00000036925	SRSF6	63	87.059	Macaca_fascicularis
ENSSDUG00000011036	-	90	87.059	ENSMMUG00000006742	SRSF6	63	87.059	Macaca_mulatta
ENSSDUG00000011036	-	90	85.882	ENSMNEG00000027392	-	63	85.882	Macaca_nemestrina
ENSSDUG00000011036	-	99	97.802	ENSMAMG00000023477	-	98	97.802	Mastacembelus_armatus
ENSSDUG00000011036	-	90	87.059	ENSMAUG00000019086	-	63	87.059	Mesocricetus_auratus
ENSSDUG00000011036	-	90	87.059	ENSMICG00000008537	SRSF6	63	87.059	Microcebus_murinus
ENSSDUG00000011036	-	83	92.105	ENSMMOG00000015241	-	77	90.244	Mola_mola
ENSSDUG00000011036	-	90	87.059	MGP_CAROLIEiJ_G0024606	Srsf6	63	87.059	Mus_caroli
ENSSDUG00000011036	-	90	87.059	ENSMUSG00000016921	Srsf6	63	87.059	Mus_musculus
ENSSDUG00000011036	-	90	87.059	MGP_PahariEiJ_G0026050	Srsf6	63	87.059	Mus_pahari
ENSSDUG00000011036	-	90	87.059	MGP_SPRETEiJ_G0025528	Srsf6	63	87.059	Mus_spretus
ENSSDUG00000011036	-	90	87.059	ENSNGAG00000017560	Srsf6	63	87.059	Nannospalax_galili
ENSSDUG00000011036	-	90	87.059	ENSNLEG00000006524	SRSF6	63	87.059	Nomascus_leucogenys
ENSSDUG00000011036	-	90	87.059	ENSODEG00000016510	-	63	87.059	Octodon_degus
ENSSDUG00000011036	-	83	92.105	ENSORLG00020017506	srsf6a	56	84.444	Oryzias_latipes_hni
ENSSDUG00000011036	-	90	87.059	ENSPTRG00000044686	-	63	87.059	Pan_troglodytes
ENSSDUG00000011036	-	90	87.059	ENSPANG00000035224	SRSF6	63	87.059	Papio_anubis
ENSSDUG00000011036	-	95	71.264	ENSPKIG00000015703	-	70	67.416	Paramormyrops_kingsleyae
ENSSDUG00000011036	-	91	89.286	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSSDUG00000011036	-	83	93.421	ENSPKIG00000015603	-	64	86.667	Paramormyrops_kingsleyae
ENSSDUG00000011036	-	90	87.059	ENSPCIG00000003820	SRSF6	63	87.059	Phascolarctos_cinereus
ENSSDUG00000011036	-	83	92.105	ENSPLAG00000009243	srsf6a	60	82.105	Poecilia_latipinna
ENSSDUG00000011036	-	83	92.105	ENSPREG00000001040	srsf6a	64	82.105	Poecilia_reticulata
ENSSDUG00000011036	-	90	87.059	ENSPCOG00000026364	SRSF6	63	87.059	Propithecus_coquereli
ENSSDUG00000011036	-	90	90.361	ENSPNAG00000023179	-	64	90.361	Pygocentrus_nattereri
ENSSDUG00000011036	-	100	79.787	ENSRBIG00000041414	SRSF6	72	79.787	Rhinopithecus_bieti
ENSSDUG00000011036	-	90	87.059	ENSRROG00000029989	SRSF6	63	87.059	Rhinopithecus_roxellana
ENSSDUG00000011036	-	90	87.059	ENSSBOG00000033708	-	63	87.059	Saimiri_boliviensis_boliviensis
ENSSDUG00000011036	-	83	92.105	ENSSMAG00000014861	-	56	92.105	Scophthalmus_maximus
ENSSDUG00000011036	-	100	100.000	ENSSLDG00000014858	-	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000011036	-	96	81.818	ENSSPUG00000004967	SRSF6	65	81.818	Sphenodon_punctatus
ENSSDUG00000011036	-	97	97.753	ENSSPAG00000021913	-	93	97.753	Stegastes_partitus
ENSSDUG00000011036	-	83	93.421	ENSTRUG00000021397	-	83	93.421	Takifugu_rubripes
ENSSDUG00000011036	-	90	88.235	ENSUAMG00000003559	SRSF6	63	88.235	Ursus_americanus
ENSSDUG00000011036	-	90	56.471	ENSVVUG00000019276	-	61	56.471	Vulpes_vulpes