EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000011590 (Gene tree)
Gene ID: 111230542
Gene Symbol: sf3a3
Alias: wu:fi15a06|wu:fj94f01|zgc:110227
Full Name: splicing factor 3a subunit 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6865 bases
Position: chrBDQW01000273.1:1866581-1873445
Accession: 111230542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015907	SF3a60_bindingd	PF12108.8	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016195	-	1464	XM_022757305	ENSSDUP00000015907	487 (aa)	XP_022613026	-

Gene Model

Click here to download ENSSDUG00000011590's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011590	sf3a3	100	88.024	ENSG00000183431	SF3A3	100	88.024	Homo_sapiens
ENSSDUG00000011590	sf3a3	100	93.812	ENSAPOG00000015608	sf3a3	100	93.812	Acanthochromis_polyacanthus
ENSSDUG00000011590	sf3a3	100	88.024	ENSAMEG00000001262	SF3A3	100	88.024	Ailuropoda_melanoleuca
ENSSDUG00000011590	sf3a3	95	87.771	ENSACIG00000009061	sf3a3	99	87.771	Amphilophus_citrinellus
ENSSDUG00000011590	sf3a3	100	94.212	ENSAOCG00000013954	sf3a3	100	94.212	Amphiprion_ocellaris
ENSSDUG00000011590	sf3a3	100	94.212	ENSAPEG00000007297	sf3a3	100	94.212	Amphiprion_percula
ENSSDUG00000011590	sf3a3	100	94.012	ENSATEG00000008754	sf3a3	100	94.012	Anabas_testudineus
ENSSDUG00000011590	sf3a3	93	87.846	ENSAPLG00000014900	SF3A3	100	87.846	Anas_platyrhynchos
ENSSDUG00000011590	sf3a3	100	86.228	ENSACAG00000017058	SF3A3	100	86.228	Anolis_carolinensis
ENSSDUG00000011590	sf3a3	100	69.153	ENSANAG00000036903	-	100	69.153	Aotus_nancymaae
ENSSDUG00000011590	sf3a3	99	85.081	ENSANAG00000014878	SF3A3	100	85.081	Aotus_nancymaae
ENSSDUG00000011590	sf3a3	100	94.012	ENSACLG00000017977	sf3a3	100	94.012	Astatotilapia_calliptera
ENSSDUG00000011590	sf3a3	100	91.218	ENSAMXG00000016855	sf3a3	87	91.218	Astyanax_mexicanus
ENSSDUG00000011590	sf3a3	100	88.024	ENSBTAG00000007299	SF3A3	100	88.024	Bos_taurus
ENSSDUG00000011590	sf3a3	100	49.702	WBGene00011758	T13H5.4	100	49.702	Caenorhabditis_elegans
ENSSDUG00000011590	sf3a3	100	88.024	ENSCJAG00000002176	SF3A3	100	88.024	Callithrix_jacchus
ENSSDUG00000011590	sf3a3	100	88.024	ENSCAFG00000003222	-	100	88.024	Canis_familiaris
ENSSDUG00000011590	sf3a3	100	88.024	ENSCAFG00000000683	-	100	88.024	Canis_familiaris
ENSSDUG00000011590	sf3a3	100	88.024	ENSCAFG00020006186	SF3A3	100	88.024	Canis_lupus_dingo
ENSSDUG00000011590	sf3a3	100	88.024	ENSCHIG00000020638	SF3A3	100	88.024	Capra_hircus
ENSSDUG00000011590	sf3a3	100	81.836	ENSTSYG00000008417	SF3A3	100	81.836	Carlito_syrichta
ENSSDUG00000011590	sf3a3	84	59.809	ENSCAPG00000003466	SF3A3	96	56.938	Cavia_aperea
ENSSDUG00000011590	sf3a3	100	88.224	ENSCPOG00000008660	SF3A3	100	88.224	Cavia_porcellus
ENSSDUG00000011590	sf3a3	100	88.024	ENSCCAG00000033732	SF3A3	100	88.024	Cebus_capucinus
ENSSDUG00000011590	sf3a3	100	62.475	ENSCCAG00000034048	-	100	59.481	Cebus_capucinus
ENSSDUG00000011590	sf3a3	100	65.795	ENSCATG00000043537	-	100	66.398	Cercocebus_atys
ENSSDUG00000011590	sf3a3	100	88.024	ENSCATG00000043496	SF3A3	100	88.024	Cercocebus_atys
ENSSDUG00000011590	sf3a3	93	70.789	ENSCATG00000041660	-	100	72.281	Cercocebus_atys
ENSSDUG00000011590	sf3a3	100	88.024	ENSCLAG00000010838	SF3A3	100	88.024	Chinchilla_lanigera
ENSSDUG00000011590	sf3a3	95	87.395	ENSCSAG00000001120	SF3A3	100	87.395	Chlorocebus_sabaeus
ENSSDUG00000011590	sf3a3	80	86.772	ENSCHOG00000006849	SF3A3	80	86.772	Choloepus_hoffmanni
ENSSDUG00000011590	sf3a3	69	59.943	ENSCPBG00000007472	-	95	59.773	Chrysemys_picta_bellii
ENSSDUG00000011590	sf3a3	100	81.048	ENSCPBG00000018291	-	100	81.048	Chrysemys_picta_bellii
ENSSDUG00000011590	sf3a3	100	64.940	ENSCING00000002730	-	100	64.940	Ciona_intestinalis
ENSSDUG00000011590	sf3a3	100	64.870	ENSCSAVG00000005063	-	100	64.870	Ciona_savignyi
ENSSDUG00000011590	sf3a3	100	88.024	ENSCANG00000042083	SF3A3	100	88.024	Colobus_angolensis_palliatus
ENSSDUG00000011590	sf3a3	100	62.400	ENSCANG00000035535	-	100	62.400	Colobus_angolensis_palliatus
ENSSDUG00000011590	sf3a3	100	88.224	ENSCGRG00001011320	Sf3a3	100	88.224	Cricetulus_griseus_chok1gshd
ENSSDUG00000011590	sf3a3	100	88.224	ENSCGRG00000012156	Sf3a3	100	88.224	Cricetulus_griseus_crigri
ENSSDUG00000011590	sf3a3	100	92.216	ENSCSEG00000010401	sf3a3	100	92.216	Cynoglossus_semilaevis
ENSSDUG00000011590	sf3a3	93	91.045	ENSCVAG00000010239	sf3a3	95	91.045	Cyprinodon_variegatus
ENSSDUG00000011590	sf3a3	100	89.820	ENSDARG00000100114	sf3a3	100	93.079	Danio_rerio
ENSSDUG00000011590	sf3a3	91	87.090	ENSDNOG00000046628	SF3A3	99	87.090	Dasypus_novemcinctus
ENSSDUG00000011590	sf3a3	100	88.224	ENSDORG00000008798	Sf3a3	100	88.224	Dipodomys_ordii
ENSSDUG00000011590	sf3a3	100	62.451	FBgn0014366	noi	100	62.253	Drosophila_melanogaster
ENSSDUG00000011590	sf3a3	100	76.143	ENSEBUG00000015411	sf3a3	92	76.541	Eptatretus_burgeri
ENSSDUG00000011590	sf3a3	100	88.024	ENSEASG00005012906	SF3A3	100	88.024	Equus_asinus_asinus
ENSSDUG00000011590	sf3a3	100	88.024	ENSECAG00000017333	SF3A3	100	88.024	Equus_caballus
ENSSDUG00000011590	sf3a3	100	89.421	ENSELUG00000010024	sf3a3	100	89.421	Esox_lucius
ENSSDUG00000011590	sf3a3	100	88.024	ENSFCAG00000027772	SF3A3	100	88.024	Felis_catus
ENSSDUG00000011590	sf3a3	100	87.824	ENSFALG00000001003	SF3A3	100	87.824	Ficedula_albicollis
ENSSDUG00000011590	sf3a3	100	89.135	ENSFDAG00000020908	SF3A3	100	89.135	Fukomys_damarensis
ENSSDUG00000011590	sf3a3	100	92.415	ENSFHEG00000019107	sf3a3	100	92.415	Fundulus_heteroclitus
ENSSDUG00000011590	sf3a3	100	89.421	ENSGMOG00000015540	sf3a3	100	89.421	Gadus_morhua
ENSSDUG00000011590	sf3a3	100	87.625	ENSGALG00000001540	SF3A3	100	87.625	Gallus_gallus
ENSSDUG00000011590	sf3a3	100	93.214	ENSGAFG00000002320	sf3a3	100	93.214	Gambusia_affinis
ENSSDUG00000011590	sf3a3	100	93.014	ENSGACG00000007842	sf3a3	100	93.014	Gasterosteus_aculeatus
ENSSDUG00000011590	sf3a3	100	87.625	ENSGAGG00000014980	SF3A3	100	87.625	Gopherus_agassizii
ENSSDUG00000011590	sf3a3	100	88.024	ENSGGOG00000013928	SF3A3	100	88.024	Gorilla_gorilla
ENSSDUG00000011590	sf3a3	100	68.064	ENSGGOG00000022611	-	100	67.665	Gorilla_gorilla
ENSSDUG00000011590	sf3a3	100	94.012	ENSHBUG00000018158	sf3a3	100	94.012	Haplochromis_burtoni
ENSSDUG00000011590	sf3a3	100	88.224	ENSHGLG00000012502	SF3A3	100	88.224	Heterocephalus_glaber_female
ENSSDUG00000011590	sf3a3	100	88.224	ENSHGLG00100010546	SF3A3	100	88.224	Heterocephalus_glaber_male
ENSSDUG00000011590	sf3a3	100	91.417	ENSHCOG00000015109	sf3a3	100	91.417	Hippocampus_comes
ENSSDUG00000011590	sf3a3	100	89.820	ENSIPUG00000011603	sf3a3	100	89.820	Ictalurus_punctatus
ENSSDUG00000011590	sf3a3	100	88.024	ENSSTOG00000001691	SF3A3	100	88.024	Ictidomys_tridecemlineatus
ENSSDUG00000011590	sf3a3	100	88.423	ENSJJAG00000012404	Sf3a3	100	88.423	Jaculus_jaculus
ENSSDUG00000011590	sf3a3	100	92.814	ENSKMAG00000007632	sf3a3	100	92.814	Kryptolebias_marmoratus
ENSSDUG00000011590	sf3a3	100	84.462	ENSLBEG00000000816	sf3a3	100	84.462	Labrus_bergylta
ENSSDUG00000011590	sf3a3	100	90.818	ENSLOCG00000003273	sf3a3	100	90.818	Lepisosteus_oculatus
ENSSDUG00000011590	sf3a3	100	76.954	ENSLAFG00000008094	SF3A3	100	76.954	Loxodonta_africana
ENSSDUG00000011590	sf3a3	93	69.936	ENSMFAG00000036706	-	100	71.642	Macaca_fascicularis
ENSSDUG00000011590	sf3a3	100	88.024	ENSMFAG00000043047	SF3A3	100	88.024	Macaca_fascicularis
ENSSDUG00000011590	sf3a3	100	88.024	ENSMMUG00000023199	SF3A3	100	88.024	Macaca_mulatta
ENSSDUG00000011590	sf3a3	100	68.127	ENSMMUG00000038820	-	100	69.721	Macaca_mulatta
ENSSDUG00000011590	sf3a3	93	68.017	ENSMNEG00000028686	-	100	69.723	Macaca_nemestrina
ENSSDUG00000011590	sf3a3	100	88.024	ENSMNEG00000044291	SF3A3	100	88.024	Macaca_nemestrina
ENSSDUG00000011590	sf3a3	100	65.191	ENSMLEG00000028631	-	100	65.795	Mandrillus_leucophaeus
ENSSDUG00000011590	sf3a3	100	73.054	ENSMLEG00000036714	-	100	74.451	Mandrillus_leucophaeus
ENSSDUG00000011590	sf3a3	100	88.024	ENSMLEG00000030641	SF3A3	100	88.024	Mandrillus_leucophaeus
ENSSDUG00000011590	sf3a3	100	93.812	ENSMAMG00000001942	sf3a3	100	93.812	Mastacembelus_armatus
ENSSDUG00000011590	sf3a3	100	94.012	ENSMZEG00005016987	sf3a3	100	94.012	Maylandia_zebra
ENSSDUG00000011590	sf3a3	100	85.600	ENSMGAG00000002875	SF3A3	100	85.600	Meleagris_gallopavo
ENSSDUG00000011590	sf3a3	91	84.716	ENSMICG00000026541	-	100	84.716	Microcebus_murinus
ENSSDUG00000011590	sf3a3	100	82.435	ENSMICG00000043548	-	100	82.435	Microcebus_murinus
ENSSDUG00000011590	sf3a3	100	83.633	ENSMICG00000001485	-	100	83.633	Microcebus_murinus
ENSSDUG00000011590	sf3a3	100	85.030	ENSMOCG00000019939	-	100	85.030	Microtus_ochrogaster
ENSSDUG00000011590	sf3a3	95	83.015	ENSMOCG00000014565	-	97	82.590	Microtus_ochrogaster
ENSSDUG00000011590	sf3a3	100	93.812	ENSMMOG00000014307	sf3a3	100	93.812	Mola_mola
ENSSDUG00000011590	sf3a3	100	68.350	ENSMODG00000017729	-	100	67.375	Monodelphis_domestica
ENSSDUG00000011590	sf3a3	100	80.357	ENSMODG00000024045	-	100	80.357	Monodelphis_domestica
ENSSDUG00000011590	sf3a3	100	94.012	ENSMALG00000004836	sf3a3	100	94.012	Monopterus_albus
ENSSDUG00000011590	sf3a3	100	88.224	MGP_CAROLIEiJ_G0026449	Sf3a3	100	88.224	Mus_caroli
ENSSDUG00000011590	sf3a3	100	88.224	ENSMUSG00000028902	Sf3a3	100	88.224	Mus_musculus
ENSSDUG00000011590	sf3a3	100	82.834	MGP_PahariEiJ_G0028780	Sf3a3	100	82.834	Mus_pahari
ENSSDUG00000011590	sf3a3	100	88.224	MGP_SPRETEiJ_G0027428	Sf3a3	100	88.224	Mus_spretus
ENSSDUG00000011590	sf3a3	100	88.024	ENSMLUG00000000991	SF3A3	100	88.024	Myotis_lucifugus
ENSSDUG00000011590	sf3a3	100	82.635	ENSNGAG00000018032	Sf3a3	100	82.635	Nannospalax_galili
ENSSDUG00000011590	sf3a3	100	80.040	ENSNLEG00000011720	SF3A3	100	80.040	Nomascus_leucogenys
ENSSDUG00000011590	sf3a3	100	88.224	ENSOPRG00000012785	SF3A3	100	88.224	Ochotona_princeps
ENSSDUG00000011590	sf3a3	100	84.032	ENSODEG00000007470	-	100	84.032	Octodon_degus
ENSSDUG00000011590	sf3a3	100	83.234	ENSODEG00000006854	-	100	85.828	Octodon_degus
ENSSDUG00000011590	sf3a3	100	76.647	ENSODEG00000018393	-	100	76.447	Octodon_degus
ENSSDUG00000011590	sf3a3	100	76.065	ENSODEG00000000937	-	100	78.499	Octodon_degus
ENSSDUG00000011590	sf3a3	88	97.241	ENSONIG00000010296	sf3a3	100	97.241	Oreochromis_niloticus
ENSSDUG00000011590	sf3a3	93	87.207	ENSOANG00000002473	SF3A3	100	87.207	Ornithorhynchus_anatinus
ENSSDUG00000011590	sf3a3	100	88.224	ENSOCUG00000005407	SF3A3	100	88.224	Oryctolagus_cuniculus
ENSSDUG00000011590	sf3a3	100	91.816	ENSORLG00000008175	sf3a3	100	91.816	Oryzias_latipes
ENSSDUG00000011590	sf3a3	100	91.617	ENSORLG00020013708	sf3a3	100	91.617	Oryzias_latipes_hni
ENSSDUG00000011590	sf3a3	100	91.417	ENSORLG00015004104	sf3a3	100	91.417	Oryzias_latipes_hsok
ENSSDUG00000011590	sf3a3	100	92.415	ENSOMEG00000020177	sf3a3	100	92.415	Oryzias_melastigma
ENSSDUG00000011590	sf3a3	100	88.024	ENSOARG00000019950	SF3A3	100	88.024	Ovis_aries
ENSSDUG00000011590	sf3a3	100	67.465	ENSPPAG00000039955	-	100	67.066	Pan_paniscus
ENSSDUG00000011590	sf3a3	100	88.024	ENSPPAG00000034066	SF3A3	100	88.024	Pan_paniscus
ENSSDUG00000011590	sf3a3	100	88.024	ENSPPRG00000001258	SF3A3	100	88.024	Panthera_pardus
ENSSDUG00000011590	sf3a3	100	88.024	ENSPTIG00000007515	SF3A3	100	88.024	Panthera_tigris_altaica
ENSSDUG00000011590	sf3a3	100	68.463	ENSPTRG00000046013	-	100	68.064	Pan_troglodytes
ENSSDUG00000011590	sf3a3	100	88.024	ENSPTRG00000000559	SF3A3	100	88.024	Pan_troglodytes
ENSSDUG00000011590	sf3a3	87	82.955	ENSPANG00000031214	-	100	64.315	Papio_anubis
ENSSDUG00000011590	sf3a3	100	75.250	ENSPANG00000029393	-	100	76.647	Papio_anubis
ENSSDUG00000011590	sf3a3	100	88.024	ENSPANG00000021859	SF3A3	100	88.024	Papio_anubis
ENSSDUG00000011590	sf3a3	100	90.020	ENSPKIG00000004719	sf3a3	100	90.020	Paramormyrops_kingsleyae
ENSSDUG00000011590	sf3a3	100	85.686	ENSPSIG00000004273	SF3A3	100	85.686	Pelodiscus_sinensis
ENSSDUG00000011590	sf3a3	91	91.247	ENSPMGG00000003610	sf3a3	94	91.247	Periophthalmus_magnuspinnatus
ENSSDUG00000011590	sf3a3	100	88.224	ENSPEMG00000020805	Sf3a3	100	88.224	Peromyscus_maniculatus_bairdii
ENSSDUG00000011590	sf3a3	54	72.222	ENSPMAG00000001044	sf3a3	98	72.222	Petromyzon_marinus
ENSSDUG00000011590	sf3a3	100	87.824	ENSPCIG00000025719	SF3A3	100	87.824	Phascolarctos_cinereus
ENSSDUG00000011590	sf3a3	100	93.214	ENSPFOG00000005284	sf3a3	100	93.214	Poecilia_formosa
ENSSDUG00000011590	sf3a3	99	89.940	ENSPLAG00000003979	sf3a3	92	89.940	Poecilia_latipinna
ENSSDUG00000011590	sf3a3	78	89.637	ENSPMEG00000021132	sf3a3	88	89.610	Poecilia_mexicana
ENSSDUG00000011590	sf3a3	100	93.014	ENSPREG00000013802	sf3a3	100	93.014	Poecilia_reticulata
ENSSDUG00000011590	sf3a3	100	85.429	ENSPPYG00000001519	SF3A3	100	85.429	Pongo_abelii
ENSSDUG00000011590	sf3a3	100	81.637	ENSPCAG00000010734	SF3A3	100	81.637	Procavia_capensis
ENSSDUG00000011590	sf3a3	100	73.790	ENSPCOG00000017131	-	100	73.790	Propithecus_coquereli
ENSSDUG00000011590	sf3a3	100	78.330	ENSPCOG00000020389	-	100	78.330	Propithecus_coquereli
ENSSDUG00000011590	sf3a3	89	96.825	ENSPVAG00000010158	SF3A3	88	96.825	Pteropus_vampyrus
ENSSDUG00000011590	sf3a3	100	94.012	ENSPNYG00000000786	sf3a3	100	94.012	Pundamilia_nyererei
ENSSDUG00000011590	sf3a3	100	91.218	ENSPNAG00000010298	sf3a3	100	91.218	Pygocentrus_nattereri
ENSSDUG00000011590	sf3a3	100	88.224	ENSRNOG00000007629	Sf3a3	100	88.224	Rattus_norvegicus
ENSSDUG00000011590	sf3a3	100	65.795	ENSRBIG00000041123	-	100	65.795	Rhinopithecus_bieti
ENSSDUG00000011590	sf3a3	100	88.024	ENSRBIG00000043567	SF3A3	100	88.024	Rhinopithecus_bieti
ENSSDUG00000011590	sf3a3	100	69.199	ENSRBIG00000043833	-	100	69.199	Rhinopithecus_bieti
ENSSDUG00000011590	sf3a3	100	88.024	ENSRROG00000033888	SF3A3	100	88.024	Rhinopithecus_roxellana
ENSSDUG00000011590	sf3a3	93	70.690	ENSRROG00000032346	-	100	70.690	Rhinopithecus_roxellana
ENSSDUG00000011590	sf3a3	100	63.473	ENSSBOG00000026932	-	100	62.475	Saimiri_boliviensis_boliviensis
ENSSDUG00000011590	sf3a3	83	93.060	ENSSBOG00000032688	SF3A3	100	92.767	Saimiri_boliviensis_boliviensis
ENSSDUG00000011590	sf3a3	89	90.847	ENSSHAG00000014530	SF3A3	96	90.847	Sarcophilus_harrisii
ENSSDUG00000011590	sf3a3	100	92.016	ENSSFOG00015005975	sf3a3	100	92.016	Scleropages_formosus
ENSSDUG00000011590	sf3a3	100	93.413	ENSSMAG00000020213	sf3a3	100	93.413	Scophthalmus_maximus
ENSSDUG00000011590	sf3a3	100	96.761	ENSSLDG00000020635	sf3a3	100	96.761	Seriola_lalandi_dorsalis
ENSSDUG00000011590	sf3a3	100	87.226	ENSSPUG00000004010	SF3A3	100	87.226	Sphenodon_punctatus
ENSSDUG00000011590	sf3a3	100	95.325	ENSSPAG00000018653	sf3a3	100	95.325	Stegastes_partitus
ENSSDUG00000011590	sf3a3	100	88.024	ENSSSCG00000003643	SF3A3	100	88.024	Sus_scrofa
ENSSDUG00000011590	sf3a3	88	91.034	ENSTGUG00000001466	SF3A3	99	91.034	Taeniopygia_guttata
ENSSDUG00000011590	sf3a3	100	92.216	ENSTRUG00000009089	sf3a3	100	92.216	Takifugu_rubripes
ENSSDUG00000011590	sf3a3	100	91.650	ENSTNIG00000009800	sf3a3	100	91.650	Tetraodon_nigroviridis
ENSSDUG00000011590	sf3a3	100	76.647	ENSTBEG00000007614	SF3A3	100	76.647	Tupaia_belangeri
ENSSDUG00000011590	sf3a3	100	87.824	ENSTTRG00000013519	SF3A3	100	87.824	Tursiops_truncatus
ENSSDUG00000011590	sf3a3	100	88.024	ENSUAMG00000006134	SF3A3	100	88.024	Ursus_americanus
ENSSDUG00000011590	sf3a3	100	88.024	ENSUMAG00000021250	SF3A3	100	88.024	Ursus_maritimus
ENSSDUG00000011590	sf3a3	63	97.674	ENSVPAG00000004778	SF3A3	69	97.674	Vicugna_pacos
ENSSDUG00000011590	sf3a3	100	84.232	ENSVVUG00000022908	SF3A3	100	84.232	Vulpes_vulpes
ENSSDUG00000011590	sf3a3	100	85.429	ENSXETG00000022923	sf3a3	100	85.429	Xenopus_tropicalis
ENSSDUG00000011590	sf3a3	100	93.214	ENSXMAG00000017165	sf3a3	100	93.214	Xiphophorus_maculatus