EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000011913 (Gene tree)
Gene ID: 111224740
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3894 bases
Position: chrBDQW01000138.1:13232902-13236795
Accession: 111224740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016343	tRNA_Me_trans	PF03054.16	8.6e-136	1	1
ENSSDUP00000016373	tRNA_Me_trans	PF03054.16	1.2e-118	1	2
ENSSDUP00000016373	tRNA_Me_trans	PF03054.16	1.2e-118	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016677	-	1155	-	ENSSDUP00000016373	384 (aa)	-	-
ENSSDUT00000016647	-	1644	XM_022749361	ENSSDUP00000016343	416 (aa)	XP_022605082	UPI000BBE5616

Gene Model

Click here to download ENSSDUG00000011913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011913	trmu	99	70.773	ENSG00000100416	TRMU	99	78.571	Homo_sapiens
ENSSDUG00000011913	trmu	100	89.928	ENSAPOG00000014458	trmu	100	89.928	Acanthochromis_polyacanthus
ENSSDUG00000011913	trmu	96	71.820	ENSAMEG00000003319	TRMU	96	71.820	Ailuropoda_melanoleuca
ENSSDUG00000011913	trmu	100	87.260	ENSACIG00000002101	trmu	100	87.260	Amphilophus_citrinellus
ENSSDUG00000011913	trmu	100	90.647	ENSAOCG00000013155	trmu	100	90.647	Amphiprion_ocellaris
ENSSDUG00000011913	trmu	100	90.408	ENSAPEG00000013350	trmu	100	90.408	Amphiprion_percula
ENSSDUG00000011913	trmu	100	86.538	ENSATEG00000007814	trmu	100	86.538	Anabas_testudineus
ENSSDUG00000011913	trmu	94	70.951	ENSAPLG00000016380	TRMU	99	70.951	Anas_platyrhynchos
ENSSDUG00000011913	trmu	95	71.899	ENSACAG00000007720	TRMU	95	71.899	Anolis_carolinensis
ENSSDUG00000011913	trmu	100	70.913	ENSANAG00000038053	TRMU	98	70.913	Aotus_nancymaae
ENSSDUG00000011913	trmu	100	88.702	ENSACLG00000005395	trmu	100	88.702	Astatotilapia_calliptera
ENSSDUG00000011913	trmu	99	78.780	ENSAMXG00000005282	trmu	99	78.780	Astyanax_mexicanus
ENSSDUG00000011913	trmu	99	70.120	ENSBTAG00000005595	TRMU	99	70.120	Bos_taurus
ENSSDUG00000011913	trmu	91	41.432	WBGene00007114	mttu-1	98	41.432	Caenorhabditis_elegans
ENSSDUG00000011913	trmu	99	69.565	ENSCJAG00000000198	TRMU	98	69.565	Callithrix_jacchus
ENSSDUG00000011913	trmu	100	70.192	ENSCAFG00000000779	TRMU	98	70.024	Canis_familiaris
ENSSDUG00000011913	trmu	100	70.192	ENSCAFG00020009184	TRMU	98	70.024	Canis_lupus_dingo
ENSSDUG00000011913	trmu	100	70.504	ENSCHIG00000017074	TRMU	100	70.504	Capra_hircus
ENSSDUG00000011913	trmu	96	72.070	ENSTSYG00000003853	TRMU	95	72.070	Carlito_syrichta
ENSSDUG00000011913	trmu	94	66.259	ENSCAPG00000013034	TRMU	96	66.259	Cavia_aperea
ENSSDUG00000011913	trmu	97	70.720	ENSCPOG00000020780	TRMU	96	70.720	Cavia_porcellus
ENSSDUG00000011913	trmu	99	69.976	ENSCCAG00000021641	TRMU	98	69.976	Cebus_capucinus
ENSSDUG00000011913	trmu	96	72.431	ENSCATG00000032800	TRMU	95	72.431	Cercocebus_atys
ENSSDUG00000011913	trmu	98	70.833	ENSCLAG00000017269	TRMU	97	70.833	Chinchilla_lanigera
ENSSDUG00000011913	trmu	99	70.773	ENSCSAG00000005279	TRMU	98	70.773	Chlorocebus_sabaeus
ENSSDUG00000011913	trmu	89	71.505	ENSCPBG00000011621	TRMU	93	71.505	Chrysemys_picta_bellii
ENSSDUG00000011913	trmu	94	47.583	ENSCING00000019371	-	96	47.583	Ciona_intestinalis
ENSSDUG00000011913	trmu	99	70.290	ENSCANG00000041645	TRMU	98	70.290	Colobus_angolensis_palliatus
ENSSDUG00000011913	trmu	97	69.383	ENSCGRG00001001739	Trmu	97	69.383	Cricetulus_griseus_chok1gshd
ENSSDUG00000011913	trmu	97	69.705	ENSCGRG00000002781	Trmu	97	69.705	Cricetulus_griseus_crigri
ENSSDUG00000011913	trmu	99	83.092	ENSCSEG00000012382	trmu	99	83.092	Cynoglossus_semilaevis
ENSSDUG00000011913	trmu	100	87.019	ENSCVAG00000001366	trmu	100	87.019	Cyprinodon_variegatus
ENSSDUG00000011913	trmu	100	74.279	ENSDARG00000043734	trmu	100	74.279	Danio_rerio
ENSSDUG00000011913	trmu	64	57.836	ENSDNOG00000047245	-	98	56.429	Dasypus_novemcinctus
ENSSDUG00000011913	trmu	96	71.930	ENSDORG00000007455	Trmu	97	71.930	Dipodomys_ordii
ENSSDUG00000011913	trmu	93	43.896	FBgn0040337	CG3021	95	43.896	Drosophila_melanogaster
ENSSDUG00000011913	trmu	94	56.489	ENSEBUG00000007454	trmu	100	55.620	Eptatretus_burgeri
ENSSDUG00000011913	trmu	97	71.358	ENSEASG00005021725	TRMU	96	71.358	Equus_asinus_asinus
ENSSDUG00000011913	trmu	97	71.358	ENSECAG00000000467	TRMU	96	71.358	Equus_caballus
ENSSDUG00000011913	trmu	69	53.846	ENSEEUG00000000074	-	68	53.846	Erinaceus_europaeus
ENSSDUG00000011913	trmu	100	79.616	ENSELUG00000009464	trmu	99	82.065	Esox_lucius
ENSSDUG00000011913	trmu	96	72.431	ENSFCAG00000006533	TRMU	98	70.433	Felis_catus
ENSSDUG00000011913	trmu	94	70.025	ENSFALG00000010035	TRMU	100	70.025	Ficedula_albicollis
ENSSDUG00000011913	trmu	91	69.474	ENSFDAG00000017472	TRMU	97	69.474	Fukomys_damarensis
ENSSDUG00000011913	trmu	100	86.779	ENSFHEG00000003162	trmu	100	86.779	Fundulus_heteroclitus
ENSSDUG00000011913	trmu	97	72.973	ENSGMOG00000001323	trmu	100	72.973	Gadus_morhua
ENSSDUG00000011913	trmu	95	72.953	ENSGALG00000031922	TRMU	95	72.953	Gallus_gallus
ENSSDUG00000011913	trmu	98	88.020	ENSGAFG00000013331	trmu	98	88.020	Gambusia_affinis
ENSSDUG00000011913	trmu	100	85.816	ENSGACG00000019024	trmu	100	85.816	Gasterosteus_aculeatus
ENSSDUG00000011913	trmu	99	70.773	ENSGGOG00000000203	TRMU	98	70.773	Gorilla_gorilla
ENSSDUG00000011913	trmu	100	88.221	ENSHBUG00000023421	trmu	100	88.221	Haplochromis_burtoni
ENSSDUG00000011913	trmu	99	69.471	ENSHGLG00000009278	TRMU	99	69.471	Heterocephalus_glaber_female
ENSSDUG00000011913	trmu	99	69.471	ENSHGLG00100018863	TRMU	99	69.471	Heterocephalus_glaber_male
ENSSDUG00000011913	trmu	99	85.301	ENSHCOG00000013459	trmu	99	85.301	Hippocampus_comes
ENSSDUG00000011913	trmu	97	79.455	ENSIPUG00000009785	trmu	99	79.455	Ictalurus_punctatus
ENSSDUG00000011913	trmu	99	70.874	ENSSTOG00000010993	TRMU	98	70.874	Ictidomys_tridecemlineatus
ENSSDUG00000011913	trmu	99	69.065	ENSJJAG00000000667	Trmu	100	69.065	Jaculus_jaculus
ENSSDUG00000011913	trmu	100	84.856	ENSKMAG00000008516	trmu	100	84.856	Kryptolebias_marmoratus
ENSSDUG00000011913	trmu	100	87.019	ENSLBEG00000018831	trmu	100	87.019	Labrus_bergylta
ENSSDUG00000011913	trmu	99	74.940	ENSLACG00000013713	TRMU	99	74.940	Latimeria_chalumnae
ENSSDUG00000011913	trmu	96	80.000	ENSLOCG00000016066	trmu	96	80.000	Lepisosteus_oculatus
ENSSDUG00000011913	trmu	98	64.141	ENSLAFG00000005129	TRMU	98	64.141	Loxodonta_africana
ENSSDUG00000011913	trmu	99	71.014	ENSMFAG00000039767	TRMU	98	71.014	Macaca_fascicularis
ENSSDUG00000011913	trmu	99	71.014	ENSMMUG00000000807	TRMU	98	71.014	Macaca_mulatta
ENSSDUG00000011913	trmu	99	71.014	ENSMNEG00000028164	TRMU	98	71.014	Macaca_nemestrina
ENSSDUG00000011913	trmu	96	72.431	ENSMLEG00000033884	TRMU	95	72.431	Mandrillus_leucophaeus
ENSSDUG00000011913	trmu	100	88.221	ENSMAMG00000004717	trmu	100	88.221	Mastacembelus_armatus
ENSSDUG00000011913	trmu	100	88.702	ENSMZEG00005015797	trmu	100	88.702	Maylandia_zebra
ENSSDUG00000011913	trmu	76	71.472	ENSMGAG00000007550	TRMU	95	71.472	Meleagris_gallopavo
ENSSDUG00000011913	trmu	96	70.175	ENSMAUG00000022282	Trmu	96	70.175	Mesocricetus_auratus
ENSSDUG00000011913	trmu	95	71.899	ENSMICG00000029046	TRMU	96	71.899	Microcebus_murinus
ENSSDUG00000011913	trmu	96	70.927	ENSMOCG00000014641	Trmu	96	70.927	Microtus_ochrogaster
ENSSDUG00000011913	trmu	100	83.894	ENSMMOG00000007229	trmu	100	83.894	Mola_mola
ENSSDUG00000011913	trmu	97	65.848	ENSMODG00000007433	TRMU	95	65.848	Monodelphis_domestica
ENSSDUG00000011913	trmu	100	87.981	ENSMALG00000007721	trmu	100	87.981	Monopterus_albus
ENSSDUG00000011913	trmu	97	69.383	MGP_CAROLIEiJ_G0020134	Trmu	97	69.383	Mus_caroli
ENSSDUG00000011913	trmu	100	68.345	ENSMUSG00000022386	Trmu	100	68.345	Mus_musculus
ENSSDUG00000011913	trmu	100	68.106	MGP_PahariEiJ_G0020139	Trmu	100	68.106	Mus_pahari
ENSSDUG00000011913	trmu	100	68.345	MGP_SPRETEiJ_G0021031	Trmu	100	68.345	Mus_spretus
ENSSDUG00000011913	trmu	99	70.120	ENSMPUG00000002523	TRMU	98	70.120	Mustela_putorius_furo
ENSSDUG00000011913	trmu	99	70.048	ENSNGAG00000005132	Trmu	99	70.048	Nannospalax_galili
ENSSDUG00000011913	trmu	100	88.221	ENSNBRG00000022690	trmu	100	88.221	Neolamprologus_brichardi
ENSSDUG00000011913	trmu	97	72.099	ENSNLEG00000015773	TRMU	96	72.099	Nomascus_leucogenys
ENSSDUG00000011913	trmu	79	58.410	ENSMEUG00000000216	TRMU	99	58.410	Notamacropus_eugenii
ENSSDUG00000011913	trmu	99	69.544	ENSODEG00000014745	TRMU	100	69.544	Octodon_degus
ENSSDUG00000011913	trmu	100	88.702	ENSONIG00000009821	trmu	100	88.702	Oreochromis_niloticus
ENSSDUG00000011913	trmu	93	64.872	ENSOANG00000001891	TRMU	99	64.872	Ornithorhynchus_anatinus
ENSSDUG00000011913	trmu	91	70.635	ENSOCUG00000003664	TRMU	95	69.444	Oryctolagus_cuniculus
ENSSDUG00000011913	trmu	99	83.133	ENSORLG00000019015	trmu	99	83.133	Oryzias_latipes
ENSSDUG00000011913	trmu	99	83.614	ENSORLG00020006830	trmu	99	83.614	Oryzias_latipes_hni
ENSSDUG00000011913	trmu	99	83.614	ENSORLG00015003907	trmu	99	83.614	Oryzias_latipes_hsok
ENSSDUG00000011913	trmu	58	84.711	ENSOMEG00000015541	trmu	86	84.711	Oryzias_melastigma
ENSSDUG00000011913	trmu	97	70.864	ENSOGAG00000008096	TRMU	97	70.864	Otolemur_garnettii
ENSSDUG00000011913	trmu	91	69.211	ENSOARG00000019475	TRMU	93	69.211	Ovis_aries
ENSSDUG00000011913	trmu	99	70.773	ENSPPAG00000033944	TRMU	98	70.773	Pan_paniscus
ENSSDUG00000011913	trmu	96	72.682	ENSPPRG00000004197	TRMU	95	72.682	Panthera_pardus
ENSSDUG00000011913	trmu	67	72.924	ENSPTIG00000014122	TRMU	97	74.621	Panthera_tigris_altaica
ENSSDUG00000011913	trmu	99	70.773	ENSPTRG00000014510	TRMU	98	70.773	Pan_troglodytes
ENSSDUG00000011913	trmu	95	72.658	ENSPANG00000023074	TRMU	97	69.589	Papio_anubis
ENSSDUG00000011913	trmu	100	76.202	ENSPKIG00000002849	trmu	100	76.202	Paramormyrops_kingsleyae
ENSSDUG00000011913	trmu	92	70.496	ENSPSIG00000013020	TRMU	100	70.496	Pelodiscus_sinensis
ENSSDUG00000011913	trmu	100	84.135	ENSPMGG00000004083	trmu	100	84.135	Periophthalmus_magnuspinnatus
ENSSDUG00000011913	trmu	100	68.750	ENSPEMG00000014007	Trmu	98	68.750	Peromyscus_maniculatus_bairdii
ENSSDUG00000011913	trmu	94	67.008	ENSPCIG00000009923	TRMU	97	64.819	Phascolarctos_cinereus
ENSSDUG00000011913	trmu	97	82.963	ENSPFOG00000008197	trmu	91	82.963	Poecilia_formosa
ENSSDUG00000011913	trmu	99	86.506	ENSPLAG00000008414	trmu	99	86.506	Poecilia_latipinna
ENSSDUG00000011913	trmu	100	86.779	ENSPMEG00000004326	trmu	100	86.779	Poecilia_mexicana
ENSSDUG00000011913	trmu	99	87.470	ENSPREG00000007980	trmu	99	87.470	Poecilia_reticulata
ENSSDUG00000011913	trmu	99	71.498	ENSPPYG00000011949	TRMU	98	71.498	Pongo_abelii
ENSSDUG00000011913	trmu	93	62.982	ENSPCAG00000013462	TRMU	100	62.982	Procavia_capensis
ENSSDUG00000011913	trmu	96	70.574	ENSPCOG00000016539	TRMU	96	70.574	Propithecus_coquereli
ENSSDUG00000011913	trmu	96	65.586	ENSPVAG00000013202	TRMU	99	64.407	Pteropus_vampyrus
ENSSDUG00000011913	trmu	100	88.221	ENSPNYG00000005629	trmu	100	88.221	Pundamilia_nyererei
ENSSDUG00000011913	trmu	99	78.345	ENSPNAG00000006339	trmu	96	78.345	Pygocentrus_nattereri
ENSSDUG00000011913	trmu	100	68.585	ENSRNOG00000016465	Trmu	100	68.585	Rattus_norvegicus
ENSSDUG00000011913	trmu	99	69.807	ENSRBIG00000038973	TRMU	98	69.807	Rhinopithecus_bieti
ENSSDUG00000011913	trmu	99	70.048	ENSRROG00000004267	TRMU	98	70.048	Rhinopithecus_roxellana
ENSSDUG00000011913	trmu	91	33.582	YDL033C	SLM3	91	33.582	Saccharomyces_cerevisiae
ENSSDUG00000011913	trmu	99	70.120	ENSSBOG00000030184	TRMU	99	70.120	Saimiri_boliviensis_boliviensis
ENSSDUG00000011913	trmu	91	73.421	ENSSFOG00015020664	trmu	99	73.421	Scleropages_formosus
ENSSDUG00000011913	trmu	100	89.423	ENSSMAG00000019450	trmu	100	89.423	Scophthalmus_maximus
ENSSDUG00000011913	trmu	100	99.760	ENSSLDG00000011684	trmu	100	99.760	Seriola_lalandi_dorsalis
ENSSDUG00000011913	trmu	99	61.780	ENSSPUG00000017123	TRMU	98	61.780	Sphenodon_punctatus
ENSSDUG00000011913	trmu	100	87.019	ENSSPAG00000021875	trmu	100	87.019	Stegastes_partitus
ENSSDUG00000011913	trmu	97	70.864	ENSSSCG00000000007	TRMU	99	69.451	Sus_scrofa
ENSSDUG00000011913	trmu	89	72.922	ENSTGUG00000003663	-	100	72.922	Taeniopygia_guttata
ENSSDUG00000011913	trmu	99	86.925	ENSTRUG00000001231	trmu	100	86.925	Takifugu_rubripes
ENSSDUG00000011913	trmu	99	85.612	ENSTNIG00000010484	trmu	98	85.612	Tetraodon_nigroviridis
ENSSDUG00000011913	trmu	72	55.000	ENSTBEG00000011276	-	77	55.000	Tupaia_belangeri
ENSSDUG00000011913	trmu	96	72.682	ENSTTRG00000004160	TRMU	95	72.682	Tursiops_truncatus
ENSSDUG00000011913	trmu	71	73.559	ENSUAMG00000024825	TRMU	98	73.559	Ursus_americanus
ENSSDUG00000011913	trmu	95	60.453	ENSUMAG00000019079	TRMU	98	73.462	Ursus_maritimus
ENSSDUG00000011913	trmu	57	63.014	ENSVPAG00000000685	-	100	63.014	Vicugna_pacos
ENSSDUG00000011913	trmu	100	69.712	ENSVVUG00000024963	TRMU	98	69.712	Vulpes_vulpes
ENSSDUG00000011913	trmu	97	73.399	ENSXETG00000023304	trmu	95	73.399	Xenopus_tropicalis
ENSSDUG00000011913	trmu	99	86.124	ENSXCOG00000015105	trmu	99	86.124	Xiphophorus_couchianus
ENSSDUG00000011913	trmu	99	87.952	ENSXMAG00000006697	trmu	99	87.952	Xiphophorus_maculatus