EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000011052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3878 bases
Position: chrBDQW01000078.1:1828420-1832297
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015136	S10_plectin	PF03501.15	2.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000015420	-	477	-	ENSSDUP00000015136	158 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000011052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000011052	-	70	50.442	ENSSDUG00000018963	rps10	67	50.442
ENSSDUG00000011052	-	95	56.410	ENSSDUG00000010997	-	92	56.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011052	-	78	61.069	ENSAPOG00000014059	-	90	61.069	Acanthochromis_polyacanthus
ENSSDUG00000011052	-	78	63.415	ENSAPOG00000016494	-	62	63.415	Acanthochromis_polyacanthus
ENSSDUG00000011052	-	80	62.406	ENSACIG00000013806	-	82	58.667	Amphilophus_citrinellus
ENSSDUG00000011052	-	77	67.769	ENSACIG00000019704	-	62	67.769	Amphilophus_citrinellus
ENSSDUG00000011052	-	97	55.000	ENSAOCG00000011000	-	93	55.000	Amphiprion_ocellaris
ENSSDUG00000011052	-	65	73.529	ENSAOCG00000007730	-	60	73.529	Amphiprion_ocellaris
ENSSDUG00000011052	-	56	63.636	ENSAPEG00000017745	-	56	63.636	Amphiprion_percula
ENSSDUG00000011052	-	65	69.608	ENSAPEG00000019531	-	58	69.608	Amphiprion_percula
ENSSDUG00000011052	-	65	77.670	ENSATEG00000004340	-	73	77.670	Anabas_testudineus
ENSSDUG00000011052	-	82	65.385	ENSACLG00000001013	-	74	65.385	Astatotilapia_calliptera
ENSSDUG00000011052	-	77	63.780	ENSAMXG00000037914	-	77	63.780	Astyanax_mexicanus
ENSSDUG00000011052	-	63	45.631	WBGene00004479	rps-10	68	45.631	Caenorhabditis_elegans
ENSSDUG00000011052	-	84	44.286	ENSCING00000006180	-	87	43.571	Ciona_intestinalis
ENSSDUG00000011052	-	81	62.687	ENSCSEG00000009179	-	78	62.687	Cynoglossus_semilaevis
ENSSDUG00000011052	-	62	48.980	FBgn0027494	RpS10a	71	41.985	Drosophila_melanogaster
ENSSDUG00000011052	-	81	50.000	FBgn0285947	RpS10b	73	50.000	Drosophila_melanogaster
ENSSDUG00000011052	-	80	49.206	ENSEBUG00000015221	-	77	49.206	Eptatretus_burgeri
ENSSDUG00000011052	-	78	57.258	ENSEASG00005009727	-	55	57.258	Equus_asinus_asinus
ENSSDUG00000011052	-	65	63.107	ENSECAG00000039725	-	50	63.107	Equus_caballus
ENSSDUG00000011052	-	88	57.931	ENSFHEG00000008769	-	89	57.931	Fundulus_heteroclitus
ENSSDUG00000011052	-	77	62.500	ENSGAFG00000001335	-	66	62.500	Gambusia_affinis
ENSSDUG00000011052	-	82	65.385	ENSHBUG00000018067	-	74	65.385	Haplochromis_burtoni
ENSSDUG00000011052	-	87	61.538	ENSHBUG00000023819	-	84	61.538	Haplochromis_burtoni
ENSSDUG00000011052	-	93	53.333	ENSHCOG00000010612	-	63	53.333	Hippocampus_comes
ENSSDUG00000011052	-	83	75.573	ENSLBEG00000020432	-	86	75.573	Labrus_bergylta
ENSSDUG00000011052	-	80	59.701	ENSLACG00000010998	-	77	59.701	Latimeria_chalumnae
ENSSDUG00000011052	-	82	65.385	ENSMZEG00005026198	-	74	65.385	Maylandia_zebra
ENSSDUG00000011052	-	87	60.839	ENSMZEG00005007838	-	84	60.839	Maylandia_zebra
ENSSDUG00000011052	-	61	71.134	ENSMMOG00000003228	-	55	71.134	Mola_mola
ENSSDUG00000011052	-	91	60.784	ENSMMOG00000014380	-	77	60.784	Mola_mola
ENSSDUG00000011052	-	84	60.294	ENSMALG00000003094	-	53	60.294	Monopterus_albus
ENSSDUG00000011052	-	65	77.451	ENSMALG00000015614	-	63	77.451	Monopterus_albus
ENSSDUG00000011052	-	75	65.600	ENSNBRG00000008848	-	87	65.600	Neolamprologus_brichardi
ENSSDUG00000011052	-	82	66.154	ENSNBRG00000016554	-	74	66.154	Neolamprologus_brichardi
ENSSDUG00000011052	-	75	61.111	ENSPKIG00000013061	-	69	61.111	Paramormyrops_kingsleyae
ENSSDUG00000011052	-	75	64.000	ENSPMGG00000017071	-	67	64.000	Periophthalmus_magnuspinnatus
ENSSDUG00000011052	-	71	52.679	ENSPMAG00000003064	-	69	52.679	Petromyzon_marinus
ENSSDUG00000011052	-	100	48.428	ENSPMAG00000010266	-	79	48.428	Petromyzon_marinus
ENSSDUG00000011052	-	65	67.647	ENSPLAG00000012690	-	61	67.647	Poecilia_latipinna
ENSSDUG00000011052	-	87	60.839	ENSPNYG00000012665	-	84	60.839	Pundamilia_nyererei
ENSSDUG00000011052	-	82	66.154	ENSPNYG00000006286	-	74	66.154	Pundamilia_nyererei
ENSSDUG00000011052	-	82	60.769	ENSPNAG00000021290	-	73	60.769	Pygocentrus_nattereri
ENSSDUG00000011052	-	64	43.564	YOR293W	RPS10A	94	43.564	Saccharomyces_cerevisiae
ENSSDUG00000011052	-	64	42.574	YMR230W	RPS10B	94	42.574	Saccharomyces_cerevisiae
ENSSDUG00000011052	-	80	60.150	ENSSFOG00015009603	-	66	60.150	Scleropages_formosus
ENSSDUG00000011052	-	68	67.890	ENSSFOG00015012004	-	62	67.890	Scleropages_formosus
ENSSDUG00000011052	-	75	64.000	ENSSLDG00000012473	-	80	64.000	Seriola_lalandi_dorsalis
ENSSDUG00000011052	-	87	84.768	ENSSLDG00000016257	-	86	84.768	Seriola_lalandi_dorsalis
ENSSDUG00000011052	-	81	61.719	ENSSPAG00000012512	-	63	61.719	Stegastes_partitus
ENSSDUG00000011052	-	65	68.627	ENSSPAG00000015615	-	80	68.627	Stegastes_partitus
ENSSDUG00000011052	-	63	67.677	ENSSSCG00000033521	-	61	67.677	Sus_scrofa
ENSSDUG00000011052	-	75	57.143	ENSXETG00000032983	-	66	60.317	Xenopus_tropicalis
ENSSDUG00000011052	-	88	57.931	ENSXCOG00000016917	-	89	57.931	Xiphophorus_couchianus
ENSSDUG00000011052	-	59	69.892	ENSXMAG00000029046	-	54	69.892	Xiphophorus_maculatus