EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000011478 (Gene tree)
Gene ID: 111228360
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 14739 bases
Position: chrBDQW01000219.1:1890805-1905543
Accession: 111228360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015721	MMR_HSR1	PF01926.23	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016009	-	6434	XM_022754181	ENSSDUP00000015721	664 (aa)	XP_022609902	UPI000BBE792D

Gene Model

Click here to download ENSSDUG00000011478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000011478	zgc:162879	65	63.291	ENSSDUG00000022228	rasef	91	36.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011478	zgc:162879	99	85.736	ENSAPOG00000008539	zgc:162879	99	85.736	Acanthochromis_polyacanthus
ENSSDUG00000011478	zgc:162879	100	86.617	ENSACIG00000023717	zgc:162879	100	86.617	Amphilophus_citrinellus
ENSSDUG00000011478	zgc:162879	84	83.750	ENSAOCG00000006210	zgc:162879	87	83.750	Amphiprion_ocellaris
ENSSDUG00000011478	zgc:162879	99	86.646	ENSAPEG00000017489	zgc:162879	99	86.646	Amphiprion_percula
ENSSDUG00000011478	zgc:162879	100	90.964	ENSATEG00000006102	zgc:162879	100	90.964	Anabas_testudineus
ENSSDUG00000011478	zgc:162879	100	84.337	ENSACLG00000021066	zgc:162879	100	82.707	Astatotilapia_calliptera
ENSSDUG00000011478	zgc:162879	99	64.776	ENSAMXG00000007430	zgc:162879	99	64.776	Astyanax_mexicanus
ENSSDUG00000011478	zgc:162879	84	66.132	ENSCSEG00000013699	zgc:162879	91	66.132	Cynoglossus_semilaevis
ENSSDUG00000011478	zgc:162879	99	76.435	ENSCVAG00000014510	zgc:162879	99	76.435	Cyprinodon_variegatus
ENSSDUG00000011478	zgc:162879	99	63.855	ENSDARG00000074163	zgc:162879	99	63.855	Danio_rerio
ENSSDUG00000011478	zgc:162879	91	67.377	ENSELUG00000019483	zgc:162879	98	67.377	Esox_lucius
ENSSDUG00000011478	zgc:162879	76	74.008	ENSFHEG00000022549	zgc:162879	99	73.810	Fundulus_heteroclitus
ENSSDUG00000011478	zgc:162879	100	75.452	ENSGAFG00000001313	zgc:162879	100	75.452	Gambusia_affinis
ENSSDUG00000011478	zgc:162879	100	79.221	ENSGACG00000010798	zgc:162879	99	79.221	Gasterosteus_aculeatus
ENSSDUG00000011478	zgc:162879	100	84.361	ENSHBUG00000016335	zgc:162879	100	84.361	Haplochromis_burtoni
ENSSDUG00000011478	zgc:162879	91	59.672	ENSHCOG00000012026	zgc:162879	99	60.000	Hippocampus_comes
ENSSDUG00000011478	zgc:162879	100	69.624	ENSKMAG00000016246	zgc:162879	100	70.075	Kryptolebias_marmoratus
ENSSDUG00000011478	zgc:162879	99	82.078	ENSLBEG00000006690	zgc:162879	100	82.078	Labrus_bergylta
ENSSDUG00000011478	zgc:162879	99	43.816	ENSLACG00000014082	-	99	43.816	Latimeria_chalumnae
ENSSDUG00000011478	zgc:162879	99	61.961	ENSLOCG00000014347	zgc:162879	98	61.961	Lepisosteus_oculatus
ENSSDUG00000011478	zgc:162879	100	83.735	ENSMAMG00000008875	zgc:162879	100	83.735	Mastacembelus_armatus
ENSSDUG00000011478	zgc:162879	100	84.187	ENSMZEG00005022256	zgc:162879	100	84.187	Maylandia_zebra
ENSSDUG00000011478	zgc:162879	100	75.639	ENSNBRG00000020110	zgc:162879	100	75.639	Neolamprologus_brichardi
ENSSDUG00000011478	zgc:162879	99	80.857	ENSONIG00000015165	zgc:162879	100	80.857	Oreochromis_niloticus
ENSSDUG00000011478	zgc:162879	99	70.633	ENSORLG00015017960	zgc:162879	99	70.633	Oryzias_latipes_hsok
ENSSDUG00000011478	zgc:162879	99	57.402	ENSPKIG00000020661	zgc:162879	99	59.819	Paramormyrops_kingsleyae
ENSSDUG00000011478	zgc:162879	100	74.398	ENSPFOG00000006354	zgc:162879	99	74.398	Poecilia_formosa
ENSSDUG00000011478	zgc:162879	100	74.548	ENSPLAG00000020643	zgc:162879	99	74.548	Poecilia_latipinna
ENSSDUG00000011478	zgc:162879	100	74.096	ENSPMEG00000014713	zgc:162879	100	74.096	Poecilia_mexicana
ENSSDUG00000011478	zgc:162879	100	76.842	ENSPNYG00000010530	zgc:162879	100	76.842	Pundamilia_nyererei
ENSSDUG00000011478	zgc:162879	99	63.934	ENSPNAG00000012022	zgc:162879	99	63.934	Pygocentrus_nattereri
ENSSDUG00000011478	zgc:162879	85	51.384	ENSSFOG00015023774	zgc:162879	91	51.384	Scleropages_formosus
ENSSDUG00000011478	zgc:162879	100	85.542	ENSSMAG00000001513	zgc:162879	99	86.032	Scophthalmus_maximus
ENSSDUG00000011478	zgc:162879	100	99.398	ENSSLDG00000000877	zgc:162879	100	99.398	Seriola_lalandi_dorsalis
ENSSDUG00000011478	zgc:162879	99	78.452	ENSSPAG00000010598	zgc:162879	99	78.452	Stegastes_partitus
ENSSDUG00000011478	zgc:162879	99	73.722	ENSTNIG00000019239	zgc:162879	99	73.722	Tetraodon_nigroviridis
ENSSDUG00000011478	zgc:162879	99	43.333	ENSXETG00000015491	rasef	98	43.333	Xenopus_tropicalis
ENSSDUG00000011478	zgc:162879	77	69.548	ENSXCOG00000020244	zgc:162879	100	69.548	Xiphophorus_couchianus
ENSSDUG00000011478	zgc:162879	100	76.054	ENSXMAG00000002846	zgc:162879	100	76.054	Xiphophorus_maculatus