EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000011768 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: protein FAM46C-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 11128 bases
Position: chrBDQW01000161.1:4721479-4732606
Accession: 111226771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016142	NTP_transf_7	PF07984.12	6.6e-154	1	1
ENSSDUP00000016119	NTP_transf_7	PF07984.12	2e-147	1	2
ENSSDUP00000016119	NTP_transf_7	PF07984.12	2e-147	2	2
ENSSDUP00000016123	NTP_transf_7	PF07984.12	2.1e-147	1	2
ENSSDUP00000016123	NTP_transf_7	PF07984.12	2.1e-147	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016412	-	6155	-	ENSSDUP00000016119	1247 (aa)	-	-
ENSSDUT00000016435	-	1203	-	ENSSDUP00000016142	400 (aa)	-	-
ENSSDUT00000016416	-	5636	XM_022752082	ENSSDUP00000016123	1255 (aa)	XP_022607803	-

Gene Model

Click here to download ENSSDUG00000011768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000011768	-	90	64.246	ENSSDUG00000017177	tent5ba	91	64.246
ENSSDUG00000011768	-	68	62.593	ENSSDUG00000014400	tent5c	89	65.079
ENSSDUG00000011768	-	92	61.230	ENSSDUG00000011243	tent5ab	96	61.230
ENSSDUG00000011768	-	95	62.005	ENSSDUG00000009273	TENT5A	92	62.005
ENSSDUG00000011768	-	99	69.674	ENSSDUG00000014579	tent5d	99	72.596
ENSSDUG00000011768	-	94	61.436	ENSSDUG00000001461	tent5bb	94	61.436

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011768	-	99	61.772	ENSG00000174016	TENT5D	96	66.129	Homo_sapiens
ENSSDUG00000011768	-	95	98.958	ENSAPOG00000008324	-	97	98.974	Acanthochromis_polyacanthus
ENSSDUG00000011768	-	99	70.175	ENSAPOG00000012054	tent5d	98	75.000	Acanthochromis_polyacanthus
ENSSDUG00000011768	-	99	66.414	ENSAMEG00000018974	TENT5D	99	66.414	Ailuropoda_melanoleuca
ENSSDUG00000011768	-	99	91.337	ENSACIG00000013536	TENT5D	97	98.000	Amphilophus_citrinellus
ENSSDUG00000011768	-	98	71.173	ENSACIG00000013537	tent5d	98	74.500	Amphilophus_citrinellus
ENSSDUG00000011768	-	98	70.663	ENSAOCG00000008606	tent5d	97	74.500	Amphiprion_ocellaris
ENSSDUG00000011768	-	95	98.958	ENSAOCG00000018681	-	97	98.974	Amphiprion_ocellaris
ENSSDUG00000011768	-	99	94.236	ENSAPEG00000009667	TENT5D	99	98.974	Amphiprion_percula
ENSSDUG00000011768	-	98	70.918	ENSAPEG00000006630	tent5d	97	75.000	Amphiprion_percula
ENSSDUG00000011768	-	99	93.165	ENSATEG00000019471	TENT5D	99	98.974	Anabas_testudineus
ENSSDUG00000011768	-	99	71.144	ENSATEG00000011859	tent5d	99	75.000	Anabas_testudineus
ENSSDUG00000011768	-	97	69.543	ENSAPLG00000011605	TENT5D	94	72.775	Anas_platyrhynchos
ENSSDUG00000011768	-	100	69.250	ENSACAG00000011230	TENT5D	98	71.282	Anolis_carolinensis
ENSSDUG00000011768	-	99	70.500	ENSACLG00000010424	tent5d	96	74.500	Astatotilapia_calliptera
ENSSDUG00000011768	-	95	97.917	ENSACLG00000023943	-	100	97.500	Astatotilapia_calliptera
ENSSDUG00000011768	-	100	75.250	ENSAMXG00000013579	tent5d	100	80.513	Astyanax_mexicanus
ENSSDUG00000011768	-	99	65.404	ENSBTAG00000045653	TENT5D	96	69.898	Bos_taurus
ENSSDUG00000011768	-	99	62.532	ENSCJAG00000038213	TENT5D	99	66.667	Callithrix_jacchus
ENSSDUG00000011768	-	99	67.172	ENSCAFG00000017299	TENT5D	96	71.429	Canis_familiaris
ENSSDUG00000011768	-	99	67.172	ENSCAFG00020025000	TENT5D	96	71.429	Canis_lupus_dingo
ENSSDUG00000011768	-	99	65.909	ENSCHIG00000019929	TENT5D	96	70.408	Capra_hircus
ENSSDUG00000011768	-	99	62.532	ENSCSAG00000000078	TENT5D	96	68.817	Chlorocebus_sabaeus
ENSSDUG00000011768	-	98	69.466	ENSCPBG00000014492	TENT5D	98	69.643	Chrysemys_picta_bellii
ENSSDUG00000011768	-	99	65.909	ENSCGRG00001012351	Tent5d	96	69.388	Cricetulus_griseus_chok1gshd
ENSSDUG00000011768	-	99	65.909	ENSCGRG00000008903	Tent5d	96	69.388	Cricetulus_griseus_crigri
ENSSDUG00000011768	-	72	55.266	ENSCSEG00000018191	-	86	54.158	Cynoglossus_semilaevis
ENSSDUG00000011768	-	99	91.563	ENSCVAG00000006666	TENT5D	96	98.352	Cyprinodon_variegatus
ENSSDUG00000011768	-	98	71.501	ENSCVAG00000021677	tent5d	99	75.243	Cyprinodon_variegatus
ENSSDUG00000011768	-	99	74.684	ENSDARG00000062830	tent5d	99	78.000	Danio_rerio
ENSSDUG00000011768	-	97	68.380	ENSEASG00005005277	TENT5D	96	72.487	Equus_asinus_asinus
ENSSDUG00000011768	-	72	67.241	ENSEEUG00000014038	-	95	79.070	Erinaceus_europaeus
ENSSDUG00000011768	-	95	81.365	ENSELUG00000005265	-	98	87.245	Esox_lucius
ENSSDUG00000011768	-	99	71.000	ENSELUG00000009690	tent5d	98	74.317	Esox_lucius
ENSSDUG00000011768	-	99	67.929	ENSFCAG00000031837	TENT5D	96	71.939	Felis_catus
ENSSDUG00000011768	-	98	68.193	ENSFALG00000014872	TENT5D	95	71.795	Ficedula_albicollis
ENSSDUG00000011768	-	99	62.025	ENSFDAG00000001595	TENT5D	93	67.204	Fukomys_damarensis
ENSSDUG00000011768	-	99	92.191	ENSFHEG00000015095	TENT5D	97	97.409	Fundulus_heteroclitus
ENSSDUG00000011768	-	99	70.175	ENSFHEG00000002162	tent5d	99	72.947	Fundulus_heteroclitus
ENSSDUG00000011768	-	96	66.495	ENSGMOG00000004826	-	99	68.750	Gadus_morhua
ENSSDUG00000011768	-	98	68.342	ENSGALG00000007157	TENT5D	95	71.795	Gallus_gallus
ENSSDUG00000011768	-	97	71.208	ENSGAFG00000006636	tent5d	96	76.684	Gambusia_affinis
ENSSDUG00000011768	-	100	96.296	ENSGAFG00000001859	-	99	96.954	Gambusia_affinis
ENSSDUG00000011768	-	99	92.695	ENSGACG00000018558	TENT5D	100	95.714	Gasterosteus_aculeatus
ENSSDUG00000011768	-	96	69.610	ENSGACG00000020340	tent5d	96	73.797	Gasterosteus_aculeatus
ENSSDUG00000011768	-	96	68.912	ENSGAGG00000006936	TENT5D	92	73.295	Gopherus_agassizii
ENSSDUG00000011768	-	95	97.917	ENSHBUG00000002204	-	100	96.465	Haplochromis_burtoni
ENSSDUG00000011768	-	99	70.750	ENSHBUG00000004518	tent5d	96	74.500	Haplochromis_burtoni
ENSSDUG00000011768	-	99	62.785	ENSHGLG00000020434	TENT5D	99	62.785	Heterocephalus_glaber_female
ENSSDUG00000011768	-	99	62.785	ENSHGLG00100020559	TENT5D	99	62.785	Heterocephalus_glaber_male
ENSSDUG00000011768	-	98	67.254	ENSHCOG00000006871	-	99	68.396	Hippocampus_comes
ENSSDUG00000011768	-	100	90.000	ENSHCOG00000003335	tent5d	99	95.631	Hippocampus_comes
ENSSDUG00000011768	-	100	74.750	ENSIPUG00000014517	tent5d	100	79.000	Ictalurus_punctatus
ENSSDUG00000011768	-	99	68.939	ENSSTOG00000000603	TENT5D	99	68.939	Ictidomys_tridecemlineatus
ENSSDUG00000011768	-	99	69.652	ENSKMAG00000005667	tent5d	97	74.500	Kryptolebias_marmoratus
ENSSDUG00000011768	-	100	93.300	ENSKMAG00000015597	-	99	96.985	Kryptolebias_marmoratus
ENSSDUG00000011768	-	95	97.917	ENSLBEG00000015628	-	100	71.259	Labrus_bergylta
ENSSDUG00000011768	-	98	69.720	ENSLBEG00000004564	tent5d	97	72.864	Labrus_bergylta
ENSSDUG00000011768	-	100	71.535	ENSLACG00000002943	TENT5D	97	75.385	Latimeria_chalumnae
ENSSDUG00000011768	-	98	74.372	ENSLOCG00000014996	tent5d	98	75.355	Lepisosteus_oculatus
ENSSDUG00000011768	-	97	69.923	ENSLAFG00000027086	TENT5D	96	74.074	Loxodonta_africana
ENSSDUG00000011768	-	99	63.291	ENSMMUG00000043822	TENT5D	96	69.355	Macaca_mulatta
ENSSDUG00000011768	-	99	93.924	ENSMAMG00000014540	TENT5D	98	98.507	Mastacembelus_armatus
ENSSDUG00000011768	-	99	69.674	ENSMAMG00000012072	tent5d	98	74.000	Mastacembelus_armatus
ENSSDUG00000011768	-	99	70.500	ENSMZEG00005015106	tent5d	96	74.500	Maylandia_zebra
ENSSDUG00000011768	-	100	92.000	ENSMZEG00005006756	TENT5D	100	97.500	Maylandia_zebra
ENSSDUG00000011768	-	98	68.593	ENSMGAG00000015812	TENT5D	96	71.795	Meleagris_gallopavo
ENSSDUG00000011768	-	99	69.479	ENSMMOG00000014080	tent5d	99	76.000	Mola_mola
ENSSDUG00000011768	-	100	91.443	ENSMMOG00000009573	TENT5D	97	96.774	Mola_mola
ENSSDUG00000011768	-	99	67.424	ENSMODG00000014584	TENT5D	96	73.438	Monodelphis_domestica
ENSSDUG00000011768	-	99	69.424	ENSMALG00000020690	tent5d	99	70.192	Monopterus_albus
ENSSDUG00000011768	-	95	98.958	ENSMALG00000010458	-	100	78.417	Monopterus_albus
ENSSDUG00000011768	-	99	64.899	MGP_CAROLIEiJ_G0033341	Tent5d	96	68.367	Mus_caroli
ENSSDUG00000011768	-	99	64.899	ENSMUSG00000073007	Tent5d	96	68.367	Mus_musculus
ENSSDUG00000011768	-	99	64.646	MGP_PahariEiJ_G0031877	Tent5d	93	72.131	Mus_pahari
ENSSDUG00000011768	-	99	64.646	MGP_SPRETEiJ_G0034505	Tent5d	96	68.367	Mus_spretus
ENSSDUG00000011768	-	97	69.231	ENSMPUG00000019452	TENT5D	95	75.000	Mustela_putorius_furo
ENSSDUG00000011768	-	95	62.269	ENSMLUG00000000409	TENT5D	93	65.426	Myotis_lucifugus
ENSSDUG00000011768	-	99	69.873	ENSNBRG00000016145	tent5d	98	74.500	Neolamprologus_brichardi
ENSSDUG00000011768	-	100	92.519	ENSNBRG00000020090	TENT5D	98	97.500	Neolamprologus_brichardi
ENSSDUG00000011768	-	99	92.020	ENSONIG00000017646	TENT5D	100	97.500	Oreochromis_niloticus
ENSSDUG00000011768	-	93	64.042	ENSOCUG00000001367	TENT5D	97	66.667	Oryctolagus_cuniculus
ENSSDUG00000011768	-	95	97.917	ENSORLG00000028805	-	100	61.655	Oryzias_latipes
ENSSDUG00000011768	-	99	69.674	ENSORLG00000009311	tent5d	98	73.558	Oryzias_latipes
ENSSDUG00000011768	-	99	92.929	ENSORLG00020018336	TENT5D	98	96.447	Oryzias_latipes_hni
ENSSDUG00000011768	-	98	70.663	ENSORLG00020022252	tent5d	99	71.564	Oryzias_latipes_hni
ENSSDUG00000011768	-	95	97.917	ENSORLG00015013057	-	98	96.954	Oryzias_latipes_hsok
ENSSDUG00000011768	-	99	69.500	ENSORLG00015005598	tent5d	99	71.564	Oryzias_latipes_hsok
ENSSDUG00000011768	-	95	97.917	ENSOMEG00000000367	-	91	95.506	Oryzias_melastigma
ENSSDUG00000011768	-	98	70.380	ENSOMEG00000005309	tent5d	99	72.038	Oryzias_melastigma
ENSSDUG00000011768	-	99	66.162	ENSOARG00000006126	TENT5D	96	70.408	Ovis_aries
ENSSDUG00000011768	-	99	67.929	ENSPPRG00000012522	TENT5D	96	72.449	Panthera_pardus
ENSSDUG00000011768	-	99	67.929	ENSPTIG00000000234	TENT5D	96	72.449	Panthera_tigris_altaica
ENSSDUG00000011768	-	99	61.266	ENSPTRG00000049359	TENT5D	99	66.129	Pan_troglodytes
ENSSDUG00000011768	-	97	68.895	ENSPSIG00000000100	TENT5D	97	69.072	Pelodiscus_sinensis
ENSSDUG00000011768	-	98	68.434	ENSPMGG00000009166	TENT5D	98	70.330	Periophthalmus_magnuspinnatus
ENSSDUG00000011768	-	100	89.500	ENSPMGG00000015198	tent5d	100	94.271	Periophthalmus_magnuspinnatus
ENSSDUG00000011768	-	98	67.684	ENSPCIG00000007683	TENT5D	95	73.333	Phascolarctos_cinereus
ENSSDUG00000011768	-	100	97.354	ENSPLAG00000013331	-	100	96.939	Poecilia_latipinna
ENSSDUG00000011768	-	98	70.918	ENSPLAG00000006567	tent5d	99	73.206	Poecilia_latipinna
ENSSDUG00000011768	-	95	76.289	ENSPMEG00000008111	tent5d	57	75.248	Poecilia_mexicana
ENSSDUG00000011768	-	100	93.250	ENSPMEG00000004458	-	100	97.449	Poecilia_mexicana
ENSSDUG00000011768	-	100	93.250	ENSPMEG00000012102	-	100	97.449	Poecilia_mexicana
ENSSDUG00000011768	-	100	97.354	ENSPREG00000021963	-	99	97.449	Poecilia_reticulata
ENSSDUG00000011768	-	99	70.175	ENSPREG00000021126	tent5d	99	72.727	Poecilia_reticulata
ENSSDUG00000011768	-	59	65.532	ENSPPYG00000020506	-	94	74.286	Pongo_abelii
ENSSDUG00000011768	-	96	66.146	ENSPCAG00000016420	TENT5D	94	72.283	Procavia_capensis
ENSSDUG00000011768	-	99	70.380	ENSPNYG00000021167	tent5d	99	74.500	Pundamilia_nyererei
ENSSDUG00000011768	-	100	92.000	ENSPNYG00000000116	TENT5D	100	97.500	Pundamilia_nyererei
ENSSDUG00000011768	-	99	75.126	ENSPNAG00000010843	tent5d	98	79.500	Pygocentrus_nattereri
ENSSDUG00000011768	-	99	65.404	ENSRNOG00000023637	Tent5d	96	69.388	Rattus_norvegicus
ENSSDUG00000011768	-	98	62.755	ENSSHAG00000017085	TENT5D	94	69.588	Sarcophilus_harrisii
ENSSDUG00000011768	-	99	74.372	ENSSFOG00015009416	TENT5D	99	78.500	Scleropages_formosus
ENSSDUG00000011768	-	92	74.865	ENSSFOG00015011815	tent5d	92	79.888	Scleropages_formosus
ENSSDUG00000011768	-	95	98.936	ENSSMAG00000011657	-	99	98.413	Scophthalmus_maximus
ENSSDUG00000011768	-	96	74.129	ENSSMAG00000017782	TENT5D	97	74.500	Scophthalmus_maximus
ENSSDUG00000011768	-	99	69.674	ENSSLDG00000014810	tent5d	99	72.596	Seriola_lalandi_dorsalis
ENSSDUG00000011768	-	100	100.000	ENSSLDG00000023965	-	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000011768	-	83	68.373	ENSSARG00000002470	TENT5D	94	75.000	Sorex_araneus
ENSSDUG00000011768	-	100	94.279	ENSSPAG00000020743	-	99	98.974	Stegastes_partitus
ENSSDUG00000011768	-	99	70.250	ENSSPAG00000010056	tent5d	99	74.510	Stegastes_partitus
ENSSDUG00000011768	-	99	67.677	ENSSSCG00000012450	TENT5D	96	70.918	Sus_scrofa
ENSSDUG00000011768	-	92	70.380	ENSTGUG00000015102	TENT5D	96	75.287	Taeniopygia_guttata
ENSSDUG00000011768	-	98	92.112	ENSTRUG00000010832	TENT5D	99	96.000	Takifugu_rubripes
ENSSDUG00000011768	-	98	68.782	ENSTRUG00000013717	tent5d	99	71.981	Takifugu_rubripes
ENSSDUG00000011768	-	99	66.915	ENSTNIG00000011815	-	94	72.959	Tetraodon_nigroviridis
ENSSDUG00000011768	-	99	92.079	ENSTNIG00000016869	tent5d	99	96.571	Tetraodon_nigroviridis
ENSSDUG00000011768	-	99	68.182	ENSUAMG00000006884	TENT5D	96	71.939	Ursus_americanus
ENSSDUG00000011768	-	99	67.500	ENSUMAG00000023620	TENT5D	96	71.939	Ursus_maritimus
ENSSDUG00000011768	-	99	61.869	ENSVPAG00000004485	TENT5D	96	67.742	Vicugna_pacos
ENSSDUG00000011768	-	99	67.172	ENSVVUG00000027995	TENT5D	96	71.429	Vulpes_vulpes
ENSSDUG00000011768	-	98	69.133	ENSXETG00000030346	TENT5D	98	74.359	Xenopus_tropicalis
ENSSDUG00000011768	-	99	69.802	ENSXCOG00000006214	tent5d	99	75.000	Xiphophorus_couchianus
ENSSDUG00000011768	-	100	93.766	ENSXCOG00000011712	-	99	97.949	Xiphophorus_couchianus
ENSSDUG00000011768	-	99	69.802	ENSXMAG00000012123	tent5d	99	75.500	Xiphophorus_maculatus
ENSSDUG00000011768	-	100	97.354	ENSXMAG00000004824	-	99	97.949	Xiphophorus_maculatus