EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000011986 (Gene tree)
Gene ID: 111221731
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 38406 bases
Position: chrBDQW01000088.1:6289531-6327936
Accession: 111221731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016399	SHQ1	PF04925.15	2.3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016702	-	1970	XM_022745257	ENSSDUP00000016399	611 (aa)	XP_022600978	UPI000BBEB1C5

Gene Model

Click here to download ENSSDUG00000011986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000011986's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000011986	shq1	67	63.221	ENSG00000144736	SHQ1	96	72.917	Homo_sapiens
ENSSDUG00000011986	shq1	100	78.793	ENSAPOG00000000397	shq1	100	78.409	Acanthochromis_polyacanthus
ENSSDUG00000011986	shq1	91	52.548	ENSAMEG00000015140	SHQ1	71	63.107	Ailuropoda_melanoleuca
ENSSDUG00000011986	shq1	100	78.211	ENSACIG00000021249	shq1	100	78.049	Amphilophus_citrinellus
ENSSDUG00000011986	shq1	100	79.677	ENSAOCG00000023311	shq1	100	79.194	Amphiprion_ocellaris
ENSSDUG00000011986	shq1	100	80.195	ENSAPEG00000021686	shq1	100	78.896	Amphiprion_percula
ENSSDUG00000011986	shq1	99	80.858	ENSATEG00000008475	shq1	99	79.967	Anabas_testudineus
ENSSDUG00000011986	shq1	73	58.425	ENSAPLG00000013926	SHQ1	88	57.895	Anas_platyrhynchos
ENSSDUG00000011986	shq1	69	62.877	ENSACAG00000014809	SHQ1	64	62.673	Anolis_carolinensis
ENSSDUG00000011986	shq1	77	59.336	ENSANAG00000029241	SHQ1	75	62.587	Aotus_nancymaae
ENSSDUG00000011986	shq1	77	43.070	ENSANAG00000030500	-	69	45.226	Aotus_nancymaae
ENSSDUG00000011986	shq1	99	76.073	ENSACLG00000023077	shq1	99	72.283	Astatotilapia_calliptera
ENSSDUG00000011986	shq1	70	67.213	ENSAMXG00000043822	shq1	98	54.797	Astyanax_mexicanus
ENSSDUG00000011986	shq1	93	54.296	ENSBTAG00000005436	SHQ1	72	63.942	Bos_taurus
ENSSDUG00000011986	shq1	69	30.876	WBGene00021655	Y48A5A.1	92	31.010	Caenorhabditis_elegans
ENSSDUG00000011986	shq1	67	62.500	ENSCJAG00000015131	SHQ1	74	62.587	Callithrix_jacchus
ENSSDUG00000011986	shq1	70	62.929	ENSCAFG00000006434	SHQ1	72	62.740	Canis_familiaris
ENSSDUG00000011986	shq1	70	63.158	ENSCAFG00020016743	SHQ1	72	62.981	Canis_lupus_dingo
ENSSDUG00000011986	shq1	93	53.469	ENSCHIG00000012271	SHQ1	65	63.942	Capra_hircus
ENSSDUG00000011986	shq1	67	59.806	ENSTSYG00000014439	SHQ1	72	59.806	Carlito_syrichta
ENSSDUG00000011986	shq1	87	46.992	ENSCAPG00000009343	SHQ1	95	62.658	Cavia_aperea
ENSSDUG00000011986	shq1	95	52.196	ENSCPOG00000011443	SHQ1	100	51.510	Cavia_porcellus
ENSSDUG00000011986	shq1	67	54.087	ENSCCAG00000027080	SHQ1	69	53.606	Cebus_capucinus
ENSSDUG00000011986	shq1	77	46.170	ENSCCAG00000036087	-	70	48.276	Cebus_capucinus
ENSSDUG00000011986	shq1	67	63.221	ENSCATG00000041238	SHQ1	71	63.221	Cercocebus_atys
ENSSDUG00000011986	shq1	70	63.616	ENSCLAG00000004206	SHQ1	75	63.510	Chinchilla_lanigera
ENSSDUG00000011986	shq1	52	60.245	ENSCSAG00000011514	SHQ1	66	60.245	Chlorocebus_sabaeus
ENSSDUG00000011986	shq1	70	60.682	ENSCPBG00000006441	SHQ1	100	49.367	Chrysemys_picta_bellii
ENSSDUG00000011986	shq1	64	42.092	ENSCING00000008013	-	94	41.435	Ciona_intestinalis
ENSSDUG00000011986	shq1	71	40.367	ENSCSAVG00000002332	-	97	39.394	Ciona_savignyi
ENSSDUG00000011986	shq1	67	63.158	ENSCANG00000039295	SHQ1	72	62.981	Colobus_angolensis_palliatus
ENSSDUG00000011986	shq1	71	61.905	ENSCGRG00001012583	Shq1	76	61.290	Cricetulus_griseus_chok1gshd
ENSSDUG00000011986	shq1	71	61.905	ENSCGRG00000009849	Shq1	76	61.290	Cricetulus_griseus_crigri
ENSSDUG00000011986	shq1	99	73.871	ENSCSEG00000007829	shq1	99	73.710	Cynoglossus_semilaevis
ENSSDUG00000011986	shq1	99	71.005	ENSCVAG00000020049	shq1	99	71.947	Cyprinodon_variegatus
ENSSDUG00000011986	shq1	99	53.896	ENSDARG00000058522	shq1	72	68.545	Danio_rerio
ENSSDUG00000011986	shq1	78	58.788	ENSDNOG00000033937	SHQ1	72	63.702	Dasypus_novemcinctus
ENSSDUG00000011986	shq1	67	54.567	ENSETEG00000005766	SHQ1	75	54.965	Echinops_telfairi
ENSSDUG00000011986	shq1	61	47.507	ENSEBUG00000005445	shq1	73	49.846	Eptatretus_burgeri
ENSSDUG00000011986	shq1	70	64.073	ENSEASG00005002237	SHQ1	72	63.942	Equus_asinus_asinus
ENSSDUG00000011986	shq1	70	64.073	ENSECAG00000015673	SHQ1	70	63.942	Equus_caballus
ENSSDUG00000011986	shq1	70	62.929	ENSEEUG00000010568	SHQ1	72	62.740	Erinaceus_europaeus
ENSSDUG00000011986	shq1	98	64.333	ENSELUG00000003476	shq1	98	63.115	Esox_lucius
ENSSDUG00000011986	shq1	90	53.779	ENSFCAG00000012781	SHQ1	75	63.279	Felis_catus
ENSSDUG00000011986	shq1	99	50.155	ENSFALG00000013428	SHQ1	70	63.594	Ficedula_albicollis
ENSSDUG00000011986	shq1	67	62.740	ENSFDAG00000005595	SHQ1	66	62.587	Fukomys_damarensis
ENSSDUG00000011986	shq1	98	71.026	ENSFHEG00000017552	shq1	100	72.231	Fundulus_heteroclitus
ENSSDUG00000011986	shq1	64	76.864	ENSGMOG00000007350	shq1	100	76.864	Gadus_morhua
ENSSDUG00000011986	shq1	99	49.365	ENSGALG00000007798	SHQ1	100	49.206	Gallus_gallus
ENSSDUG00000011986	shq1	64	83.548	ENSGACG00000011797	shq1	100	83.290	Gasterosteus_aculeatus
ENSSDUG00000011986	shq1	67	62.500	ENSGGOG00000034818	SHQ1	74	62.587	Gorilla_gorilla
ENSSDUG00000011986	shq1	99	75.743	ENSHBUG00000010857	shq1	99	75.413	Haplochromis_burtoni
ENSSDUG00000011986	shq1	95	51.485	ENSHGLG00000003637	SHQ1	89	52.650	Heterocephalus_glaber_female
ENSSDUG00000011986	shq1	95	52.145	ENSHGLG00100011957	SHQ1	89	52.470	Heterocephalus_glaber_male
ENSSDUG00000011986	shq1	100	67.590	ENSHCOG00000010799	shq1	100	67.264	Hippocampus_comes
ENSSDUG00000011986	shq1	71	68.056	ENSIPUG00000001247	shq1	91	54.701	Ictalurus_punctatus
ENSSDUG00000011986	shq1	70	61.098	ENSSTOG00000010043	SHQ1	82	58.407	Ictidomys_tridecemlineatus
ENSSDUG00000011986	shq1	72	61.435	ENSJJAG00000017611	Shq1	76	63.741	Jaculus_jaculus
ENSSDUG00000011986	shq1	100	74.593	ENSKMAG00000004457	shq1	100	74.715	Kryptolebias_marmoratus
ENSSDUG00000011986	shq1	72	62.749	ENSLACG00000014243	SHQ1	65	63.908	Latimeria_chalumnae
ENSSDUG00000011986	shq1	99	56.556	ENSLOCG00000009970	shq1	99	55.276	Lepisosteus_oculatus
ENSSDUG00000011986	shq1	67	62.981	ENSMFAG00000039148	SHQ1	74	63.048	Macaca_fascicularis
ENSSDUG00000011986	shq1	67	42.476	ENSMFAG00000037396	-	69	41.809	Macaca_fascicularis
ENSSDUG00000011986	shq1	59	61.685	ENSMMUG00000009571	SHQ1	66	61.685	Macaca_mulatta
ENSSDUG00000011986	shq1	70	43.649	ENSMMUG00000021761	-	69	41.809	Macaca_mulatta
ENSSDUG00000011986	shq1	67	62.981	ENSMNEG00000032667	SHQ1	74	63.048	Macaca_nemestrina
ENSSDUG00000011986	shq1	67	62.740	ENSMLEG00000038493	SHQ1	71	62.740	Mandrillus_leucophaeus
ENSSDUG00000011986	shq1	99	78.365	ENSMAMG00000023432	shq1	96	78.526	Mastacembelus_armatus
ENSSDUG00000011986	shq1	99	75.908	ENSMZEG00005008649	shq1	99	75.578	Maylandia_zebra
ENSSDUG00000011986	shq1	99	49.209	ENSMGAG00000009640	SHQ1	71	61.060	Meleagris_gallopavo
ENSSDUG00000011986	shq1	72	60.976	ENSMAUG00000022030	Shq1	76	61.894	Mesocricetus_auratus
ENSSDUG00000011986	shq1	92	51.783	ENSMICG00000009224	SHQ1	71	62.350	Microcebus_murinus
ENSSDUG00000011986	shq1	78	58.776	ENSMOCG00000017836	Shq1	82	59.322	Microtus_ochrogaster
ENSSDUG00000011986	shq1	99	74.876	ENSMMOG00000010569	shq1	99	74.711	Mola_mola
ENSSDUG00000011986	shq1	78	56.033	ENSMODG00000003926	SHQ1	78	58.986	Monodelphis_domestica
ENSSDUG00000011986	shq1	99	80.231	ENSMALG00000008870	shq1	99	79.407	Monopterus_albus
ENSSDUG00000011986	shq1	73	59.912	MGP_CAROLIEiJ_G0028689	Shq1	78	59.121	Mus_caroli
ENSSDUG00000011986	shq1	72	60.976	ENSMUSG00000035378	Shq1	78	60.532	Mus_musculus
ENSSDUG00000011986	shq1	72	61.419	MGP_PahariEiJ_G0022440	Shq1	73	62.110	Mus_pahari
ENSSDUG00000011986	shq1	77	58.969	MGP_SPRETEiJ_G0029717	Shq1	78	60.352	Mus_spretus
ENSSDUG00000011986	shq1	92	54.073	ENSMPUG00000017006	SHQ1	70	63.221	Mustela_putorius_furo
ENSSDUG00000011986	shq1	62	60.769	ENSMLUG00000013539	SHQ1	73	60.465	Myotis_lucifugus
ENSSDUG00000011986	shq1	79	52.165	ENSNGAG00000023317	Shq1	75	55.711	Nannospalax_galili
ENSSDUG00000011986	shq1	84	73.256	ENSNBRG00000024004	shq1	100	72.328	Neolamprologus_brichardi
ENSSDUG00000011986	shq1	77	60.663	ENSNLEG00000002731	SHQ1	71	63.221	Nomascus_leucogenys
ENSSDUG00000011986	shq1	68	57.407	ENSMEUG00000009350	-	70	57.407	Notamacropus_eugenii
ENSSDUG00000011986	shq1	70	61.697	ENSODEG00000009192	SHQ1	79	61.574	Octodon_degus
ENSSDUG00000011986	shq1	99	76.238	ENSONIG00000020264	shq1	99	75.908	Oreochromis_niloticus
ENSSDUG00000011986	shq1	92	53.966	ENSOCUG00000016695	SHQ1	74	64.203	Oryctolagus_cuniculus
ENSSDUG00000011986	shq1	99	65.625	ENSORLG00000023538	shq1	99	64.803	Oryzias_latipes
ENSSDUG00000011986	shq1	99	66.612	ENSORLG00020003697	shq1	99	66.281	Oryzias_latipes_hni
ENSSDUG00000011986	shq1	99	65.139	ENSORLG00015021040	shq1	99	64.638	Oryzias_latipes_hsok
ENSSDUG00000011986	shq1	96	68.889	ENSOMEG00000001225	shq1	97	67.863	Oryzias_melastigma
ENSSDUG00000011986	shq1	78	57.582	ENSOGAG00000003898	SHQ1	76	62.385	Otolemur_garnettii
ENSSDUG00000011986	shq1	70	63.409	ENSOARG00000009547	SHQ1	72	63.246	Ovis_aries
ENSSDUG00000011986	shq1	77	41.615	ENSPPAG00000043263	-	69	43.584	Pan_paniscus
ENSSDUG00000011986	shq1	67	63.462	ENSPPAG00000027714	SHQ1	74	63.510	Pan_paniscus
ENSSDUG00000011986	shq1	91	54.035	ENSPPRG00000004769	SHQ1	75	63.279	Panthera_pardus
ENSSDUG00000011986	shq1	91	51.327	ENSPTIG00000011478	SHQ1	74	59.813	Panthera_tigris_altaica
ENSSDUG00000011986	shq1	77	40.377	ENSPTRG00000048303	-	68	42.233	Pan_troglodytes
ENSSDUG00000011986	shq1	67	63.462	ENSPTRG00000015106	SHQ1	74	63.510	Pan_troglodytes
ENSSDUG00000011986	shq1	67	63.702	ENSPANG00000002881	SHQ1	71	63.702	Papio_anubis
ENSSDUG00000011986	shq1	69	70.686	ENSPKIG00000021517	shq1	72	70.560	Paramormyrops_kingsleyae
ENSSDUG00000011986	shq1	70	60.998	ENSPSIG00000005536	SHQ1	71	61.609	Pelodiscus_sinensis
ENSSDUG00000011986	shq1	99	61.538	ENSPMGG00000008838	shq1	99	61.349	Periophthalmus_magnuspinnatus
ENSSDUG00000011986	shq1	67	62.590	ENSPEMG00000000251	Shq1	76	62.212	Peromyscus_maniculatus_bairdii
ENSSDUG00000011986	shq1	70	59.404	ENSPMAG00000005372	shq1	94	59.712	Petromyzon_marinus
ENSSDUG00000011986	shq1	92	69.627	ENSPFOG00000003118	shq1	99	69.858	Poecilia_formosa
ENSSDUG00000011986	shq1	76	66.953	ENSPMEG00000011076	shq1	99	66.456	Poecilia_mexicana
ENSSDUG00000011986	shq1	84	68.350	ENSPREG00000000591	shq1	94	68.992	Poecilia_reticulata
ENSSDUG00000011986	shq1	78	58.969	ENSPPYG00000013717	SHQ1	74	63.048	Pongo_abelii
ENSSDUG00000011986	shq1	67	63.484	ENSPCAG00000009035	SHQ1	73	63.702	Procavia_capensis
ENSSDUG00000011986	shq1	67	63.070	ENSPCOG00000008415	SHQ1	71	63.070	Propithecus_coquereli
ENSSDUG00000011986	shq1	92	53.913	ENSPVAG00000017392	SHQ1	75	62.818	Pteropus_vampyrus
ENSSDUG00000011986	shq1	99	76.238	ENSPNYG00000003878	shq1	99	75.908	Pundamilia_nyererei
ENSSDUG00000011986	shq1	98	58.456	ENSPNAG00000026840	shq1	99	57.234	Pygocentrus_nattereri
ENSSDUG00000011986	shq1	71	60.899	ENSRNOG00000005433	Shq1	71	61.060	Rattus_norvegicus
ENSSDUG00000011986	shq1	67	60.880	ENSRBIG00000026280	SHQ1	74	61.033	Rhinopithecus_bieti
ENSSDUG00000011986	shq1	67	63.462	ENSRROG00000034126	SHQ1	75	63.510	Rhinopithecus_roxellana
ENSSDUG00000011986	shq1	67	55.288	ENSSBOG00000021038	SHQ1	69	54.808	Saimiri_boliviensis_boliviensis
ENSSDUG00000011986	shq1	70	60.682	ENSSHAG00000015077	SHQ1	77	60.829	Sarcophilus_harrisii
ENSSDUG00000011986	shq1	99	60.561	ENSSFOG00015016241	shq1	99	60.561	Scleropages_formosus
ENSSDUG00000011986	shq1	100	82.410	ENSSMAG00000016151	shq1	100	81.759	Scophthalmus_maximus
ENSSDUG00000011986	shq1	100	97.381	ENSSLDG00000013908	shq1	100	97.381	Seriola_lalandi_dorsalis
ENSSDUG00000011986	shq1	55	59.649	ENSSARG00000007119	SHQ1	60	59.649	Sorex_araneus
ENSSDUG00000011986	shq1	84	49.057	ENSSPUG00000011526	-	61	61.515	Sphenodon_punctatus
ENSSDUG00000011986	shq1	92	54.704	ENSSSCG00000011518	SHQ1	74	63.741	Sus_scrofa
ENSSDUG00000011986	shq1	78	58.907	ENSTGUG00000009933	SHQ1	80	59.408	Taeniopygia_guttata
ENSSDUG00000011986	shq1	99	66.557	ENSTRUG00000009446	shq1	99	65.189	Takifugu_rubripes
ENSSDUG00000011986	shq1	67	75.122	ENSTNIG00000007354	shq1	94	75.234	Tetraodon_nigroviridis
ENSSDUG00000011986	shq1	70	62.700	ENSTTRG00000005320	SHQ1	75	62.587	Tursiops_truncatus
ENSSDUG00000011986	shq1	70	62.850	ENSUMAG00000024031	SHQ1	71	62.899	Ursus_maritimus
ENSSDUG00000011986	shq1	70	50.685	ENSVPAG00000004880	SHQ1	59	60.494	Vicugna_pacos
ENSSDUG00000011986	shq1	70	62.700	ENSVVUG00000013906	SHQ1	72	62.500	Vulpes_vulpes
ENSSDUG00000011986	shq1	99	49.440	ENSXETG00000032215	shq1	99	49.280	Xenopus_tropicalis