EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012078 (Gene tree)
Gene ID: 111218883
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5772 bases
Position: chrBDQW01000052.1:6104432-6110203
Accession: 111218883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016549	MMR_HSR1	PF01926.23	5.4e-06	1	1
ENSSDUP00000016534	MMR_HSR1	PF01926.23	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000016829	-	1676	-	ENSSDUP00000016522	220 (aa)	-	-
ENSSDUT00000016853	-	618	-	ENSSDUP00000016549	205 (aa)	-	-
ENSSDUT00000016860	-	1698	-	ENSSDUP00000016554	227 (aa)	-	-
ENSSDUT00000016840	-	2284	XM_022741367	ENSSDUP00000016534	233 (aa)	XP_022597088	UPI000BBE161E

Gene Model

Click here to download ENSSDUG00000012078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012078	rabl3	100	86.017	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSSDUG00000012078	rabl3	100	98.291	ENSAPOG00000024479	rabl3	100	98.291	Acanthochromis_polyacanthus
ENSSDUG00000012078	rabl3	100	86.864	ENSAMEG00000004809	RABL3	100	86.864	Ailuropoda_melanoleuca
ENSSDUG00000012078	rabl3	100	93.562	ENSACIG00000014343	rabl3	100	93.562	Amphilophus_citrinellus
ENSSDUG00000012078	rabl3	100	98.291	ENSAOCG00000011851	rabl3	100	98.291	Amphiprion_ocellaris
ENSSDUG00000012078	rabl3	100	98.291	ENSAPEG00000011214	rabl3	100	98.291	Amphiprion_percula
ENSSDUG00000012078	rabl3	100	98.712	ENSATEG00000003503	rabl3	100	98.712	Anabas_testudineus
ENSSDUG00000012078	rabl3	100	80.932	ENSACAG00000011313	-	100	80.932	Anolis_carolinensis
ENSSDUG00000012078	rabl3	100	88.136	ENSANAG00000027278	RABL3	100	88.136	Aotus_nancymaae
ENSSDUG00000012078	rabl3	100	97.854	ENSACLG00000009820	rabl3	100	97.854	Astatotilapia_calliptera
ENSSDUG00000012078	rabl3	100	94.421	ENSAMXG00000038716	rabl3	100	94.421	Astyanax_mexicanus
ENSSDUG00000012078	rabl3	100	88.559	ENSBTAG00000015898	RABL3	100	88.559	Bos_taurus
ENSSDUG00000012078	rabl3	100	88.136	ENSCJAG00000008611	RABL3	100	88.136	Callithrix_jacchus
ENSSDUG00000012078	rabl3	100	87.712	ENSCAFG00000011292	RABL3	89	87.712	Canis_familiaris
ENSSDUG00000012078	rabl3	100	87.712	ENSCAFG00020006397	RABL3	100	87.712	Canis_lupus_dingo
ENSSDUG00000012078	rabl3	100	88.559	ENSCHIG00000017365	RABL3	100	88.559	Capra_hircus
ENSSDUG00000012078	rabl3	100	86.441	ENSCPOG00000009645	RABL3	100	86.441	Cavia_porcellus
ENSSDUG00000012078	rabl3	100	86.441	ENSCATG00000032561	RABL3	100	86.441	Cercocebus_atys
ENSSDUG00000012078	rabl3	100	86.017	ENSCLAG00000010855	RABL3	100	86.017	Chinchilla_lanigera
ENSSDUG00000012078	rabl3	99	86.266	ENSCSAG00000007155	RABL3	100	86.266	Chlorocebus_sabaeus
ENSSDUG00000012078	rabl3	100	87.288	ENSCPBG00000001999	RABL3	100	87.288	Chrysemys_picta_bellii
ENSSDUG00000012078	rabl3	100	86.441	ENSCANG00000031684	RABL3	100	86.441	Colobus_angolensis_palliatus
ENSSDUG00000012078	rabl3	100	83.898	ENSCGRG00001021537	Rabl3	100	83.898	Cricetulus_griseus_chok1gshd
ENSSDUG00000012078	rabl3	100	83.898	ENSCGRG00000002114	Rabl3	100	83.898	Cricetulus_griseus_crigri
ENSSDUG00000012078	rabl3	100	90.476	ENSCSEG00000014982	rabl3	100	90.476	Cynoglossus_semilaevis
ENSSDUG00000012078	rabl3	100	90.732	ENSCVAG00000009904	rabl3	100	90.732	Cyprinodon_variegatus
ENSSDUG00000012078	rabl3	100	93.991	ENSDARG00000040959	rabl3	100	93.991	Danio_rerio
ENSSDUG00000012078	rabl3	100	85.593	ENSDNOG00000008174	RABL3	100	85.593	Dasypus_novemcinctus
ENSSDUG00000012078	rabl3	100	86.017	ENSETEG00000010206	RABL3	100	86.017	Echinops_telfairi
ENSSDUG00000012078	rabl3	100	88.136	ENSECAG00000023059	RABL3	100	88.136	Equus_caballus
ENSSDUG00000012078	rabl3	100	82.203	ENSEEUG00000002897	RABL3	100	82.203	Erinaceus_europaeus
ENSSDUG00000012078	rabl3	100	94.850	ENSELUG00000014758	rabl3	100	94.850	Esox_lucius
ENSSDUG00000012078	rabl3	100	87.712	ENSFCAG00000031879	RABL3	100	83.962	Felis_catus
ENSSDUG00000012078	rabl3	100	85.169	ENSFALG00000005296	RABL3	100	85.169	Ficedula_albicollis
ENSSDUG00000012078	rabl3	100	86.809	ENSFDAG00000000307	RABL3	100	86.809	Fukomys_damarensis
ENSSDUG00000012078	rabl3	100	94.421	ENSFHEG00000011273	rabl3	100	94.421	Fundulus_heteroclitus
ENSSDUG00000012078	rabl3	100	95.279	ENSGMOG00000007845	rabl3	100	95.279	Gadus_morhua
ENSSDUG00000012078	rabl3	100	86.441	ENSGALG00000014949	RABL3	100	86.441	Gallus_gallus
ENSSDUG00000012078	rabl3	100	93.133	ENSGAFG00000015953	rabl3	100	93.133	Gambusia_affinis
ENSSDUG00000012078	rabl3	100	95.279	ENSGACG00000007387	rabl3	100	96.899	Gasterosteus_aculeatus
ENSSDUG00000012078	rabl3	100	87.712	ENSGAGG00000003677	RABL3	100	87.712	Gopherus_agassizii
ENSSDUG00000012078	rabl3	100	86.017	ENSGGOG00000006059	RABL3	100	86.017	Gorilla_gorilla
ENSSDUG00000012078	rabl3	100	98.283	ENSHBUG00000019478	rabl3	93	98.283	Haplochromis_burtoni
ENSSDUG00000012078	rabl3	100	86.809	ENSHGLG00000014491	RABL3	100	86.809	Heterocephalus_glaber_female
ENSSDUG00000012078	rabl3	100	86.809	ENSHGLG00100004866	RABL3	100	86.809	Heterocephalus_glaber_male
ENSSDUG00000012078	rabl3	100	95.122	ENSHCOG00000019245	rabl3	100	95.122	Hippocampus_comes
ENSSDUG00000012078	rabl3	100	93.133	ENSIPUG00000012657	rabl3	100	93.133	Ictalurus_punctatus
ENSSDUG00000012078	rabl3	100	86.017	ENSSTOG00000019452	RABL3	100	86.017	Ictidomys_tridecemlineatus
ENSSDUG00000012078	rabl3	100	82.547	ENSJJAG00000023553	Rabl3	100	82.547	Jaculus_jaculus
ENSSDUG00000012078	rabl3	100	91.845	ENSKMAG00000015464	rabl3	100	91.845	Kryptolebias_marmoratus
ENSSDUG00000012078	rabl3	100	97.863	ENSLBEG00000020595	rabl3	100	97.863	Labrus_bergylta
ENSSDUG00000012078	rabl3	100	97.863	ENSLBEG00000010627	-	100	97.863	Labrus_bergylta
ENSSDUG00000012078	rabl3	100	89.407	ENSLOCG00000006265	rabl3	100	89.407	Lepisosteus_oculatus
ENSSDUG00000012078	rabl3	100	87.288	ENSLAFG00000003711	RABL3	100	87.288	Loxodonta_africana
ENSSDUG00000012078	rabl3	100	86.441	ENSMFAG00000031923	RABL3	100	86.441	Macaca_fascicularis
ENSSDUG00000012078	rabl3	100	82.547	ENSMMUG00000001594	RABL3	100	82.547	Macaca_mulatta
ENSSDUG00000012078	rabl3	100	86.441	ENSMNEG00000043980	RABL3	100	86.441	Macaca_nemestrina
ENSSDUG00000012078	rabl3	100	86.441	ENSMLEG00000028177	RABL3	100	86.441	Mandrillus_leucophaeus
ENSSDUG00000012078	rabl3	100	97.854	ENSMAMG00000015155	rabl3	100	97.854	Mastacembelus_armatus
ENSSDUG00000012078	rabl3	100	97.854	ENSMZEG00005002607	rabl3	100	97.854	Maylandia_zebra
ENSSDUG00000012078	rabl3	100	83.898	ENSMAUG00000013022	Rabl3	100	83.898	Mesocricetus_auratus
ENSSDUG00000012078	rabl3	100	87.288	ENSMICG00000049288	RABL3	100	87.288	Microcebus_murinus
ENSSDUG00000012078	rabl3	100	83.475	ENSMOCG00000015237	Rabl3	100	83.475	Microtus_ochrogaster
ENSSDUG00000012078	rabl3	100	94.043	ENSMMOG00000005628	rabl3	100	94.043	Mola_mola
ENSSDUG00000012078	rabl3	100	86.864	ENSMODG00000018232	RABL3	100	86.864	Monodelphis_domestica
ENSSDUG00000012078	rabl3	100	90.678	ENSMALG00000018837	rabl3	100	90.678	Monopterus_albus
ENSSDUG00000012078	rabl3	100	83.898	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSSDUG00000012078	rabl3	100	83.898	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSSDUG00000012078	rabl3	100	83.475	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSSDUG00000012078	rabl3	100	83.898	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSSDUG00000012078	rabl3	100	87.712	ENSMPUG00000008257	RABL3	89	87.712	Mustela_putorius_furo
ENSSDUG00000012078	rabl3	100	86.864	ENSMLUG00000014113	RABL3	100	86.864	Myotis_lucifugus
ENSSDUG00000012078	rabl3	99	82.524	ENSNGAG00000001939	Rabl3	99	82.524	Nannospalax_galili
ENSSDUG00000012078	rabl3	93	97.696	ENSNBRG00000012423	rabl3	92	97.696	Neolamprologus_brichardi
ENSSDUG00000012078	rabl3	100	86.017	ENSNLEG00000031723	RABL3	100	86.017	Nomascus_leucogenys
ENSSDUG00000012078	rabl3	100	85.169	ENSMEUG00000006606	RABL3	100	85.169	Notamacropus_eugenii
ENSSDUG00000012078	rabl3	100	86.017	ENSODEG00000004758	-	100	86.017	Octodon_degus
ENSSDUG00000012078	rabl3	100	98.712	ENSONIG00000004281	rabl3	100	98.712	Oreochromis_niloticus
ENSSDUG00000012078	rabl3	99	85.470	ENSOANG00000003928	RABL3	99	85.470	Ornithorhynchus_anatinus
ENSSDUG00000012078	rabl3	100	95.279	ENSORLG00000020457	rabl3	100	95.279	Oryzias_latipes
ENSSDUG00000012078	rabl3	100	95.279	ENSORLG00020008991	rabl3	100	90.558	Oryzias_latipes_hni
ENSSDUG00000012078	rabl3	100	95.279	ENSORLG00015005649	rabl3	88	95.279	Oryzias_latipes_hsok
ENSSDUG00000012078	rabl3	100	96.137	ENSOMEG00000015066	rabl3	100	96.137	Oryzias_melastigma
ENSSDUG00000012078	rabl3	100	86.441	ENSOGAG00000005961	RABL3	100	86.441	Otolemur_garnettii
ENSSDUG00000012078	rabl3	100	88.559	ENSOARG00000019939	RABL3	100	88.559	Ovis_aries
ENSSDUG00000012078	rabl3	94	84.685	ENSPPAG00000036997	RABL3	87	84.685	Pan_paniscus
ENSSDUG00000012078	rabl3	100	87.712	ENSPPRG00000016325	RABL3	100	87.712	Panthera_pardus
ENSSDUG00000012078	rabl3	100	87.712	ENSPTIG00000018021	RABL3	100	87.712	Panthera_tigris_altaica
ENSSDUG00000012078	rabl3	100	86.017	ENSPTRG00000015272	RABL3	100	86.017	Pan_troglodytes
ENSSDUG00000012078	rabl3	100	86.441	ENSPANG00000001339	RABL3	100	86.441	Papio_anubis
ENSSDUG00000012078	rabl3	100	93.991	ENSPKIG00000007818	rabl3	100	93.991	Paramormyrops_kingsleyae
ENSSDUG00000012078	rabl3	100	86.864	ENSPSIG00000011358	RABL3	100	86.864	Pelodiscus_sinensis
ENSSDUG00000012078	rabl3	100	90.987	ENSPMGG00000015794	rabl3	100	90.987	Periophthalmus_magnuspinnatus
ENSSDUG00000012078	rabl3	100	83.898	ENSPEMG00000016913	Rabl3	100	83.898	Peromyscus_maniculatus_bairdii
ENSSDUG00000012078	rabl3	100	86.017	ENSPCIG00000018922	RABL3	100	86.017	Phascolarctos_cinereus
ENSSDUG00000012078	rabl3	100	95.708	ENSPFOG00000008586	rabl3	100	95.708	Poecilia_formosa
ENSSDUG00000012078	rabl3	100	95.708	ENSPLAG00000014482	rabl3	100	95.708	Poecilia_latipinna
ENSSDUG00000012078	rabl3	100	95.708	ENSPMEG00000002295	rabl3	100	95.708	Poecilia_mexicana
ENSSDUG00000012078	rabl3	100	95.708	ENSPREG00000014815	rabl3	100	95.708	Poecilia_reticulata
ENSSDUG00000012078	rabl3	100	86.441	ENSPPYG00000013501	RABL3	100	86.441	Pongo_abelii
ENSSDUG00000012078	rabl3	100	87.712	ENSPCOG00000022230	RABL3	100	87.712	Propithecus_coquereli
ENSSDUG00000012078	rabl3	100	86.017	ENSPVAG00000010013	RABL3	100	86.017	Pteropus_vampyrus
ENSSDUG00000012078	rabl3	100	98.283	ENSPNYG00000006659	rabl3	100	98.283	Pundamilia_nyererei
ENSSDUG00000012078	rabl3	100	96.996	ENSPNAG00000000748	rabl3	100	96.996	Pygocentrus_nattereri
ENSSDUG00000012078	rabl3	100	83.475	ENSRNOG00000026085	Rabl3	100	83.475	Rattus_norvegicus
ENSSDUG00000012078	rabl3	100	86.441	ENSRBIG00000040941	RABL3	100	86.441	Rhinopithecus_bieti
ENSSDUG00000012078	rabl3	100	86.441	ENSRROG00000043745	RABL3	100	86.441	Rhinopithecus_roxellana
ENSSDUG00000012078	rabl3	100	88.136	ENSSBOG00000004022	RABL3	100	88.136	Saimiri_boliviensis_boliviensis
ENSSDUG00000012078	rabl3	100	85.169	ENSSHAG00000012233	RABL3	100	85.169	Sarcophilus_harrisii
ENSSDUG00000012078	rabl3	100	94.850	ENSSFOG00015010171	rabl3	100	94.850	Scleropages_formosus
ENSSDUG00000012078	rabl3	100	98.291	ENSSMAG00000002403	rabl3	100	98.291	Scophthalmus_maximus
ENSSDUG00000012078	rabl3	100	99.571	ENSSLDG00000021899	rabl3	100	99.571	Seriola_lalandi_dorsalis
ENSSDUG00000012078	rabl3	100	87.288	ENSSARG00000008316	RABL3	100	87.288	Sorex_araneus
ENSSDUG00000012078	rabl3	100	86.864	ENSSPUG00000017490	RABL3	100	86.864	Sphenodon_punctatus
ENSSDUG00000012078	rabl3	100	98.712	ENSSPAG00000011642	rabl3	100	98.712	Stegastes_partitus
ENSSDUG00000012078	rabl3	100	88.136	ENSSSCG00000035258	RABL3	100	88.136	Sus_scrofa
ENSSDUG00000012078	rabl3	100	85.593	ENSTGUG00000013374	RABL3	100	85.593	Taeniopygia_guttata
ENSSDUG00000012078	rabl3	87	96.629	ENSTRUG00000007846	RABL3	100	97.656	Takifugu_rubripes
ENSSDUG00000012078	rabl3	100	74.153	ENSTBEG00000005153	RABL3	100	74.153	Tupaia_belangeri
ENSSDUG00000012078	rabl3	100	86.864	ENSUAMG00000005299	RABL3	100	86.864	Ursus_americanus
ENSSDUG00000012078	rabl3	100	86.441	ENSUMAG00000025256	RABL3	89	86.441	Ursus_maritimus
ENSSDUG00000012078	rabl3	100	88.136	ENSVPAG00000003776	RABL3	100	88.136	Vicugna_pacos
ENSSDUG00000012078	rabl3	100	87.712	ENSVVUG00000022300	RABL3	89	87.712	Vulpes_vulpes
ENSSDUG00000012078	rabl3	100	94.421	ENSXMAG00000003244	rabl3	100	94.421	Xiphophorus_maculatus