EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000011604 (Gene tree)
Gene ID: 111238486
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3091 bases
Position: chrBDQW01001387.1:293537-296627
Accession: 111238486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000015900	zf-C2H2	PF00096.26	9.9e-27	1	5
ENSSDUP00000015900	zf-C2H2	PF00096.26	9.9e-27	2	5
ENSSDUP00000015900	zf-C2H2	PF00096.26	9.9e-27	3	5
ENSSDUP00000015900	zf-C2H2	PF00096.26	9.9e-27	4	5
ENSSDUP00000015900	zf-C2H2	PF00096.26	9.9e-27	5	5
ENSSDUP00000015900	zf-met	PF12874.7	2e-08	1	2
ENSSDUP00000015900	zf-met	PF12874.7	2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016187	-	984	XM_022768024	ENSSDUP00000015900	327 (aa)	XP_022623745	UPI000BBF2736

Gene Model

Click here to download ENSSDUG00000011604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000011604	gfi1b	100	37.037	ENSSDUG00000007752	scrt1b	95	37.037
ENSSDUG00000011604	gfi1b	56	40.000	ENSSDUG00000016450	-	51	40.000
ENSSDUG00000011604	gfi1b	57	47.445	ENSSDUG00000015204	-	94	47.445
ENSSDUG00000011604	gfi1b	58	41.096	ENSSDUG00000009421	-	82	41.096
ENSSDUG00000011604	gfi1b	64	42.353	ENSSDUG00000000799	-	70	42.353
ENSSDUG00000011604	gfi1b	100	50.521	ENSSDUG00000022410	gfi1ab	100	50.781
ENSSDUG00000011604	gfi1b	51	52.604	ENSSDUG00000022412	znf648	59	58.929
ENSSDUG00000011604	gfi1b	57	38.824	ENSSDUG00000002195	-	91	43.023
ENSSDUG00000011604	gfi1b	51	42.857	ENSSDUG00000005323	-	91	42.857
ENSSDUG00000011604	gfi1b	54	43.609	ENSSDUG00000003003	znf319b	84	43.609
ENSSDUG00000011604	gfi1b	52	44.379	ENSSDUG00000015182	-	65	44.379
ENSSDUG00000011604	gfi1b	61	41.007	ENSSDUG00000009425	-	54	41.007
ENSSDUG00000011604	gfi1b	51	45.455	ENSSDUG00000004650	-	96	45.455
ENSSDUG00000011604	gfi1b	70	35.088	ENSSDUG00000009223	zbtb41	53	34.454
ENSSDUG00000011604	gfi1b	81	44.681	ENSSDUG00000005401	-	95	44.681
ENSSDUG00000011604	gfi1b	54	43.860	ENSSDUG00000015159	-	81	43.860
ENSSDUG00000011604	gfi1b	54	40.127	ENSSDUG00000012745	zbtb16b	58	40.127
ENSSDUG00000011604	gfi1b	55	41.279	ENSSDUG00000006808	-	70	41.279
ENSSDUG00000011604	gfi1b	57	45.695	ENSSDUG00000009577	-	70	45.695
ENSSDUG00000011604	gfi1b	51	46.226	ENSSDUG00000019911	-	52	38.583
ENSSDUG00000011604	gfi1b	57	40.708	ENSSDUG00000002675	znf646	55	40.708
ENSSDUG00000011604	gfi1b	55	39.855	ENSSDUG00000014574	znf526	53	39.855
ENSSDUG00000011604	gfi1b	65	44.079	ENSSDUG00000009563	-	76	44.079
ENSSDUG00000011604	gfi1b	57	49.495	ENSSDUG00000004867	-	99	46.988
ENSSDUG00000011604	gfi1b	93	43.827	ENSSDUG00000020810	-	88	43.827
ENSSDUG00000011604	gfi1b	52	41.912	ENSSDUG00000000705	-	66	41.912
ENSSDUG00000011604	gfi1b	65	46.053	ENSSDUG00000009601	-	96	46.053
ENSSDUG00000011604	gfi1b	93	41.606	ENSSDUG00000000786	-	92	50.602
ENSSDUG00000011604	gfi1b	51	33.600	ENSSDUG00000017250	-	53	33.600
ENSSDUG00000011604	gfi1b	56	43.125	ENSSDUG00000006463	-	84	43.125
ENSSDUG00000011604	gfi1b	51	40.506	ENSSDUG00000004892	-	87	34.211
ENSSDUG00000011604	gfi1b	52	43.226	ENSSDUG00000001263	-	79	43.226
ENSSDUG00000011604	gfi1b	52	42.105	ENSSDUG00000012926	-	64	42.105
ENSSDUG00000011604	gfi1b	56	47.183	ENSSDUG00000008943	-	85	45.968
ENSSDUG00000011604	gfi1b	57	43.284	ENSSDUG00000000695	-	75	43.284
ENSSDUG00000011604	gfi1b	63	43.382	ENSSDUG00000009553	-	60	43.382
ENSSDUG00000011604	gfi1b	53	40.361	ENSSDUG00000022035	-	55	40.361
ENSSDUG00000011604	gfi1b	54	43.609	ENSSDUG00000019932	ZNF319	93	43.609
ENSSDUG00000011604	gfi1b	51	36.283	ENSSDUG00000019933	snai1a	56	36.145
ENSSDUG00000011604	gfi1b	54	41.615	ENSSDUG00000020397	prdm5	73	41.615
ENSSDUG00000011604	gfi1b	55	40.769	ENSSDUG00000015622	-	74	40.336
ENSSDUG00000011604	gfi1b	53	41.463	ENSSDUG00000023764	-	95	43.357
ENSSDUG00000011604	gfi1b	53	44.828	ENSSDUG00000023765	-	67	44.828
ENSSDUG00000011604	gfi1b	58	42.143	ENSSDUG00000002488	-	61	42.143
ENSSDUG00000011604	gfi1b	52	32.484	ENSSDUG00000000889	-	75	32.484
ENSSDUG00000011604	gfi1b	55	36.923	ENSSDUG00000001918	znf366	67	36.923
ENSSDUG00000011604	gfi1b	58	38.406	ENSSDUG00000016734	-	60	38.406
ENSSDUG00000011604	gfi1b	78	44.444	ENSSDUG00000011170	znf236	54	44.444
ENSSDUG00000011604	gfi1b	55	43.750	ENSSDUG00000004835	-	74	43.750
ENSSDUG00000011604	gfi1b	54	40.719	ENSSDUG00000011244	-	74	40.719
ENSSDUG00000011604	gfi1b	51	49.057	ENSSDUG00000004089	-	95	41.791
ENSSDUG00000011604	gfi1b	52	45.833	ENSSDUG00000015191	-	85	45.833
ENSSDUG00000011604	gfi1b	64	41.071	ENSSDUG00000013215	-	72	41.071
ENSSDUG00000011604	gfi1b	60	46.018	ENSSDUG00000015013	-	60	46.018
ENSSDUG00000011604	gfi1b	65	43.750	ENSSDUG00000009534	-	67	43.976
ENSSDUG00000011604	gfi1b	51	42.029	ENSSDUG00000002174	-	68	42.029
ENSSDUG00000011604	gfi1b	55	35.833	ENSSDUG00000010305	-	59	35.897
ENSSDUG00000011604	gfi1b	51	39.604	ENSSDUG00000006740	-	75	31.579
ENSSDUG00000011604	gfi1b	54	48.148	ENSSDUG00000008682	-	69	48.148
ENSSDUG00000011604	gfi1b	69	44.375	ENSSDUG00000000946	-	94	44.595
ENSSDUG00000011604	gfi1b	51	43.671	ENSSDUG00000020788	-	65	43.671
ENSSDUG00000011604	gfi1b	61	40.113	ENSSDUG00000013904	-	67	40.113
ENSSDUG00000011604	gfi1b	54	41.875	ENSSDUG00000015254	-	90	42.063
ENSSDUG00000011604	gfi1b	53	41.104	ENSSDUG00000020595	-	87	39.759
ENSSDUG00000011604	gfi1b	57	42.963	ENSSDUG00000006426	-	91	45.000
ENSSDUG00000011604	gfi1b	61	44.375	ENSSDUG00000009439	-	94	44.375
ENSSDUG00000011604	gfi1b	84	45.625	ENSSDUG00000020805	-	87	45.625
ENSSDUG00000011604	gfi1b	59	44.737	ENSSDUG00000007336	-	89	44.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011604	gfi1b	100	84.195	ENSAPOG00000001296	gfi1b	100	84.195	Acanthochromis_polyacanthus
ENSSDUG00000011604	gfi1b	100	71.125	ENSACIG00000002190	gfi1b	100	71.125	Amphilophus_citrinellus
ENSSDUG00000011604	gfi1b	100	84.451	ENSAOCG00000021187	gfi1b	100	84.451	Amphiprion_ocellaris
ENSSDUG00000011604	gfi1b	100	85.061	ENSAPEG00000016196	gfi1b	100	85.061	Amphiprion_percula
ENSSDUG00000011604	gfi1b	100	89.970	ENSATEG00000002534	gfi1b	100	89.970	Anabas_testudineus
ENSSDUG00000011604	gfi1b	100	59.824	ENSAPLG00000003373	GFI1B	100	59.824	Anas_platyrhynchos
ENSSDUG00000011604	gfi1b	100	79.205	ENSACLG00000027053	gfi1b	100	79.205	Astatotilapia_calliptera
ENSSDUG00000011604	gfi1b	100	71.554	ENSAMXG00000037544	GFI1B	100	71.554	Astyanax_mexicanus
ENSSDUG00000011604	gfi1b	100	58.434	ENSCAPG00000010404	GFI1B	100	58.434	Cavia_aperea
ENSSDUG00000011604	gfi1b	100	59.654	ENSCPBG00000021186	GFI1B	100	59.654	Chrysemys_picta_bellii
ENSSDUG00000011604	gfi1b	100	82.424	ENSCSEG00000001315	gfi1b	100	82.424	Cynoglossus_semilaevis
ENSSDUG00000011604	gfi1b	100	77.744	ENSCVAG00000017168	gfi1b	100	77.744	Cyprinodon_variegatus
ENSSDUG00000011604	gfi1b	100	69.388	ENSDARG00000079947	gfi1b	99	85.654	Danio_rerio
ENSSDUG00000011604	gfi1b	62	53.922	ENSEEUG00000012609	-	90	53.922	Erinaceus_europaeus
ENSSDUG00000011604	gfi1b	100	78.338	ENSELUG00000016933	gfi1b	100	78.338	Esox_lucius
ENSSDUG00000011604	gfi1b	100	54.717	ENSFALG00000001479	GFI1B	100	54.717	Ficedula_albicollis
ENSSDUG00000011604	gfi1b	100	85.671	ENSFHEG00000015138	gfi1b	100	85.671	Fundulus_heteroclitus
ENSSDUG00000011604	gfi1b	74	83.951	ENSGMOG00000019123	gfi1b	91	83.951	Gadus_morhua
ENSSDUG00000011604	gfi1b	100	58.960	ENSGALG00000003478	GFI1B	100	58.960	Gallus_gallus
ENSSDUG00000011604	gfi1b	71	94.017	ENSGAFG00000003059	gfi1b	100	94.017	Gambusia_affinis
ENSSDUG00000011604	gfi1b	100	77.620	ENSGACG00000018134	gfi1b	100	77.620	Gasterosteus_aculeatus
ENSSDUG00000011604	gfi1b	100	61.424	ENSGAGG00000021327	GFI1B	100	61.424	Gopherus_agassizii
ENSSDUG00000011604	gfi1b	100	79.205	ENSHBUG00000005451	gfi1b	100	79.205	Haplochromis_burtoni
ENSSDUG00000011604	gfi1b	100	78.963	ENSHCOG00000013713	gfi1b	100	78.963	Hippocampus_comes
ENSSDUG00000011604	gfi1b	100	72.321	ENSIPUG00000012769	gfi1b	100	72.321	Ictalurus_punctatus
ENSSDUG00000011604	gfi1b	99	53.226	ENSJJAG00000016355	Gfi1b	100	53.226	Jaculus_jaculus
ENSSDUG00000011604	gfi1b	100	82.675	ENSKMAG00000016047	gfi1b	100	82.675	Kryptolebias_marmoratus
ENSSDUG00000011604	gfi1b	100	84.290	ENSLBEG00000020297	gfi1b	99	84.894	Labrus_bergylta
ENSSDUG00000011604	gfi1b	100	60.714	ENSLACG00000012207	GFI1B	100	60.714	Latimeria_chalumnae
ENSSDUG00000011604	gfi1b	100	68.343	ENSLOCG00000005750	gfi1b	100	68.343	Lepisosteus_oculatus
ENSSDUG00000011604	gfi1b	100	60.294	ENSLAFG00000022367	GFI1B	100	60.294	Loxodonta_africana
ENSSDUG00000011604	gfi1b	100	92.073	ENSMAMG00000003040	gfi1b	100	92.073	Mastacembelus_armatus
ENSSDUG00000011604	gfi1b	99	79.141	ENSMZEG00005015594	gfi1b	99	79.141	Maylandia_zebra
ENSSDUG00000011604	gfi1b	100	59.302	ENSMGAG00000006129	GFI1B	100	59.302	Meleagris_gallopavo
ENSSDUG00000011604	gfi1b	100	85.106	ENSMMOG00000011764	gfi1b	100	85.106	Mola_mola
ENSSDUG00000011604	gfi1b	100	52.703	ENSMODG00000012600	GFI1B	100	52.703	Monodelphis_domestica
ENSSDUG00000011604	gfi1b	100	89.329	ENSMALG00000004034	gfi1b	100	89.329	Monopterus_albus
ENSSDUG00000011604	gfi1b	99	59.940	ENSNGAG00000003333	Gfi1b	100	59.940	Nannospalax_galili
ENSSDUG00000011604	gfi1b	100	79.331	ENSNBRG00000012391	gfi1b	100	79.331	Neolamprologus_brichardi
ENSSDUG00000011604	gfi1b	100	79.635	ENSONIG00000013011	gfi1b	94	92.179	Oreochromis_niloticus
ENSSDUG00000011604	gfi1b	100	59.459	ENSOANG00000014723	GFI1B	100	59.459	Ornithorhynchus_anatinus
ENSSDUG00000011604	gfi1b	84	75.000	ENSORLG00000014390	GFI1B	96	75.000	Oryzias_latipes
ENSSDUG00000011604	gfi1b	100	80.183	ENSORLG00020003719	GFI1B	100	80.183	Oryzias_latipes_hni
ENSSDUG00000011604	gfi1b	100	79.573	ENSORLG00015017142	gfi1b	100	79.573	Oryzias_latipes_hsok
ENSSDUG00000011604	gfi1b	100	78.049	ENSOMEG00000015149	GFI1B	100	78.659	Oryzias_melastigma
ENSSDUG00000011604	gfi1b	100	57.434	ENSOGAG00000008879	GFI1B	100	57.849	Otolemur_garnettii
ENSSDUG00000011604	gfi1b	100	71.429	ENSPKIG00000007643	gfi1b	100	71.429	Paramormyrops_kingsleyae
ENSSDUG00000011604	gfi1b	100	59.593	ENSPSIG00000012112	GFI1B	100	59.593	Pelodiscus_sinensis
ENSSDUG00000011604	gfi1b	99	68.373	ENSPMGG00000006021	gfi1b	99	69.277	Periophthalmus_magnuspinnatus
ENSSDUG00000011604	gfi1b	100	53.117	ENSPCIG00000019724	GFI1B	100	53.117	Phascolarctos_cinereus
ENSSDUG00000011604	gfi1b	100	83.881	ENSPFOG00000003460	gfi1b	100	83.881	Poecilia_formosa
ENSSDUG00000011604	gfi1b	100	85.410	ENSPLAG00000021960	GFI1B	100	85.410	Poecilia_latipinna
ENSSDUG00000011604	gfi1b	100	82.006	ENSPLAG00000017181	GFI1B	100	82.006	Poecilia_latipinna
ENSSDUG00000011604	gfi1b	100	85.106	ENSPMEG00000019220	gfi1b	100	85.106	Poecilia_mexicana
ENSSDUG00000011604	gfi1b	100	85.106	ENSPMEG00000001556	GFI1B	100	85.106	Poecilia_mexicana
ENSSDUG00000011604	gfi1b	100	84.802	ENSPREG00000021718	gfi1b	100	84.802	Poecilia_reticulata
ENSSDUG00000011604	gfi1b	100	77.879	ENSPNYG00000018422	gfi1b	100	77.879	Pundamilia_nyererei
ENSSDUG00000011604	gfi1b	100	70.536	ENSPNAG00000021118	gfi1b	100	70.536	Pygocentrus_nattereri
ENSSDUG00000011604	gfi1b	100	48.509	ENSSHAG00000006462	GFI1B	100	48.509	Sarcophilus_harrisii
ENSSDUG00000011604	gfi1b	83	65.000	ENSSFOG00015011566	gfi1b	90	65.000	Scleropages_formosus
ENSSDUG00000011604	gfi1b	100	87.842	ENSSMAG00000015181	gfi1b	98	87.842	Scophthalmus_maximus
ENSSDUG00000011604	gfi1b	100	98.777	ENSSLDG00000013823	gfi1b	100	98.777	Seriola_lalandi_dorsalis
ENSSDUG00000011604	gfi1b	100	50.145	ENSSPUG00000016039	GFI1B	100	50.145	Sphenodon_punctatus
ENSSDUG00000011604	gfi1b	100	86.585	ENSSPAG00000022914	gfi1b	100	86.585	Stegastes_partitus
ENSSDUG00000011604	gfi1b	68	48.538	ENSTGUG00000015953	-	87	48.538	Taeniopygia_guttata
ENSSDUG00000011604	gfi1b	51	91.228	ENSTGUG00000005282	-	99	91.228	Taeniopygia_guttata
ENSSDUG00000011604	gfi1b	100	79.878	ENSTRUG00000004525	gfi1b	100	79.878	Takifugu_rubripes
ENSSDUG00000011604	gfi1b	100	78.723	ENSTNIG00000003834	gfi1b	100	78.723	Tetraodon_nigroviridis
ENSSDUG00000011604	gfi1b	100	44.510	ENSTBEG00000014459	GFI1B	100	44.510	Tupaia_belangeri
ENSSDUG00000011604	gfi1b	100	57.101	ENSXETG00000006263	gfi1b	100	58.017	Xenopus_tropicalis
ENSSDUG00000011604	gfi1b	100	84.802	ENSXMAG00000027589	gfi1b	100	84.802	Xiphophorus_maculatus