EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000012051 (Gene tree)
Gene ID
111230031
Gene Symbol
-
Alias
-
Full Name
chromodomain helicase DNA binding protein 4
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
18448 bases
Position
chrBDQW01000258.1:2107757-2126204
Accession
111230031
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000017650ResIIIPF04851.155.9e-1011
ENSSDUP00000017602ResIIIPF04851.156.1e-1011
ENSSDUP00000016841ResIIIPF04851.151.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000017925-5568XM_022756563ENSSDUP000000176021855 (aa)XP_022612284-
ENSSDUT00000017147-5532-ENSSDUP000000168411843 (aa)--
ENSSDUT00000017973-5547XM_022756562ENSSDUP000000176501848 (aa)XP_022612283-
Gene Model
Click here to download ENSSDUG00000012051's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012051's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000012051-8680.374ENSSDUG00000017526chd59679.545
ENSSDUG00000012051-5365.476ENSSDUG00000005792chd39662.847
ENSSDUG00000012051-8993.607ENSSDUG00000002891chd4a9284.286
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000012051-9376.944ENSG00000111642CHD49981.031Homo_sapiens
ENSSDUG00000012051-9368.655ENSAPOG00000020502-8471.277Acanthochromis_polyacanthus
ENSSDUG00000012051-8495.067ENSAPOG00000008935chd4a9484.390Acanthochromis_polyacanthus
ENSSDUG00000012051-9377.326ENSAMEG00000014179-9578.683Ailuropoda_melanoleuca
ENSSDUG00000012051-9287.441ENSACIG00000019310chd4a9587.719Amphilophus_citrinellus
ENSSDUG00000012051-9981.976ENSACIG00000012387-9895.349Amphilophus_citrinellus
ENSSDUG00000012051-9993.919ENSAOCG00000000507-9792.258Amphiprion_ocellaris
ENSSDUG00000012051-9683.119ENSAOCG00000016412-9783.258Amphiprion_ocellaris
ENSSDUG00000012051-9992.649ENSAPEG00000005957-10092.541Amphiprion_percula
ENSSDUG00000012051-9876.742ENSAPEG00000001757chd4a9582.588Amphiprion_percula
ENSSDUG00000012051-9269.425ENSAPEG00000020306-8180.930Amphiprion_percula
ENSSDUG00000012051-8785.827ENSATEG00000021141-9493.526Anabas_testudineus
ENSSDUG00000012051-9171.062ENSATEG00000000976-9370.757Anabas_testudineus
ENSSDUG00000012051-9380.882ENSATEG00000016428chd4a9782.955Anabas_testudineus
ENSSDUG00000012051-9773.031ENSAPLG00000014146-9479.481Anas_platyrhynchos
ENSSDUG00000012051-9475.485ENSACAG00000006231-9478.302Anolis_carolinensis
ENSSDUG00000012051-9376.569ENSANAG00000035685-9479.793Aotus_nancymaae
ENSSDUG00000012051-9776.840ENSACLG00000015837chd4a9976.329Astatotilapia_calliptera
ENSSDUG00000012051-9696.026ENSACLG00000024468-10088.610Astatotilapia_calliptera
ENSSDUG00000012051-9778.824ENSAMXG00000019969chd4a9483.804Astyanax_mexicanus
ENSSDUG00000012051-9780.086ENSAMXG00000010614-9979.607Astyanax_mexicanus
ENSSDUG00000012051-9376.562ENSBTAG00000014734CHD49479.489Bos_taurus
ENSSDUG00000012051-9376.471ENSCJAG00000008114-9479.684Callithrix_jacchus
ENSSDUG00000012051-7380.538ENSCAFG00000014929CHD49479.793Canis_familiaris
ENSSDUG00000012051-7380.526ENSCAFG00020002892-9479.609Canis_lupus_dingo
ENSSDUG00000012051-9376.842ENSCHIG00000020766-9479.465Capra_hircus
ENSSDUG00000012051-9475.975ENSTSYG00000006069-9379.890Carlito_syrichta
ENSSDUG00000012051-9377.065ENSCPOG00000008504-9580.147Cavia_porcellus
ENSSDUG00000012051-9376.569ENSCCAG00000009686-9479.793Cebus_capucinus
ENSSDUG00000012051-9376.159ENSCATG00000006345-9479.793Cercocebus_atys
ENSSDUG00000012051-9475.349ENSCLAG00000012244-9479.745Chinchilla_lanigera
ENSSDUG00000012051-9376.791ENSCSAG00000010429-9479.673Chlorocebus_sabaeus
ENSSDUG00000012051-7393.805ENSCHOG00000000277-8188.618Choloepus_hoffmanni
ENSSDUG00000012051-9575.978ENSCPBG00000027716-9079.046Chrysemys_picta_bellii
ENSSDUG00000012051-8871.364ENSCSAVG00000004448-9959.611Ciona_savignyi
ENSSDUG00000012051-8189.516ENSCANG00000035317-9479.562Colobus_angolensis_palliatus
ENSSDUG00000012051-9376.507ENSCGRG00001020662Chd49479.489Cricetulus_griseus_chok1gshd
ENSSDUG00000012051-9376.953ENSCGRG00000015920Chd49579.417Cricetulus_griseus_crigri
ENSSDUG00000012051-9367.821ENSCSEG00000018096-9665.220Cynoglossus_semilaevis
ENSSDUG00000012051-9985.692ENSCSEG00000019943-10087.097Cynoglossus_semilaevis
ENSSDUG00000012051-9387.698ENSCSEG00000017173chd4a9285.130Cynoglossus_semilaevis
ENSSDUG00000012051-9565.928ENSCVAG00000016412-9171.242Cyprinodon_variegatus
ENSSDUG00000012051-9985.637ENSCVAG00000001128-10086.613Cyprinodon_variegatus
ENSSDUG00000012051-9392.275ENSCVAG00000004940chd4a9590.987Cyprinodon_variegatus
ENSSDUG00000012051-9878.211ENSDARG00000063535chd4a9582.014Danio_rerio
ENSSDUG00000012051-9376.262ENSDNOG00000001134-9479.805Dasypus_novemcinctus
ENSSDUG00000012051-9973.029ENSDORG00000001847Chd49379.094Dipodomys_ordii
ENSSDUG00000012051-7769.986ENSEBUG00000012670chd4a9077.161Eptatretus_burgeri
ENSSDUG00000012051-9376.269ENSEASG00005016150-9479.757Equus_asinus_asinus
ENSSDUG00000012051-9376.269ENSECAG00000022005CHD49479.757Equus_caballus
ENSSDUG00000012051-8788.538ENSELUG00000021276chd4a9285.824Esox_lucius
ENSSDUG00000012051-9091.406ENSELUG00000018086-9982.078Esox_lucius
ENSSDUG00000012051-9376.791ENSFCAG00000006877-9480.086Felis_catus
ENSSDUG00000012051-7380.993ENSFALG00000004785-9184.219Ficedula_albicollis
ENSSDUG00000012051-7378.279ENSFDAG00000020219-9477.751Fukomys_damarensis
ENSSDUG00000012051-9387.853ENSFHEG00000002013chd4a9480.653Fundulus_heteroclitus
ENSSDUG00000012051-9592.801ENSFHEG00000012736-10092.225Fundulus_heteroclitus
ENSSDUG00000012051-8578.924ENSFHEG00000003253-8978.924Fundulus_heteroclitus
ENSSDUG00000012051-5185.484ENSGMOG00000003394-6987.097Gadus_morhua
ENSSDUG00000012051-7092.857ENSGMOG00000017923-7194.000Gadus_morhua
ENSSDUG00000012051-5592.174ENSGMOG00000015722chd4a9989.694Gadus_morhua
ENSSDUG00000012051-6074.782ENSGALG00000013565-8982.139Gallus_gallus
ENSSDUG00000012051-8498.690ENSGAFG00000014337-10098.298Gambusia_affinis
ENSSDUG00000012051-9876.559ENSGAFG00000002778chd4a9481.495Gambusia_affinis
ENSSDUG00000012051-9677.766ENSGACG00000018705chd4a9977.447Gasterosteus_aculeatus
ENSSDUG00000012051-5889.369ENSGACG00000010099-9989.308Gasterosteus_aculeatus
ENSSDUG00000012051-9575.965ENSGAGG00000001416-9178.986Gopherus_agassizii
ENSSDUG00000012051-9376.624ENSGGOG00000001930CHD49479.854Gorilla_gorilla
ENSSDUG00000012051-8987.854ENSHBUG00000019146chd4a9478.999Haplochromis_burtoni
ENSSDUG00000012051-9988.948ENSHBUG00000016000-10089.324Haplochromis_burtoni
ENSSDUG00000012051-9376.235ENSHGLG00000003093-9479.805Heterocephalus_glaber_female
ENSSDUG00000012051-9376.235ENSHGLG00100007450-9479.805Heterocephalus_glaber_male
ENSSDUG00000012051-8786.521ENSHCOG00000017525-9484.915Hippocampus_comes
ENSSDUG00000012051-7371.529ENSHCOG00000014308-8476.803Hippocampus_comes
ENSSDUG00000012051-9782.310ENSIPUG00000005694chd49583.110Ictalurus_punctatus
ENSSDUG00000012051-9376.927ENSSTOG00000007601-9479.842Ictidomys_tridecemlineatus
ENSSDUG00000012051-9974.478ENSJJAG00000012394Chd49480.171Jaculus_jaculus
ENSSDUG00000012051-8679.535ENSKMAG00000017827-9377.828Kryptolebias_marmoratus
ENSSDUG00000012051-9991.774ENSKMAG00000007932-9392.432Kryptolebias_marmoratus
ENSSDUG00000012051-9285.546ENSKMAG00000019286chd4a9581.154Kryptolebias_marmoratus
ENSSDUG00000012051-8271.169ENSLBEG00000026652-9471.680Labrus_bergylta
ENSSDUG00000012051-9894.068ENSLBEG00000012434CHD49393.645Labrus_bergylta
ENSSDUG00000012051-9876.316ENSLOCG00000007438chd4a9775.592Lepisosteus_oculatus
ENSSDUG00000012051-9374.275ENSLAFG00000022842-9476.628Loxodonta_africana
ENSSDUG00000012051-9376.159ENSMFAG00000003188-9479.793Macaca_fascicularis
ENSSDUG00000012051-9474.165ENSMMUG00000018685-9478.516Macaca_mulatta
ENSSDUG00000012051-9374.417ENSMNEG00000044776-9477.751Macaca_nemestrina
ENSSDUG00000012051-9375.028ENSMLEG00000024661-9478.359Mandrillus_leucophaeus
ENSSDUG00000012051-9996.985ENSMAMG00000002584-9497.388Mastacembelus_armatus
ENSSDUG00000012051-9680.379ENSMAMG00000018954chd4a9383.513Mastacembelus_armatus
ENSSDUG00000012051-8776.419ENSMAMG00000002137-9275.546Mastacembelus_armatus
ENSSDUG00000012051-9779.149ENSMZEG00005001706chd4a9383.223Maylandia_zebra
ENSSDUG00000012051-9696.026ENSMZEG00005017761-10089.276Maylandia_zebra
ENSSDUG00000012051-9475.736ENSMGAG00000014084-9179.323Meleagris_gallopavo
ENSSDUG00000012051-9376.846ENSMICG00000006588-9479.793Microcebus_murinus
ENSSDUG00000012051-9376.953ENSMOCG00000020624Chd49479.444Microtus_ochrogaster
ENSSDUG00000012051-9988.140ENSMMOG00000015971-10087.487Mola_mola
ENSSDUG00000012051-9877.591ENSMMOG00000000073chd4a9978.814Mola_mola
ENSSDUG00000012051-8166.603ENSMMOG00000013429-9066.934Mola_mola
ENSSDUG00000012051-8578.908ENSMODG00000018094-9979.634Monodelphis_domestica
ENSSDUG00000012051-9776.660ENSMALG00000005766chd4a9480.562Monopterus_albus
ENSSDUG00000012051-9994.472ENSMALG00000022494-9992.013Monopterus_albus
ENSSDUG00000012051-9377.100ENSMUSG00000063870Chd49479.818Mus_musculus
ENSSDUG00000012051-9376.932MGP_SPRETEiJ_G0029911Chd49479.781Mus_spretus
ENSSDUG00000012051-9475.583ENSMPUG00000016859-9479.793Mustela_putorius_furo
ENSSDUG00000012051-9475.527ENSMLUG00000014343-9479.732Myotis_lucifugus
ENSSDUG00000012051-9474.665ENSNGAG00000016920Chd49478.102Nannospalax_galili
ENSSDUG00000012051-9695.333ENSNBRG00000021576-10089.032Neolamprologus_brichardi
ENSSDUG00000012051-9375.929ENSNLEG00000004330-9179.853Nomascus_leucogenys
ENSSDUG00000012051-8391.057ENSMEUG00000015294-8191.057Notamacropus_eugenii
ENSSDUG00000012051-7795.370ENSOPRG00000003477-7695.370Ochotona_princeps
ENSSDUG00000012051-9475.460ENSODEG00000003114-9480.049Octodon_degus
ENSSDUG00000012051-9694.928ENSONIG00000012953-9989.583Oreochromis_niloticus
ENSSDUG00000012051-9779.213ENSONIG00000006992chd4a9483.927Oreochromis_niloticus
ENSSDUG00000012051-9675.408ENSOCUG00000008215-9579.732Oryctolagus_cuniculus
ENSSDUG00000012051-9990.786ENSORLG00000012477-10086.888Oryzias_latipes
ENSSDUG00000012051-9080.000ENSORLG00000017190-9380.000Oryzias_latipes
ENSSDUG00000012051-9779.312ENSORLG00000006310chd4a9383.553Oryzias_latipes
ENSSDUG00000012051-7967.984ENSORLG00020011739-9167.295Oryzias_latipes_hni
ENSSDUG00000012051-9990.904ENSORLG00020004891-9491.362Oryzias_latipes_hni
ENSSDUG00000012051-9779.312ENSORLG00020006529chd4a9383.493Oryzias_latipes_hni
ENSSDUG00000012051-9779.343ENSORLG00015019674chd4a9583.049Oryzias_latipes_hsok
ENSSDUG00000012051-9990.904ENSORLG00015010692-10088.086Oryzias_latipes_hsok
ENSSDUG00000012051-9167.368ENSOMEG00000014929-9267.066Oryzias_melastigma
ENSSDUG00000012051-10086.824ENSOMEG00000013408-9490.287Oryzias_melastigma
ENSSDUG00000012051-9384.030ENSOMEG00000016394chd4a9785.551Oryzias_melastigma
ENSSDUG00000012051-9474.370ENSOGAG00000010031-9478.576Otolemur_garnettii
ENSSDUG00000012051-9376.812ENSOARG00000007398-9679.465Ovis_aries
ENSSDUG00000012051-9376.637ENSPPAG00000029007-9480.147Pan_paniscus
ENSSDUG00000012051-9475.320ENSPPRG00000001388-9479.890Panthera_pardus
ENSSDUG00000012051-9376.791ENSPTIG00000010979-9479.793Panthera_tigris_altaica
ENSSDUG00000012051-9376.624ENSPTRG00000004580CHD49479.854Pan_troglodytes
ENSSDUG00000012051-9376.582ENSPANG00000025409-9479.818Papio_anubis
ENSSDUG00000012051-9772.700ENSPKIG00000012023-9573.542Paramormyrops_kingsleyae
ENSSDUG00000012051-9884.927ENSPKIG00000008268chd4a9284.680Paramormyrops_kingsleyae
ENSSDUG00000012051-9873.687ENSPSIG00000015546-9478.576Pelodiscus_sinensis
ENSSDUG00000012051-8867.621ENSPMGG00000007681-9070.904Periophthalmus_magnuspinnatus
ENSSDUG00000012051-9578.167ENSPMGG00000022981chd4a9777.536Periophthalmus_magnuspinnatus
ENSSDUG00000012051-9972.603ENSPEMG00000010290Chd49478.144Peromyscus_maniculatus_bairdii
ENSSDUG00000012051-9277.127ENSPCIG00000001846-9582.456Phascolarctos_cinereus
ENSSDUG00000012051-8570.434ENSPFOG00000016981-9169.705Poecilia_formosa
ENSSDUG00000012051-9591.885ENSPFOG00000013889-10083.981Poecilia_formosa
ENSSDUG00000012051-9878.209ENSPFOG00000009089chd4a9482.966Poecilia_formosa
ENSSDUG00000012051-9095.050ENSPLAG00000012712chd4a9877.091Poecilia_latipinna
ENSSDUG00000012051-9992.655ENSPLAG00000004006-9492.414Poecilia_latipinna
ENSSDUG00000012051-9984.128ENSPMEG00000006064-9688.849Poecilia_mexicana
ENSSDUG00000012051-9093.778ENSPMEG00000009633chd4a9491.064Poecilia_mexicana
ENSSDUG00000012051-9368.528ENSPMEG00000015657-9171.964Poecilia_mexicana
ENSSDUG00000012051-9067.314ENSPREG00000014285-8970.444Poecilia_reticulata
ENSSDUG00000012051-9992.673ENSPREG00000011359-9392.372Poecilia_reticulata
ENSSDUG00000012051-9094.030ENSPREG00000001202chd4a9594.030Poecilia_reticulata
ENSSDUG00000012051-9473.612ENSPPYG00000004192-9577.811Pongo_abelii
ENSSDUG00000012051-7587.349ENSPCAG00000007120-8387.349Procavia_capensis
ENSSDUG00000012051-9376.945ENSPCOG00000018635-9479.548Propithecus_coquereli
ENSSDUG00000012051-9474.013ENSPVAG00000012574-9678.430Pteropus_vampyrus
ENSSDUG00000012051-9995.980ENSPNYG00000023020-9495.918Pundamilia_nyererei
ENSSDUG00000012051-9877.807ENSPNYG00000002663chd4a9382.689Pundamilia_nyererei
ENSSDUG00000012051-9978.507ENSPNAG00000011129-9585.009Pygocentrus_nattereri
ENSSDUG00000012051-9783.029ENSPNAG00000009629chd4a9287.886Pygocentrus_nattereri
ENSSDUG00000012051-9973.956ENSRNOG00000018309Chd49479.157Rattus_norvegicus
ENSSDUG00000012051-9274.487ENSRBIG00000041491-9479.621Rhinopithecus_bieti
ENSSDUG00000012051-9376.539ENSRROG00000042446-9479.927Rhinopithecus_roxellana
ENSSDUG00000012051-9475.712ENSSBOG00000020782-9479.720Saimiri_boliviensis_boliviensis
ENSSDUG00000012051-6584.348ENSSHAG00000015079-9085.088Sarcophilus_harrisii
ENSSDUG00000012051-9784.809ENSSFOG00015002908chd49786.822Scleropages_formosus
ENSSDUG00000012051-8896.635ENSSMAG00000012594chd4a9482.339Scophthalmus_maximus
ENSSDUG00000012051-9367.627ENSSMAG00000017926-8370.282Scophthalmus_maximus
ENSSDUG00000012051-9995.030ENSSMAG00000010969-9994.737Scophthalmus_maximus
ENSSDUG00000012051-9369.066ENSSLDG00000019750-9767.101Seriola_lalandi_dorsalis
ENSSDUG00000012051-9697.115ENSSLDG00000023821-9498.005Seriola_lalandi_dorsalis
ENSSDUG00000012051-8592.952ENSSLDG00000018645chd4a9384.286Seriola_lalandi_dorsalis
ENSSDUG00000012051-6290.173ENSSARG00000012988-6290.173Sorex_araneus
ENSSDUG00000012051-9475.709ENSSPUG00000015131-9478.533Sphenodon_punctatus
ENSSDUG00000012051-8991.163ENSSPAG00000013983chd4a9484.012Stegastes_partitus
ENSSDUG00000012051-9072.229ENSSPAG00000018749-9467.996Stegastes_partitus
ENSSDUG00000012051-9376.159ENSSSCG00000000697-9479.793Sus_scrofa
ENSSDUG00000012051-9277.207ENSTGUG00000013329-9479.915Taeniopygia_guttata
ENSSDUG00000012051-8880.000ENSTRUG00000007623-9180.000Takifugu_rubripes
ENSSDUG00000012051-9885.165ENSTRUG00000007202-10085.575Takifugu_rubripes
ENSSDUG00000012051-9794.256ENSTNIG00000008031-9594.310Tetraodon_nigroviridis
ENSSDUG00000012051-9868.832ENSTNIG00000004095-9968.702Tetraodon_nigroviridis
ENSSDUG00000012051-8577.044ENSTBEG00000011379-8977.543Tupaia_belangeri
ENSSDUG00000012051-9594.872ENSTTRG00000016102-9484.211Tursiops_truncatus
ENSSDUG00000012051-8885.950ENSUAMG00000016452-9186.667Ursus_americanus
ENSSDUG00000012051-8885.950ENSUMAG00000005336-9086.667Ursus_maritimus
ENSSDUG00000012051-7380.255ENSVVUG00000011414-9479.793Vulpes_vulpes
ENSSDUG00000012051-6681.245ENSXETG00000026410chd49985.991Xenopus_tropicalis
ENSSDUG00000012051-5268.948ENSXETG00000018961-8977.370Xenopus_tropicalis
ENSSDUG00000012051-9786.598ENSXCOG00000019269-10086.529Xiphophorus_couchianus
ENSSDUG00000012051-9786.248ENSXMAG00000011263-10086.201Xiphophorus_maculatus
ENSSDUG00000012051-8680.374ENSXMAG00000014686-8979.545Xiphophorus_maculatus
ENSSDUG00000012051-7881.459ENSXMAG00000001037chd4a9479.497Xiphophorus_maculatus

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