EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000011734 (Gene tree)
Gene ID: 111220884
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4592 bases
Position: chrBDQW01000078.1:2509491-2514082
Accession: 111220884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016076	RRM_1	PF00076.22	6e-27	1	2
ENSSDUP00000016076	RRM_1	PF00076.22	6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016369	-	1242	XM_022744147	ENSSDUP00000016076	312 (aa)	XP_022599868	UPI000BBF1470

Gene Model

Click here to download ENSSDUG00000011734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000011734	trnau1apa	54	30.114	ENSSDUG00000023544	tia1l	61	30.114
ENSSDUG00000011734	trnau1apa	54	31.429	ENSSDUG00000003453	-	60	31.250
ENSSDUG00000011734	trnau1apa	70	32.143	ENSSDUG00000011965	pabpc1b	57	31.056
ENSSDUG00000011734	trnau1apa	93	42.284	ENSSDUG00000011109	trnau1apb	95	44.242
ENSSDUG00000011734	trnau1apa	69	31.056	ENSSDUG00000012683	pabpc4	69	31.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011734	trnau1apa	94	57.483	ENSG00000180098	TRNAU1AP	96	58.844	Homo_sapiens
ENSSDUG00000011734	trnau1apa	100	87.500	ENSAPOG00000007148	TRNAU1AP	100	87.500	Acanthochromis_polyacanthus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSAMEG00000011367	TRNAU1AP	96	58.844	Ailuropoda_melanoleuca
ENSSDUG00000011734	trnau1apa	91	96.629	ENSACIG00000004161	trnau1apa	93	96.629	Amphilophus_citrinellus
ENSSDUG00000011734	trnau1apa	100	88.462	ENSAOCG00000008056	trnau1apa	100	88.462	Amphiprion_ocellaris
ENSSDUG00000011734	trnau1apa	100	88.462	ENSAPEG00000008868	trnau1apa	100	88.462	Amphiprion_percula
ENSSDUG00000011734	trnau1apa	100	88.750	ENSATEG00000012140	trnau1apa	100	88.125	Anabas_testudineus
ENSSDUG00000011734	trnau1apa	92	56.401	ENSAPLG00000002606	TRNAU1AP	99	58.562	Anas_platyrhynchos
ENSSDUG00000011734	trnau1apa	75	36.170	ENSACAG00000004205	-	86	37.698	Anolis_carolinensis
ENSSDUG00000011734	trnau1apa	93	47.458	ENSACAG00000003995	-	95	49.658	Anolis_carolinensis
ENSSDUG00000011734	trnau1apa	94	57.483	ENSANAG00000018976	TRNAU1AP	85	71.111	Aotus_nancymaae
ENSSDUG00000011734	trnau1apa	100	83.974	ENSACLG00000018515	trnau1apa	100	83.974	Astatotilapia_calliptera
ENSSDUG00000011734	trnau1apa	92	71.591	ENSAMXG00000029240	-	95	71.591	Astyanax_mexicanus
ENSSDUG00000011734	trnau1apa	99	52.174	ENSAMXG00000013750	trnau1apa	97	51.875	Astyanax_mexicanus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSBTAG00000010393	TRNAU1AP	96	58.844	Bos_taurus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCJAG00000009717	TRNAU1AP	87	69.863	Callithrix_jacchus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCAFG00000011735	TRNAU1AP	96	58.844	Canis_familiaris
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCAFG00020023584	TRNAU1AP	96	58.844	Canis_lupus_dingo
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCHIG00000023215	TRNAU1AP	85	71.111	Capra_hircus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSTSYG00000003506	TRNAU1AP	87	69.863	Carlito_syrichta
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCPOG00000001925	TRNAU1AP	85	71.111	Cavia_porcellus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCCAG00000037506	TRNAU1AP	87	69.863	Cebus_capucinus
ENSSDUG00000011734	trnau1apa	94	57.143	ENSCATG00000044617	TRNAU1AP	87	69.863	Cercocebus_atys
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCLAG00000008223	TRNAU1AP	85	71.111	Chinchilla_lanigera
ENSSDUG00000011734	trnau1apa	94	57.143	ENSCSAG00000001014	TRNAU1AP	96	58.503	Chlorocebus_sabaeus
ENSSDUG00000011734	trnau1apa	90	55.944	ENSCPBG00000000121	TRNAU1AP	96	58.304	Chrysemys_picta_bellii
ENSSDUG00000011734	trnau1apa	71	31.429	ENSCSAVG00000011781	-	84	48.750	Ciona_savignyi
ENSSDUG00000011734	trnau1apa	94	48.980	ENSCANG00000041949	TRNAU1AP	94	52.688	Colobus_angolensis_palliatus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCGRG00001004713	Trnau1ap	85	71.111	Cricetulus_griseus_chok1gshd
ENSSDUG00000011734	trnau1apa	94	57.483	ENSCGRG00000014532	Trnau1ap	85	71.111	Cricetulus_griseus_crigri
ENSSDUG00000011734	trnau1apa	100	90.370	ENSCSEG00000006663	trnau1apa	100	76.730	Cynoglossus_semilaevis
ENSSDUG00000011734	trnau1apa	99	79.032	ENSCVAG00000018069	trnau1apa	99	79.677	Cyprinodon_variegatus
ENSSDUG00000011734	trnau1apa	99	51.118	ENSDARG00000101323	trnau1apa	95	50.314	Danio_rerio
ENSSDUG00000011734	trnau1apa	94	57.483	ENSDNOG00000033009	TRNAU1AP	96	58.844	Dasypus_novemcinctus
ENSSDUG00000011734	trnau1apa	56	59.322	ENSDNOG00000047959	-	89	61.047	Dasypus_novemcinctus
ENSSDUG00000011734	trnau1apa	94	54.608	ENSDORG00000006349	Trnau1ap	97	59.091	Dipodomys_ordii
ENSSDUG00000011734	trnau1apa	93	35.890	FBgn0031607	CG15440	50	47.305	Drosophila_melanogaster
ENSSDUG00000011734	trnau1apa	80	54.183	ENSETEG00000012594	TRNAU1AP	95	55.777	Echinops_telfairi
ENSSDUG00000011734	trnau1apa	55	46.591	ENSEBUG00000006349	-	58	46.591	Eptatretus_burgeri
ENSSDUG00000011734	trnau1apa	94	57.483	ENSEASG00005010062	TRNAU1AP	90	69.863	Equus_asinus_asinus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSECAG00000012980	TRNAU1AP	90	69.863	Equus_caballus
ENSSDUG00000011734	trnau1apa	100	74.286	ENSELUG00000017686	trnau1apa	100	76.266	Esox_lucius
ENSSDUG00000011734	trnau1apa	93	81.818	ENSELUG00000022790	-	95	81.818	Esox_lucius
ENSSDUG00000011734	trnau1apa	94	57.483	ENSFCAG00000013401	TRNAU1AP	96	58.844	Felis_catus
ENSSDUG00000011734	trnau1apa	90	56.890	ENSFALG00000001371	TRNAU1AP	96	58.657	Ficedula_albicollis
ENSSDUG00000011734	trnau1apa	94	57.483	ENSFDAG00000018599	TRNAU1AP	85	71.111	Fukomys_damarensis
ENSSDUG00000011734	trnau1apa	78	86.694	ENSFHEG00000018232	trnau1apa	85	84.674	Fundulus_heteroclitus
ENSSDUG00000011734	trnau1apa	100	64.038	ENSGMOG00000016508	trnau1apa	99	64.038	Gadus_morhua
ENSSDUG00000011734	trnau1apa	94	56.566	ENSGALG00000001310	-	96	57.912	Gallus_gallus
ENSSDUG00000011734	trnau1apa	70	38.009	ENSGALG00000012721	C2H6orf52	90	37.453	Gallus_gallus
ENSSDUG00000011734	trnau1apa	80	85.542	ENSGAFG00000004928	trnau1apa	97	84.170	Gambusia_affinis
ENSSDUG00000011734	trnau1apa	100	90.064	ENSGACG00000001443	trnau1apa	100	90.064	Gasterosteus_aculeatus
ENSSDUG00000011734	trnau1apa	90	55.944	ENSGAGG00000004940	TRNAU1AP	96	58.304	Gopherus_agassizii
ENSSDUG00000011734	trnau1apa	94	57.483	ENSGGOG00000003511	TRNAU1AP	87	69.863	Gorilla_gorilla
ENSSDUG00000011734	trnau1apa	100	82.334	ENSHBUG00000002510	trnau1apa	100	82.334	Haplochromis_burtoni
ENSSDUG00000011734	trnau1apa	94	57.483	ENSHGLG00000010380	TRNAU1AP	85	71.111	Heterocephalus_glaber_female
ENSSDUG00000011734	trnau1apa	94	55.442	ENSHGLG00100012699	TRNAU1AP	96	56.803	Heterocephalus_glaber_male
ENSSDUG00000011734	trnau1apa	99	73.101	ENSHCOG00000014770	trnau1apa	99	71.203	Hippocampus_comes
ENSSDUG00000011734	trnau1apa	94	57.483	ENSSTOG00000000079	TRNAU1AP	85	71.111	Ictidomys_tridecemlineatus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSJJAG00000010128	Trnau1ap	96	58.844	Jaculus_jaculus
ENSSDUG00000011734	trnau1apa	100	83.654	ENSKMAG00000001230	trnau1apa	100	84.615	Kryptolebias_marmoratus
ENSSDUG00000011734	trnau1apa	100	81.366	ENSLBEG00000011683	trnau1apa	100	81.424	Labrus_bergylta
ENSSDUG00000011734	trnau1apa	94	51.186	ENSLACG00000005541	TRNAU1AP	96	52.685	Latimeria_chalumnae
ENSSDUG00000011734	trnau1apa	98	59.416	ENSLOCG00000004041	trnau1apa	97	60.678	Lepisosteus_oculatus
ENSSDUG00000011734	trnau1apa	94	57.823	ENSLAFG00000007628	TRNAU1AP	96	59.184	Loxodonta_africana
ENSSDUG00000011734	trnau1apa	94	71.111	ENSMFAG00000043751	TRNAU1AP	87	69.863	Macaca_fascicularis
ENSSDUG00000011734	trnau1apa	94	57.143	ENSMMUG00000006561	TRNAU1AP	85	71.111	Macaca_mulatta
ENSSDUG00000011734	trnau1apa	94	71.111	ENSMNEG00000044201	TRNAU1AP	87	69.863	Macaca_nemestrina
ENSSDUG00000011734	trnau1apa	94	71.111	ENSMLEG00000015649	TRNAU1AP	87	69.863	Mandrillus_leucophaeus
ENSSDUG00000011734	trnau1apa	99	90.127	ENSMAMG00000001247	trnau1apa	100	90.446	Mastacembelus_armatus
ENSSDUG00000011734	trnau1apa	100	83.974	ENSMZEG00005017722	trnau1apa	100	83.974	Maylandia_zebra
ENSSDUG00000011734	trnau1apa	92	56.098	ENSMGAG00000002105	TRNAU1AP	96	58.885	Meleagris_gallopavo
ENSSDUG00000011734	trnau1apa	94	57.483	ENSMICG00000008386	TRNAU1AP	87	69.863	Microcebus_murinus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSMOCG00000011189	Trnau1ap	85	71.111	Microtus_ochrogaster
ENSSDUG00000011734	trnau1apa	100	72.152	ENSMMOG00000012107	trnau1apa	99	72.468	Mola_mola
ENSSDUG00000011734	trnau1apa	94	56.803	ENSMODG00000010927	TRNAU1AP	96	58.163	Monodelphis_domestica
ENSSDUG00000011734	trnau1apa	100	91.111	ENSMALG00000016778	trnau1apa	100	91.111	Monopterus_albus
ENSSDUG00000011734	trnau1apa	94	57.143	MGP_CAROLIEiJ_G0026563	Trnau1ap	92	65.823	Mus_caroli
ENSSDUG00000011734	trnau1apa	94	57.143	ENSMUSG00000028898	Trnau1ap	92	65.823	Mus_musculus
ENSSDUG00000011734	trnau1apa	94	57.143	MGP_PahariEiJ_G0028896	Trnau1ap	93	65.823	Mus_pahari
ENSSDUG00000011734	trnau1apa	94	57.143	MGP_SPRETEiJ_G0027544	Trnau1ap	92	65.823	Mus_spretus
ENSSDUG00000011734	trnau1apa	94	57.823	ENSMPUG00000015511	TRNAU1AP	96	59.184	Mustela_putorius_furo
ENSSDUG00000011734	trnau1apa	94	57.483	ENSMLUG00000012586	TRNAU1AP	96	58.844	Myotis_lucifugus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSNGAG00000015881	Trnau1ap	85	71.111	Nannospalax_galili
ENSSDUG00000011734	trnau1apa	100	71.746	ENSNBRG00000001758	trnau1apa	99	71.746	Neolamprologus_brichardi
ENSSDUG00000011734	trnau1apa	94	71.111	ENSNLEG00000009822	TRNAU1AP	87	69.863	Nomascus_leucogenys
ENSSDUG00000011734	trnau1apa	92	56.446	ENSMEUG00000006117	TRNAU1AP	96	57.840	Notamacropus_eugenii
ENSSDUG00000011734	trnau1apa	51	64.368	ENSOPRG00000007084	-	55	64.368	Ochotona_princeps
ENSSDUG00000011734	trnau1apa	94	57.483	ENSODEG00000002970	TRNAU1AP	85	71.111	Octodon_degus
ENSSDUG00000011734	trnau1apa	80	85.657	ENSONIG00000004715	trnau1apa	97	85.657	Oreochromis_niloticus
ENSSDUG00000011734	trnau1apa	94	45.638	ENSOANG00000005325	-	95	45.946	Ornithorhynchus_anatinus
ENSSDUG00000011734	trnau1apa	94	56.122	ENSOCUG00000011704	-	96	57.483	Oryctolagus_cuniculus
ENSSDUG00000011734	trnau1apa	94	50.680	ENSOCUG00000002353	-	96	50.340	Oryctolagus_cuniculus
ENSSDUG00000011734	trnau1apa	86	46.667	ENSOCUG00000006834	-	97	45.693	Oryctolagus_cuniculus
ENSSDUG00000011734	trnau1apa	100	82.051	ENSORLG00000010428	trnau1apa	100	81.410	Oryzias_latipes
ENSSDUG00000011734	trnau1apa	100	82.051	ENSORLG00020000926	trnau1ap	100	81.410	Oryzias_latipes_hni
ENSSDUG00000011734	trnau1apa	100	82.051	ENSORLG00015009858	trnau1ap	100	81.410	Oryzias_latipes_hsok
ENSSDUG00000011734	trnau1apa	100	80.449	ENSOMEG00000007873	trnau1apa	100	79.808	Oryzias_melastigma
ENSSDUG00000011734	trnau1apa	94	57.483	ENSOGAG00000002274	TRNAU1AP	96	58.844	Otolemur_garnettii
ENSSDUG00000011734	trnau1apa	94	57.483	ENSOARG00000002843	TRNAU1AP	96	58.844	Ovis_aries
ENSSDUG00000011734	trnau1apa	94	57.483	ENSPPAG00000033927	TRNAU1AP	87	69.863	Pan_paniscus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSPPRG00000004416	TRNAU1AP	96	58.844	Panthera_pardus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSPTIG00000016677	TRNAU1AP	96	58.844	Panthera_tigris_altaica
ENSSDUG00000011734	trnau1apa	87	52.920	ENSPTRG00000000434	-	91	53.285	Pan_troglodytes
ENSSDUG00000011734	trnau1apa	94	57.143	ENSPANG00000016019	TRNAU1AP	87	69.863	Papio_anubis
ENSSDUG00000011734	trnau1apa	93	59.932	ENSPKIG00000015511	trnau1apa	93	58.983	Paramormyrops_kingsleyae
ENSSDUG00000011734	trnau1apa	92	81.818	ENSPKIG00000022205	-	94	81.818	Paramormyrops_kingsleyae
ENSSDUG00000011734	trnau1apa	90	57.692	ENSPSIG00000006864	TRNAU1AP	96	58.042	Pelodiscus_sinensis
ENSSDUG00000011734	trnau1apa	97	67.213	ENSPMGG00000023893	trnau1apa	98	64.217	Periophthalmus_magnuspinnatus
ENSSDUG00000011734	trnau1apa	94	57.143	ENSPEMG00000007877	Trnau1ap	85	70.370	Peromyscus_maniculatus_bairdii
ENSSDUG00000011734	trnau1apa	54	52.023	ENSPMAG00000000592	trnau1apa	95	52.023	Petromyzon_marinus
ENSSDUG00000011734	trnau1apa	74	50.644	ENSPMAG00000005934	trnau1apa	96	48.927	Petromyzon_marinus
ENSSDUG00000011734	trnau1apa	99	80.000	ENSPFOG00000008100	trnau1apa	99	80.645	Poecilia_formosa
ENSSDUG00000011734	trnau1apa	96	79.530	ENSPLAG00000010236	trnau1apa	99	80.201	Poecilia_latipinna
ENSSDUG00000011734	trnau1apa	99	77.994	ENSPMEG00000016387	trnau1apa	97	78.641	Poecilia_mexicana
ENSSDUG00000011734	trnau1apa	89	83.158	ENSPREG00000019821	trnau1apa	95	85.556	Poecilia_reticulata
ENSSDUG00000011734	trnau1apa	85	49.064	ENSPPYG00000001639	-	80	71.698	Pongo_abelii
ENSSDUG00000011734	trnau1apa	93	46.207	ENSPCOG00000023470	-	96	47.931	Propithecus_coquereli
ENSSDUG00000011734	trnau1apa	94	57.483	ENSPCOG00000027712	-	96	58.844	Propithecus_coquereli
ENSSDUG00000011734	trnau1apa	94	57.483	ENSPVAG00000017214	TRNAU1AP	96	58.844	Pteropus_vampyrus
ENSSDUG00000011734	trnau1apa	100	84.444	ENSPNYG00000010130	trnau1apa	99	84.444	Pundamilia_nyererei
ENSSDUG00000011734	trnau1apa	99	53.526	ENSPNAG00000024905	trnau1apa	97	52.564	Pygocentrus_nattereri
ENSSDUG00000011734	trnau1apa	92	51.736	ENSRNOG00000055344	Trnau1ap	92	53.125	Rattus_norvegicus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSRBIG00000029083	TRNAU1AP	87	69.863	Rhinopithecus_bieti
ENSSDUG00000011734	trnau1apa	94	57.483	ENSRROG00000029128	TRNAU1AP	87	69.863	Rhinopithecus_roxellana
ENSSDUG00000011734	trnau1apa	94	57.483	ENSSBOG00000021299	TRNAU1AP	87	69.863	Saimiri_boliviensis_boliviensis
ENSSDUG00000011734	trnau1apa	94	56.803	ENSSHAG00000008108	TRNAU1AP	96	58.163	Sarcophilus_harrisii
ENSSDUG00000011734	trnau1apa	100	87.540	ENSSMAG00000020851	trnau1apa	100	90.415	Scophthalmus_maximus
ENSSDUG00000011734	trnau1apa	100	73.397	ENSSLDG00000012101	trnau1apa	99	73.397	Seriola_lalandi_dorsalis
ENSSDUG00000011734	trnau1apa	92	57.491	ENSSARG00000007536	TRNAU1AP	96	58.885	Sorex_araneus
ENSSDUG00000011734	trnau1apa	64	47.739	ENSSPUG00000010415	-	99	46.231	Sphenodon_punctatus
ENSSDUG00000011734	trnau1apa	98	52.443	ENSSPUG00000010400	-	99	53.420	Sphenodon_punctatus
ENSSDUG00000011734	trnau1apa	100	91.026	ENSSPAG00000005029	trnau1apa	100	91.026	Stegastes_partitus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSSSCG00000030284	TRNAU1AP	96	58.844	Sus_scrofa
ENSSDUG00000011734	trnau1apa	70	38.393	ENSTGUG00000005908	-	99	40.179	Taeniopygia_guttata
ENSSDUG00000011734	trnau1apa	92	58.885	ENSTGUG00000000735	-	96	58.333	Taeniopygia_guttata
ENSSDUG00000011734	trnau1apa	100	83.067	ENSTRUG00000003352	trnau1apa	100	81.150	Takifugu_rubripes
ENSSDUG00000011734	trnau1apa	100	76.825	ENSTNIG00000006129	trnau1apa	100	76.825	Tetraodon_nigroviridis
ENSSDUG00000011734	trnau1apa	80	52.191	ENSTBEG00000008049	-	95	52.590	Tupaia_belangeri
ENSSDUG00000011734	trnau1apa	94	57.483	ENSTTRG00000001854	TRNAU1AP	96	58.844	Tursiops_truncatus
ENSSDUG00000011734	trnau1apa	90	57.244	ENSUAMG00000008789	TRNAU1AP	96	58.657	Ursus_americanus
ENSSDUG00000011734	trnau1apa	94	57.483	ENSUMAG00000011068	TRNAU1AP	96	58.844	Ursus_maritimus
ENSSDUG00000011734	trnau1apa	94	50.000	ENSVPAG00000006778	TRNAU1AP	97	51.307	Vicugna_pacos
ENSSDUG00000011734	trnau1apa	93	56.849	ENSVVUG00000012518	TRNAU1AP	89	58.020	Vulpes_vulpes
ENSSDUG00000011734	trnau1apa	99	80.323	ENSXMAG00000017361	trnau1apa	99	80.968	Xiphophorus_maculatus