EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012074 (Gene tree)
Gene ID: 111232301
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 9879 bases
Position: chrBDQW01000330.1:1752361-1762239
Accession: 111232301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016555	AARP2CN	PF08142.12	1.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016861	-	2884	XM_022759750	ENSSDUP00000016555	837 (aa)	XP_022615471	UPI000BBE4464

Gene Model

Click here to download ENSSDUG00000012074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012074	tsr1	99	54.916	ENSG00000167721	TSR1	99	54.850	Homo_sapiens
ENSSDUG00000012074	tsr1	99	91.737	ENSAPOG00000020891	tsr1	100	91.737	Acanthochromis_polyacanthus
ENSSDUG00000012074	tsr1	99	55.090	ENSAMEG00000007599	TSR1	99	54.502	Ailuropoda_melanoleuca
ENSSDUG00000012074	tsr1	99	87.066	ENSACIG00000007090	tsr1	100	86.108	Amphilophus_citrinellus
ENSSDUG00000012074	tsr1	99	91.737	ENSAOCG00000023284	tsr1	100	91.617	Amphiprion_ocellaris
ENSSDUG00000012074	tsr1	93	91.774	ENSAPEG00000008452	tsr1	100	91.645	Amphiprion_percula
ENSSDUG00000012074	tsr1	99	89.549	ENSATEG00000021961	tsr1	100	89.192	Anabas_testudineus
ENSSDUG00000012074	tsr1	90	59.235	ENSAPLG00000013422	TSR1	99	58.793	Anas_platyrhynchos
ENSSDUG00000012074	tsr1	71	50.250	ENSACAG00000000859	TSR1	92	49.251	Anolis_carolinensis
ENSSDUG00000012074	tsr1	99	54.862	ENSANAG00000031071	TSR1	99	55.024	Aotus_nancymaae
ENSSDUG00000012074	tsr1	100	88.796	ENSACLG00000007595	tsr1	100	87.962	Astatotilapia_calliptera
ENSSDUG00000012074	tsr1	50	76.905	ENSAMXG00000008470	tsr1	90	76.832	Astyanax_mexicanus
ENSSDUG00000012074	tsr1	98	55.048	ENSBTAG00000004225	TSR1	99	55.928	Bos_taurus
ENSSDUG00000012074	tsr1	65	30.738	WBGene00022021	Y61A9LA.10	51	30.453	Caenorhabditis_elegans
ENSSDUG00000012074	tsr1	97	54.634	ENSCJAG00000012456	TSR1	98	54.800	Callithrix_jacchus
ENSSDUG00000012074	tsr1	89	52.785	ENSCAFG00000019273	-	100	55.556	Canis_familiaris
ENSSDUG00000012074	tsr1	99	55.048	ENSCAFG00000002106	-	99	54.038	Canis_familiaris
ENSSDUG00000012074	tsr1	99	54.928	ENSCAFG00020009728	TSR1	99	53.919	Canis_lupus_dingo
ENSSDUG00000012074	tsr1	99	55.462	ENSCHIG00000023935	TSR1	99	56.423	Capra_hircus
ENSSDUG00000012074	tsr1	99	55.462	ENSTSYG00000005468	TSR1	99	55.516	Carlito_syrichta
ENSSDUG00000012074	tsr1	92	55.297	ENSCPOG00000014833	TSR1	99	55.039	Cavia_porcellus
ENSSDUG00000012074	tsr1	92	53.806	ENSCCAG00000028962	TSR1	98	53.856	Cebus_capucinus
ENSSDUG00000012074	tsr1	99	54.850	ENSCATG00000044262	TSR1	99	54.785	Cercocebus_atys
ENSSDUG00000012074	tsr1	99	55.342	ENSCLAG00000005567	TSR1	99	55.222	Chinchilla_lanigera
ENSSDUG00000012074	tsr1	99	54.970	ENSCSAG00000013788	TSR1	99	54.904	Chlorocebus_sabaeus
ENSSDUG00000012074	tsr1	98	57.799	ENSCPBG00000020363	TSR1	98	56.419	Chrysemys_picta_bellii
ENSSDUG00000012074	tsr1	97	44.284	ENSCING00000020658	-	100	43.976	Ciona_intestinalis
ENSSDUG00000012074	tsr1	95	44.390	ENSCSAVG00000001875	-	100	43.650	Ciona_savignyi
ENSSDUG00000012074	tsr1	87	70.707	ENSCANG00000033056	TSR1	99	51.456	Colobus_angolensis_palliatus
ENSSDUG00000012074	tsr1	99	54.502	ENSCGRG00001023942	Tsr1	99	54.502	Cricetulus_griseus_chok1gshd
ENSSDUG00000012074	tsr1	99	82.854	ENSCSEG00000013009	tsr1	100	82.974	Cynoglossus_semilaevis
ENSSDUG00000012074	tsr1	99	85.234	ENSCVAG00000000506	tsr1	100	84.754	Cyprinodon_variegatus
ENSSDUG00000012074	tsr1	99	76.066	ENSDARG00000007744	tsr1	100	75.948	Danio_rerio
ENSSDUG00000012074	tsr1	99	56.062	ENSDNOG00000004715	TSR1	99	58.310	Dasypus_novemcinctus
ENSSDUG00000012074	tsr1	95	49.002	ENSDORG00000023234	-	99	47.146	Dipodomys_ordii
ENSSDUG00000012074	tsr1	99	55.342	ENSDORG00000016371	-	99	53.772	Dipodomys_ordii
ENSSDUG00000012074	tsr1	96	43.696	FBgn0037073	Tsr1	96	43.329	Drosophila_melanogaster
ENSSDUG00000012074	tsr1	88	68.197	ENSETEG00000017534	TSR1	89	68.197	Echinops_telfairi
ENSSDUG00000012074	tsr1	94	51.580	ENSEBUG00000013731	TSR1	97	51.075	Eptatretus_burgeri
ENSSDUG00000012074	tsr1	99	56.182	ENSEASG00005009302	TSR1	97	56.062	Equus_asinus_asinus
ENSSDUG00000012074	tsr1	99	55.288	ENSECAG00000009114	TSR1	99	56.010	Equus_caballus
ENSSDUG00000012074	tsr1	100	76.868	ENSELUG00000020984	tsr1	96	76.786	Esox_lucius
ENSSDUG00000012074	tsr1	99	54.207	ENSFCAG00000006313	TSR1	99	54.394	Felis_catus
ENSSDUG00000012074	tsr1	99	57.957	ENSFALG00000006532	TSR1	99	57.447	Ficedula_albicollis
ENSSDUG00000012074	tsr1	99	55.048	ENSFDAG00000006038	TSR1	99	54.928	Fukomys_damarensis
ENSSDUG00000012074	tsr1	100	85.185	ENSFHEG00000003626	tsr1	100	85.185	Fundulus_heteroclitus
ENSSDUG00000012074	tsr1	99	74.374	ENSGMOG00000010336	tsr1	100	73.540	Gadus_morhua
ENSSDUG00000012074	tsr1	100	83.671	ENSGAFG00000012993	tsr1	100	82.598	Gambusia_affinis
ENSSDUG00000012074	tsr1	99	83.986	ENSGACG00000010843	tsr1	100	84.223	Gasterosteus_aculeatus
ENSSDUG00000012074	tsr1	98	56.711	ENSGAGG00000025619	-	99	56.235	Gopherus_agassizii
ENSSDUG00000012074	tsr1	99	55.942	ENSGGOG00000001704	TSR1	99	55.090	Gorilla_gorilla
ENSSDUG00000012074	tsr1	100	89.273	ENSHBUG00000017904	tsr1	100	88.439	Haplochromis_burtoni
ENSSDUG00000012074	tsr1	96	49.193	ENSHGLG00000015688	-	98	48.447	Heterocephalus_glaber_female
ENSSDUG00000012074	tsr1	99	55.102	ENSHGLG00000012806	-	99	54.622	Heterocephalus_glaber_female
ENSSDUG00000012074	tsr1	99	55.102	ENSHGLG00100015392	TSR1	99	54.622	Heterocephalus_glaber_male
ENSSDUG00000012074	tsr1	99	82.275	ENSHCOG00000001432	tsr1	100	81.198	Hippocampus_comes
ENSSDUG00000012074	tsr1	99	76.429	ENSIPUG00000004618	tsr1	100	75.595	Ictalurus_punctatus
ENSSDUG00000012074	tsr1	99	56.558	ENSSTOG00000011819	TSR1	99	55.875	Ictidomys_tridecemlineatus
ENSSDUG00000012074	tsr1	91	52.742	ENSJJAG00000019505	Tsr1	95	52.089	Jaculus_jaculus
ENSSDUG00000012074	tsr1	100	84.845	ENSKMAG00000005763	tsr1	100	84.726	Kryptolebias_marmoratus
ENSSDUG00000012074	tsr1	100	90.119	ENSLBEG00000021823	tsr1	100	90.238	Labrus_bergylta
ENSSDUG00000012074	tsr1	98	58.273	ENSLACG00000002197	TSR1	99	57.074	Latimeria_chalumnae
ENSSDUG00000012074	tsr1	93	80.263	ENSLOCG00000006491	TSR1	99	80.263	Lepisosteus_oculatus
ENSSDUG00000012074	tsr1	99	55.090	ENSMFAG00000021330	TSR1	99	55.024	Macaca_fascicularis
ENSSDUG00000012074	tsr1	99	54.970	ENSMMUG00000017519	TSR1	99	54.904	Macaca_mulatta
ENSSDUG00000012074	tsr1	99	55.090	ENSMNEG00000031382	TSR1	99	55.024	Macaca_nemestrina
ENSSDUG00000012074	tsr1	99	54.731	ENSMLEG00000036733	TSR1	99	54.665	Mandrillus_leucophaeus
ENSSDUG00000012074	tsr1	100	89.349	ENSMAMG00000017918	tsr1	100	88.994	Mastacembelus_armatus
ENSSDUG00000012074	tsr1	99	88.305	ENSMZEG00005007477	tsr1	100	87.709	Maylandia_zebra
ENSSDUG00000012074	tsr1	99	58.126	ENSMGAG00000005576	TSR1	100	56.840	Meleagris_gallopavo
ENSSDUG00000012074	tsr1	99	55.957	ENSMICG00000012943	TSR1	99	55.716	Microcebus_murinus
ENSSDUG00000012074	tsr1	99	54.958	ENSMOCG00000022764	Tsr1	99	54.480	Microtus_ochrogaster
ENSSDUG00000012074	tsr1	99	88.038	ENSMMOG00000014280	tsr1	100	88.158	Mola_mola
ENSSDUG00000012074	tsr1	97	57.524	ENSMODG00000010658	TSR1	99	57.455	Monodelphis_domestica
ENSSDUG00000012074	tsr1	99	89.354	ENSMALG00000011681	tsr1	100	88.756	Monopterus_albus
ENSSDUG00000012074	tsr1	99	54.022	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.644	Mus_caroli
ENSSDUG00000012074	tsr1	99	54.742	ENSMUSG00000038335	Tsr1	99	54.361	Mus_musculus
ENSSDUG00000012074	tsr1	99	54.994	MGP_PahariEiJ_G0017864	Tsr1	99	54.611	Mus_pahari
ENSSDUG00000012074	tsr1	99	54.633	MGP_SPRETEiJ_G0017570	Tsr1	99	54.251	Mus_spretus
ENSSDUG00000012074	tsr1	81	57.895	ENSMPUG00000013000	TSR1	100	56.772	Mustela_putorius_furo
ENSSDUG00000012074	tsr1	99	56.663	ENSMLUG00000003505	TSR1	99	55.569	Myotis_lucifugus
ENSSDUG00000012074	tsr1	100	89.631	ENSNBRG00000020728	tsr1	100	88.677	Neolamprologus_brichardi
ENSSDUG00000012074	tsr1	99	51.208	ENSNLEG00000017184	TSR1	96	67.049	Nomascus_leucogenys
ENSSDUG00000012074	tsr1	98	52.878	ENSMEUG00000015828	TSR1	99	52.998	Notamacropus_eugenii
ENSSDUG00000012074	tsr1	99	88.200	ENSONIG00000013131	tsr1	100	87.247	Oreochromis_niloticus
ENSSDUG00000012074	tsr1	99	55.836	ENSOCUG00000014256	TSR1	99	55.836	Oryctolagus_cuniculus
ENSSDUG00000012074	tsr1	100	85.561	ENSORLG00000004926	tsr1	100	85.561	Oryzias_latipes
ENSSDUG00000012074	tsr1	100	84.845	ENSORLG00020008792	tsr1	100	84.845	Oryzias_latipes_hni
ENSSDUG00000012074	tsr1	100	85.561	ENSORLG00015013838	tsr1	100	85.561	Oryzias_latipes_hsok
ENSSDUG00000012074	tsr1	100	84.881	ENSOMEG00000004830	tsr1	100	84.524	Oryzias_melastigma
ENSSDUG00000012074	tsr1	99	55.000	ENSOGAG00000004492	TSR1	99	55.119	Otolemur_garnettii
ENSSDUG00000012074	tsr1	99	55.462	ENSOARG00000015437	TSR1	97	56.423	Ovis_aries
ENSSDUG00000012074	tsr1	99	54.916	ENSPPAG00000036355	TSR1	99	54.850	Pan_paniscus
ENSSDUG00000012074	tsr1	99	53.966	ENSPPRG00000015519	-	99	54.436	Panthera_pardus
ENSSDUG00000012074	tsr1	99	53.966	ENSPTIG00000010608	TSR1	99	54.436	Panthera_tigris_altaica
ENSSDUG00000012074	tsr1	99	54.916	ENSPTRG00000008547	TSR1	99	54.850	Pan_troglodytes
ENSSDUG00000012074	tsr1	99	53.421	ENSPANG00000024463	TSR1	99	52.335	Papio_anubis
ENSSDUG00000012074	tsr1	99	72.640	ENSPKIG00000013972	tsr1	100	72.162	Paramormyrops_kingsleyae
ENSSDUG00000012074	tsr1	87	57.279	ENSPSIG00000018258	TSR1	99	56.054	Pelodiscus_sinensis
ENSSDUG00000012074	tsr1	99	82.635	ENSPMGG00000011577	tsr1	99	81.393	Periophthalmus_magnuspinnatus
ENSSDUG00000012074	tsr1	99	54.513	ENSPEMG00000018033	Tsr1	99	53.902	Peromyscus_maniculatus_bairdii
ENSSDUG00000012074	tsr1	98	56.954	ENSPCIG00000009357	TSR1	97	57.297	Phascolarctos_cinereus
ENSSDUG00000012074	tsr1	99	82.697	ENSPFOG00000004483	TSR1	100	81.087	Poecilia_formosa
ENSSDUG00000012074	tsr1	100	83.472	ENSPLAG00000022320	tsr1	100	83.829	Poecilia_latipinna
ENSSDUG00000012074	tsr1	100	83.591	ENSPMEG00000004577	tsr1	100	83.948	Poecilia_mexicana
ENSSDUG00000012074	tsr1	97	84.945	ENSPREG00000010354	tsr1	96	85.452	Poecilia_reticulata
ENSSDUG00000012074	tsr1	99	50.833	ENSPPYG00000007792	TSR1	99	50.415	Pongo_abelii
ENSSDUG00000012074	tsr1	51	67.442	ENSPCAG00000012973	-	69	67.500	Procavia_capensis
ENSSDUG00000012074	tsr1	99	55.114	ENSPCOG00000017928	TSR1	99	55.410	Propithecus_coquereli
ENSSDUG00000012074	tsr1	99	55.102	ENSPVAG00000002162	TSR1	99	55.822	Pteropus_vampyrus
ENSSDUG00000012074	tsr1	100	89.035	ENSPNYG00000016163	tsr1	100	88.200	Pundamilia_nyererei
ENSSDUG00000012074	tsr1	99	76.647	ENSPNAG00000008659	tsr1	99	76.407	Pygocentrus_nattereri
ENSSDUG00000012074	tsr1	99	54.327	ENSRNOG00000002980	Tsr1	99	54.272	Rattus_norvegicus
ENSSDUG00000012074	tsr1	99	55.822	ENSRBIG00000040016	TSR1	99	54.742	Rhinopithecus_bieti
ENSSDUG00000012074	tsr1	99	54.970	ENSRROG00000030361	TSR1	99	54.622	Rhinopithecus_roxellana
ENSSDUG00000012074	tsr1	99	55.222	ENSSBOG00000020785	TSR1	99	55.462	Saimiri_boliviensis_boliviensis
ENSSDUG00000012074	tsr1	98	57.914	ENSSHAG00000011394	TSR1	99	56.954	Sarcophilus_harrisii
ENSSDUG00000012074	tsr1	99	76.287	ENSSFOG00015005455	tsr1	100	76.168	Scleropages_formosus
ENSSDUG00000012074	tsr1	99	89.461	ENSSMAG00000009504	tsr1	100	89.461	Scophthalmus_maximus
ENSSDUG00000012074	tsr1	100	98.807	ENSSLDG00000002031	tsr1	100	98.807	Seriola_lalandi_dorsalis
ENSSDUG00000012074	tsr1	92	57.371	ENSSARG00000000759	TSR1	93	57.371	Sorex_araneus
ENSSDUG00000012074	tsr1	99	57.920	ENSSPUG00000007042	TSR1	100	56.593	Sphenodon_punctatus
ENSSDUG00000012074	tsr1	99	90.346	ENSSPAG00000021951	tsr1	100	91.418	Stegastes_partitus
ENSSDUG00000012074	tsr1	99	56.220	ENSSSCG00000038534	TSR1	99	56.783	Sus_scrofa
ENSSDUG00000012074	tsr1	89	60.106	ENSTGUG00000005883	TSR1	100	58.762	Taeniopygia_guttata
ENSSDUG00000012074	tsr1	99	84.910	ENSTRUG00000004665	tsr1	100	84.910	Takifugu_rubripes
ENSSDUG00000012074	tsr1	99	85.024	ENSTNIG00000016196	tsr1	100	83.774	Tetraodon_nigroviridis
ENSSDUG00000012074	tsr1	66	72.308	ENSTBEG00000015275	-	66	72.308	Tupaia_belangeri
ENSSDUG00000012074	tsr1	99	55.462	ENSTTRG00000001177	TSR1	99	56.303	Tursiops_truncatus
ENSSDUG00000012074	tsr1	99	55.276	ENSUAMG00000025160	TSR1	99	54.819	Ursus_americanus
ENSSDUG00000012074	tsr1	95	55.031	ENSUMAG00000009294	TSR1	98	54.110	Ursus_maritimus
ENSSDUG00000012074	tsr1	83	50.000	ENSVPAG00000000228	TSR1	99	47.881	Vicugna_pacos
ENSSDUG00000012074	tsr1	99	55.168	ENSVVUG00000021767	TSR1	99	54.157	Vulpes_vulpes
ENSSDUG00000012074	tsr1	99	53.191	ENSXETG00000023797	tsr1	100	52.482	Xenopus_tropicalis
ENSSDUG00000012074	tsr1	99	82.656	ENSXCOG00000009635	tsr1	100	82.177	Xiphophorus_couchianus
ENSSDUG00000012074	tsr1	100	83.652	ENSXMAG00000001397	tsr1	97	83.771	Xiphophorus_maculatus