EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000011871 (Gene tree)
Gene ID: 111225527
Gene Symbol: tfb1m
Alias: im:7151479|zgc:153625
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 25106 bases
Position: chrBDQW01000149.1:15503615-15528720
Accession: 111225527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016270	RrnaAD	PF00398.20	1.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016572	-	2048	XM_022750460	ENSSDUP00000016270	357 (aa)	XP_022606181	UPI000BBEEBAD

Gene Model

Click here to download ENSSDUG00000011871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011871	tfb1m	96	66.959	ENSG00000029639	TFB1M	99	66.959	Homo_sapiens
ENSSDUG00000011871	tfb1m	100	84.314	ENSAPOG00000015493	tfb1m	100	84.314	Acanthochromis_polyacanthus
ENSSDUG00000011871	tfb1m	94	66.369	ENSAMEG00000012761	TFB1M	97	66.369	Ailuropoda_melanoleuca
ENSSDUG00000011871	tfb1m	99	85.915	ENSACIG00000014290	tfb1m	99	85.915	Amphilophus_citrinellus
ENSSDUG00000011871	tfb1m	100	85.714	ENSAOCG00000004027	tfb1m	100	85.714	Amphiprion_ocellaris
ENSSDUG00000011871	tfb1m	100	85.714	ENSAPEG00000020359	tfb1m	100	85.714	Amphiprion_percula
ENSSDUG00000011871	tfb1m	99	89.888	ENSATEG00000006826	tfb1m	99	89.888	Anabas_testudineus
ENSSDUG00000011871	tfb1m	92	70.517	ENSAPLG00000006328	TFB1M	95	70.517	Anas_platyrhynchos
ENSSDUG00000011871	tfb1m	92	70.821	ENSACAG00000005244	TFB1M	95	70.821	Anolis_carolinensis
ENSSDUG00000011871	tfb1m	92	70.213	ENSANAG00000021469	TFB1M	97	69.345	Aotus_nancymaae
ENSSDUG00000011871	tfb1m	94	89.614	ENSACLG00000018734	tfb1m	94	89.614	Astatotilapia_calliptera
ENSSDUG00000011871	tfb1m	95	75.882	ENSAMXG00000036128	tfb1m	93	75.882	Astyanax_mexicanus
ENSSDUG00000011871	tfb1m	94	68.452	ENSBTAG00000031895	TFB1M	98	74.775	Bos_taurus
ENSSDUG00000011871	tfb1m	55	30.348	WBGene00008455	E02H1.1	57	30.348	Caenorhabditis_elegans
ENSSDUG00000011871	tfb1m	93	42.857	WBGene00020189	tfbm-1	91	42.857	Caenorhabditis_elegans
ENSSDUG00000011871	tfb1m	94	69.461	ENSCJAG00000012540	TFB1M	97	69.461	Callithrix_jacchus
ENSSDUG00000011871	tfb1m	94	68.155	ENSCAFG00000000581	TFB1M	97	68.155	Canis_familiaris
ENSSDUG00000011871	tfb1m	94	68.155	ENSCAFG00020015224	TFB1M	97	68.155	Canis_lupus_dingo
ENSSDUG00000011871	tfb1m	93	69.069	ENSCHIG00000017013	TFB1M	99	69.069	Capra_hircus
ENSSDUG00000011871	tfb1m	94	68.750	ENSTSYG00000012298	TFB1M	97	68.750	Carlito_syrichta
ENSSDUG00000011871	tfb1m	66	48.291	ENSCAPG00000013843	TFB1M	78	48.291	Cavia_aperea
ENSSDUG00000011871	tfb1m	92	67.781	ENSCPOG00000030422	TFB1M	95	67.781	Cavia_porcellus
ENSSDUG00000011871	tfb1m	94	69.162	ENSCCAG00000015250	TFB1M	97	69.162	Cebus_capucinus
ENSSDUG00000011871	tfb1m	94	46.429	ENSCATG00000009009	TFB1M	97	46.131	Cercocebus_atys
ENSSDUG00000011871	tfb1m	94	69.436	ENSCLAG00000004500	TFB1M	98	69.436	Chinchilla_lanigera
ENSSDUG00000011871	tfb1m	90	69.969	ENSCSAG00000013259	TFB1M	99	68.035	Chlorocebus_sabaeus
ENSSDUG00000011871	tfb1m	94	66.766	ENSCHOG00000011245	TFB1M	97	66.766	Choloepus_hoffmanni
ENSSDUG00000011871	tfb1m	95	71.765	ENSCPBG00000016320	TFB1M	98	71.765	Chrysemys_picta_bellii
ENSSDUG00000011871	tfb1m	86	47.231	ENSCING00000003901	-	80	47.231	Ciona_intestinalis
ENSSDUG00000011871	tfb1m	93	46.291	ENSCSAVG00000004721	-	87	46.291	Ciona_savignyi
ENSSDUG00000011871	tfb1m	94	68.563	ENSCANG00000029768	TFB1M	99	68.563	Colobus_angolensis_palliatus
ENSSDUG00000011871	tfb1m	97	67.246	ENSCGRG00001022866	Tfb1m	99	67.246	Cricetulus_griseus_chok1gshd
ENSSDUG00000011871	tfb1m	92	67.273	ENSCGRG00000018084	Tfb1m	99	67.273	Cricetulus_griseus_crigri
ENSSDUG00000011871	tfb1m	100	82.913	ENSCSEG00000000131	tfb1m	99	82.913	Cynoglossus_semilaevis
ENSSDUG00000011871	tfb1m	100	82.633	ENSCVAG00000009201	tfb1m	100	82.633	Cyprinodon_variegatus
ENSSDUG00000011871	tfb1m	96	71.802	ENSDARG00000040727	tfb1m	98	79.167	Danio_rerio
ENSSDUG00000011871	tfb1m	78	60.357	ENSDNOG00000032672	-	97	60.357	Dasypus_novemcinctus
ENSSDUG00000011871	tfb1m	92	67.964	ENSDNOG00000015984	-	92	67.964	Dasypus_novemcinctus
ENSSDUG00000011871	tfb1m	92	69.605	ENSDORG00000012938	Tfb1m	95	69.605	Dipodomys_ordii
ENSSDUG00000011871	tfb1m	90	48.930	FBgn0261381	mtTFB1	96	48.930	Drosophila_melanogaster
ENSSDUG00000011871	tfb1m	95	47.647	ENSETEG00000005709	TFB1M	98	47.647	Echinops_telfairi
ENSSDUG00000011871	tfb1m	89	54.545	ENSEBUG00000010530	tfb1m	94	53.659	Eptatretus_burgeri
ENSSDUG00000011871	tfb1m	57	30.435	ENSEBUG00000006158	dimt1l	77	30.435	Eptatretus_burgeri
ENSSDUG00000011871	tfb1m	96	66.082	ENSEASG00005018887	TFB1M	98	66.082	Equus_asinus_asinus
ENSSDUG00000011871	tfb1m	96	66.667	ENSECAG00000020997	TFB1M	98	66.667	Equus_caballus
ENSSDUG00000011871	tfb1m	94	69.643	ENSEEUG00000014899	TFB1M	99	69.643	Erinaceus_europaeus
ENSSDUG00000011871	tfb1m	96	79.009	ENSELUG00000002752	tfb1m	87	79.009	Esox_lucius
ENSSDUG00000011871	tfb1m	94	67.262	ENSFCAG00000038785	TFB1M	97	67.262	Felis_catus
ENSSDUG00000011871	tfb1m	96	68.023	ENSFALG00000012500	TFB1M	99	68.023	Ficedula_albicollis
ENSSDUG00000011871	tfb1m	90	69.375	ENSFDAG00000016985	TFB1M	97	68.182	Fukomys_damarensis
ENSSDUG00000011871	tfb1m	98	83.476	ENSFHEG00000008407	tfb1m	99	83.476	Fundulus_heteroclitus
ENSSDUG00000011871	tfb1m	95	81.416	ENSGMOG00000018738	tfb1m	97	81.416	Gadus_morhua
ENSSDUG00000011871	tfb1m	91	71.779	ENSGALG00000013647	TFB1M	93	71.779	Gallus_gallus
ENSSDUG00000011871	tfb1m	100	81.232	ENSGAFG00000017997	tfb1m	100	81.232	Gambusia_affinis
ENSSDUG00000011871	tfb1m	100	86.275	ENSGACG00000006884	tfb1m	100	86.275	Gasterosteus_aculeatus
ENSSDUG00000011871	tfb1m	94	72.156	ENSGAGG00000025345	TFB1M	97	72.156	Gopherus_agassizii
ENSSDUG00000011871	tfb1m	96	66.959	ENSGGOG00000012189	TFB1M	99	66.959	Gorilla_gorilla
ENSSDUG00000011871	tfb1m	94	89.318	ENSHBUG00000019396	tfb1m	94	89.318	Haplochromis_burtoni
ENSSDUG00000011871	tfb1m	96	67.544	ENSHGLG00000002028	TFB1M	98	67.544	Heterocephalus_glaber_female
ENSSDUG00000011871	tfb1m	96	67.544	ENSHGLG00100001412	TFB1M	98	67.544	Heterocephalus_glaber_male
ENSSDUG00000011871	tfb1m	94	82.789	ENSHCOG00000014135	tfb1m	96	82.789	Hippocampus_comes
ENSSDUG00000011871	tfb1m	92	75.988	ENSIPUG00000010964	tfb1m	96	75.988	Ictalurus_punctatus
ENSSDUG00000011871	tfb1m	94	69.345	ENSSTOG00000026264	TFB1M	97	69.345	Ictidomys_tridecemlineatus
ENSSDUG00000011871	tfb1m	92	70.213	ENSJJAG00000022171	Tfb1m	93	70.213	Jaculus_jaculus
ENSSDUG00000011871	tfb1m	100	81.793	ENSKMAG00000012667	tfb1m	100	81.793	Kryptolebias_marmoratus
ENSSDUG00000011871	tfb1m	100	85.994	ENSLBEG00000011505	tfb1m	100	85.994	Labrus_bergylta
ENSSDUG00000011871	tfb1m	92	73.860	ENSLACG00000012594	TFB1M	93	73.860	Latimeria_chalumnae
ENSSDUG00000011871	tfb1m	93	69.139	ENSLOCG00000016850	tfb1m	96	69.139	Lepisosteus_oculatus
ENSSDUG00000011871	tfb1m	90	56.832	ENSLAFG00000032309	-	100	56.832	Loxodonta_africana
ENSSDUG00000011871	tfb1m	91	69.325	ENSLAFG00000014035	-	99	66.474	Loxodonta_africana
ENSSDUG00000011871	tfb1m	94	68.452	ENSMFAG00000031968	TFB1M	97	68.452	Macaca_fascicularis
ENSSDUG00000011871	tfb1m	94	68.750	ENSMMUG00000011171	TFB1M	97	68.750	Macaca_mulatta
ENSSDUG00000011871	tfb1m	94	68.452	ENSMNEG00000042278	TFB1M	97	68.452	Macaca_nemestrina
ENSSDUG00000011871	tfb1m	94	68.452	ENSMLEG00000000044	TFB1M	97	68.452	Mandrillus_leucophaeus
ENSSDUG00000011871	tfb1m	99	87.252	ENSMAMG00000009423	tfb1m	99	87.252	Mastacembelus_armatus
ENSSDUG00000011871	tfb1m	94	89.614	ENSMZEG00005005640	tfb1m	89	89.614	Maylandia_zebra
ENSSDUG00000011871	tfb1m	74	76.981	ENSMGAG00000012779	TFB1M	100	76.981	Meleagris_gallopavo
ENSSDUG00000011871	tfb1m	94	70.536	ENSMAUG00000006705	Tfb1m	97	70.536	Mesocricetus_auratus
ENSSDUG00000011871	tfb1m	94	69.643	ENSMICG00000045849	TFB1M	97	69.643	Microcebus_murinus
ENSSDUG00000011871	tfb1m	91	69.632	ENSMOCG00000013879	Tfb1m	97	68.750	Microtus_ochrogaster
ENSSDUG00000011871	tfb1m	99	87.921	ENSMMOG00000002203	tfb1m	99	87.921	Mola_mola
ENSSDUG00000011871	tfb1m	91	71.166	ENSMODG00000008169	TFB1M	100	68.314	Monodelphis_domestica
ENSSDUG00000011871	tfb1m	100	84.874	ENSMALG00000011657	tfb1m	95	84.874	Monopterus_albus
ENSSDUG00000011871	tfb1m	94	68.452	MGP_CAROLIEiJ_G0021018	Tfb1m	97	68.452	Mus_caroli
ENSSDUG00000011871	tfb1m	94	68.452	ENSMUSG00000036983	Tfb1m	97	68.452	Mus_musculus
ENSSDUG00000011871	tfb1m	91	70.245	MGP_PahariEiJ_G0023336	Tfb1m	97	69.048	Mus_pahari
ENSSDUG00000011871	tfb1m	94	68.452	MGP_SPRETEiJ_G0021923	Tfb1m	97	68.452	Mus_spretus
ENSSDUG00000011871	tfb1m	94	67.262	ENSMPUG00000002073	TFB1M	97	67.262	Mustela_putorius_furo
ENSSDUG00000011871	tfb1m	92	68.807	ENSMLUG00000011329	TFB1M	95	68.807	Myotis_lucifugus
ENSSDUG00000011871	tfb1m	98	65.903	ENSNGAG00000015154	Tfb1m	98	65.903	Nannospalax_galili
ENSSDUG00000011871	tfb1m	99	85.794	ENSNBRG00000009004	tfb1m	99	85.794	Neolamprologus_brichardi
ENSSDUG00000011871	tfb1m	96	67.251	ENSNLEG00000034352	TFB1M	99	67.251	Nomascus_leucogenys
ENSSDUG00000011871	tfb1m	95	55.942	ENSMEUG00000001699	-	99	55.942	Notamacropus_eugenii
ENSSDUG00000011871	tfb1m	96	52.047	ENSOPRG00000008921	TFB1M	99	52.047	Ochotona_princeps
ENSSDUG00000011871	tfb1m	94	67.857	ENSODEG00000005915	TFB1M	97	67.857	Octodon_degus
ENSSDUG00000011871	tfb1m	94	90.208	ENSONIG00000008109	tfb1m	97	90.208	Oreochromis_niloticus
ENSSDUG00000011871	tfb1m	94	67.544	ENSOCUG00000012154	TFB1M	100	67.544	Oryctolagus_cuniculus
ENSSDUG00000011871	tfb1m	93	85.498	ENSORLG00000017328	tfb1m	81	85.498	Oryzias_latipes
ENSSDUG00000011871	tfb1m	96	83.284	ENSORLG00020002250	tfb1m	99	83.284	Oryzias_latipes_hni
ENSSDUG00000011871	tfb1m	92	86.322	ENSORLG00015016067	tfb1m	96	86.322	Oryzias_latipes_hsok
ENSSDUG00000011871	tfb1m	98	83.476	ENSOMEG00000015641	tfb1m	99	83.476	Oryzias_melastigma
ENSSDUG00000011871	tfb1m	96	65.015	ENSOGAG00000011681	TFB1M	99	65.015	Otolemur_garnettii
ENSSDUG00000011871	tfb1m	93	67.552	ENSOARG00000004216	TFB1M	99	67.552	Ovis_aries
ENSSDUG00000011871	tfb1m	96	67.251	ENSPPAG00000030834	TFB1M	99	67.251	Pan_paniscus
ENSSDUG00000011871	tfb1m	94	67.257	ENSPPRG00000013578	TFB1M	99	67.257	Panthera_pardus
ENSSDUG00000011871	tfb1m	94	66.964	ENSPTIG00000003540	TFB1M	97	66.964	Panthera_tigris_altaica
ENSSDUG00000011871	tfb1m	96	66.959	ENSPTRG00000018730	TFB1M	99	66.959	Pan_troglodytes
ENSSDUG00000011871	tfb1m	94	68.750	ENSPANG00000007489	TFB1M	97	68.750	Papio_anubis
ENSSDUG00000011871	tfb1m	56	30.049	ENSPKIG00000017870	dimt1l	58	30.049	Paramormyrops_kingsleyae
ENSSDUG00000011871	tfb1m	92	76.596	ENSPKIG00000021117	tfb1m	94	76.596	Paramormyrops_kingsleyae
ENSSDUG00000011871	tfb1m	94	71.856	ENSPSIG00000006643	TFB1M	98	71.856	Pelodiscus_sinensis
ENSSDUG00000011871	tfb1m	97	82.184	ENSPMGG00000011289	tfb1m	99	82.184	Periophthalmus_magnuspinnatus
ENSSDUG00000011871	tfb1m	94	69.048	ENSPEMG00000010410	Tfb1m	97	69.048	Peromyscus_maniculatus_bairdii
ENSSDUG00000011871	tfb1m	55	64.467	ENSPMAG00000008056	tfb1m	90	63.682	Petromyzon_marinus
ENSSDUG00000011871	tfb1m	93	69.369	ENSPCIG00000001010	TFB1M	93	69.369	Phascolarctos_cinereus
ENSSDUG00000011871	tfb1m	100	80.223	ENSPFOG00000005139	tfb1m	100	80.223	Poecilia_formosa
ENSSDUG00000011871	tfb1m	100	80.952	ENSPLAG00000021410	tfb1m	100	80.952	Poecilia_latipinna
ENSSDUG00000011871	tfb1m	100	80.672	ENSPMEG00000020166	tfb1m	100	80.672	Poecilia_mexicana
ENSSDUG00000011871	tfb1m	100	80.952	ENSPREG00000022392	tfb1m	100	80.952	Poecilia_reticulata
ENSSDUG00000011871	tfb1m	96	65.015	ENSPPYG00000017123	TFB1M	99	65.015	Pongo_abelii
ENSSDUG00000011871	tfb1m	83	54.698	ENSPCAG00000007078	TFB1M	99	54.698	Procavia_capensis
ENSSDUG00000011871	tfb1m	94	69.643	ENSPCOG00000028453	TFB1M	97	69.643	Propithecus_coquereli
ENSSDUG00000011871	tfb1m	94	68.750	ENSPVAG00000015818	TFB1M	98	68.750	Pteropus_vampyrus
ENSSDUG00000011871	tfb1m	94	89.021	ENSPNYG00000007330	tfb1m	94	89.021	Pundamilia_nyererei
ENSSDUG00000011871	tfb1m	99	73.315	ENSPNAG00000007507	tfb1m	98	73.315	Pygocentrus_nattereri
ENSSDUG00000011871	tfb1m	94	69.345	ENSRNOG00000056223	Tfb1m	97	69.345	Rattus_norvegicus
ENSSDUG00000011871	tfb1m	94	68.862	ENSRBIG00000039975	TFB1M	99	68.862	Rhinopithecus_bieti
ENSSDUG00000011871	tfb1m	94	68.563	ENSRROG00000033802	TFB1M	99	68.563	Rhinopithecus_roxellana
ENSSDUG00000011871	tfb1m	94	69.643	ENSSBOG00000008663	TFB1M	97	69.643	Saimiri_boliviensis_boliviensis
ENSSDUG00000011871	tfb1m	95	59.882	ENSSHAG00000013259	TFB1M	97	59.882	Sarcophilus_harrisii
ENSSDUG00000011871	tfb1m	96	72.126	ENSSFOG00015009739	tfb1m	99	72.126	Scleropages_formosus
ENSSDUG00000011871	tfb1m	100	87.395	ENSSMAG00000008229	tfb1m	100	87.395	Scophthalmus_maximus
ENSSDUG00000011871	tfb1m	100	98.880	ENSSLDG00000023923	tfb1m	100	98.880	Seriola_lalandi_dorsalis
ENSSDUG00000011871	tfb1m	62	73.423	ENSSARG00000003159	TFB1M	100	73.423	Sorex_araneus
ENSSDUG00000011871	tfb1m	95	67.059	ENSSPUG00000015253	TFB1M	99	67.059	Sphenodon_punctatus
ENSSDUG00000011871	tfb1m	100	85.154	ENSSPAG00000019515	tfb1m	100	85.154	Stegastes_partitus
ENSSDUG00000011871	tfb1m	94	68.263	ENSSSCG00000024361	TFB1M	98	68.263	Sus_scrofa
ENSSDUG00000011871	tfb1m	93	69.069	ENSTGUG00000011136	TFB1M	96	69.069	Taeniopygia_guttata
ENSSDUG00000011871	tfb1m	99	84.419	ENSTRUG00000020334	tfb1m	99	84.419	Takifugu_rubripes
ENSSDUG00000011871	tfb1m	61	87.215	ENSTNIG00000016882	tfb1m	97	87.215	Tetraodon_nigroviridis
ENSSDUG00000011871	tfb1m	92	68.196	ENSTBEG00000008769	TFB1M	94	68.196	Tupaia_belangeri
ENSSDUG00000011871	tfb1m	92	70.031	ENSTTRG00000006327	TFB1M	97	70.031	Tursiops_truncatus
ENSSDUG00000011871	tfb1m	94	66.369	ENSUAMG00000017802	TFB1M	96	66.369	Ursus_americanus
ENSSDUG00000011871	tfb1m	94	66.964	ENSUMAG00000013377	TFB1M	88	66.964	Ursus_maritimus
ENSSDUG00000011871	tfb1m	92	68.502	ENSVPAG00000010148	TFB1M	96	68.502	Vicugna_pacos
ENSSDUG00000011871	tfb1m	94	67.665	ENSVVUG00000007643	TFB1M	98	67.665	Vulpes_vulpes
ENSSDUG00000011871	tfb1m	94	73.591	ENSXETG00000007852	tfb1m	97	73.591	Xenopus_tropicalis
ENSSDUG00000011871	tfb1m	100	81.513	ENSXCOG00000013230	tfb1m	100	81.513	Xiphophorus_couchianus
ENSSDUG00000011871	tfb1m	100	81.232	ENSXMAG00000019222	tfb1m	100	81.232	Xiphophorus_maculatus