EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSDUG00000012179 (Gene tree)
Gene ID
111222101
Gene Symbol
thumpd3
Alias
cb255|sb:cb255|zgc:163086
Full Name
THUMP domain containing 3
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
23949 bases
Position
chrBDQW01000089.1:640755-664703
Accession
111222101
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000016745THUMPPF02926.172.4e-1011
ENSSDUP00000016690THUMPPF02926.172.5e-1011
ENSSDUP00000016716THUMPPF02926.172.5e-1011
ENSSDUP00000016745UPF0020PF01170.189.2e-4111
ENSSDUP00000016690UPF0020PF01170.189.8e-4111
ENSSDUP00000016716UPF0020PF01170.189.8e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000017022-2501-ENSSDUP00000016716490 (aa)-UPI000BBE1925
ENSSDUT00000017051-1434-ENSSDUP00000016745477 (aa)--
ENSSDUT00000016996-2501XM_022745670ENSSDUP00000016690490 (aa)XP_022601391UPI000BBE1925
Gene Model
Click here to download ENSSDUG00000012179's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012179's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000012179thumpd39656.701ENSG00000134077THUMPD39456.701Homo_sapiens
ENSSDUG00000012179thumpd39688.478ENSAPOG00000015836thumpd39986.279Acanthochromis_polyacanthus
ENSSDUG00000012179thumpd37530.311ENSAMEG00000008664THUMPD27930.311Ailuropoda_melanoleuca
ENSSDUG00000012179thumpd39458.246ENSAMEG00000011321THUMPD39458.246Ailuropoda_melanoleuca
ENSSDUG00000012179thumpd39987.342ENSACIG00000020096thumpd39985.051Amphilophus_citrinellus
ENSSDUG00000012179thumpd39986.809ENSAOCG00000004399thumpd310084.073Amphiprion_ocellaris
ENSSDUG00000012179thumpd39887.554ENSAPEG00000016740thumpd310084.879Amphiprion_percula
ENSSDUG00000012179thumpd310086.820ENSATEG00000005345thumpd310084.476Anabas_testudineus
ENSSDUG00000012179thumpd37963.038ENSAPLG00000003598THUMPD39963.520Anas_platyrhynchos
ENSSDUG00000012179thumpd39357.980ENSACAG00000014974THUMPD39558.586Anolis_carolinensis
ENSSDUG00000012179thumpd39656.907ENSANAG00000002365THUMPD39556.907Aotus_nancymaae
ENSSDUG00000012179thumpd38957.746ENSACLG00000013504-8957.746Astatotilapia_calliptera
ENSSDUG00000012179thumpd39987.158ENSACLG00000023333thumpd310084.677Astatotilapia_calliptera
ENSSDUG00000012179thumpd39671.734ENSAMXG00000015683thumpd39871.734Astyanax_mexicanus
ENSSDUG00000012179thumpd38130.542ENSBTAG00000004722THUMPD27830.542Bos_taurus
ENSSDUG00000012179thumpd39362.174ENSBTAG00000003112THUMPD39460.417Bos_taurus
ENSSDUG00000012179thumpd39135.240WBGene00010846M04B2.29935.469Caenorhabditis_elegans
ENSSDUG00000012179thumpd39756.432ENSCJAG00000015949THUMPD39556.432Callithrix_jacchus
ENSSDUG00000012179thumpd39160.738ENSCAFG00000005499THUMPD39060.738Canis_familiaris
ENSSDUG00000012179thumpd38130.073ENSCAFG00000006471THUMPD27730.123Canis_familiaris
ENSSDUG00000012179thumpd37659.536ENSCAFG00000008060-9359.536Canis_familiaris
ENSSDUG00000012179thumpd38160.533ENSCAFG00020025887-9460.533Canis_lupus_dingo
ENSSDUG00000012179thumpd37530.607ENSCAFG00020021695THUMPD27730.607Canis_lupus_dingo
ENSSDUG00000012179thumpd39160.738ENSCAFG00020008895-9060.738Canis_lupus_dingo
ENSSDUG00000012179thumpd39460.543ENSCHIG00000024037THUMPD39360.543Capra_hircus
ENSSDUG00000012179thumpd39656.757ENSTSYG00000000159THUMPD39556.757Carlito_syrichta
ENSSDUG00000012179thumpd38840.515ENSCAPG00000017486THUMPD38540.136Cavia_aperea
ENSSDUG00000012179thumpd39458.936ENSCPOG00000033287THUMPD39258.936Cavia_porcellus
ENSSDUG00000012179thumpd39651.452ENSCCAG00000021429-9551.452Cebus_capucinus
ENSSDUG00000012179thumpd39656.082ENSCCAG00000027067-9556.701Cebus_capucinus
ENSSDUG00000012179thumpd39557.083ENSCATG00000040999THUMPD39557.083Cercocebus_atys
ENSSDUG00000012179thumpd39259.740ENSCLAG00000000690THUMPD39159.740Chinchilla_lanigera
ENSSDUG00000012179thumpd39557.083ENSCSAG00000010753THUMPD39557.083Chlorocebus_sabaeus
ENSSDUG00000012179thumpd38049.593ENSCHOG00000012851THUMPD37649.593Choloepus_hoffmanni
ENSSDUG00000012179thumpd39260.297ENSCPBG00000014771THUMPD39560.000Chrysemys_picta_bellii
ENSSDUG00000012179thumpd39140.503ENSCSAVG00000008668-9740.503Ciona_savignyi
ENSSDUG00000012179thumpd39556.458ENSCANG00000031901THUMPD39556.458Colobus_angolensis_palliatus
ENSSDUG00000012179thumpd39160.832ENSCGRG00001024117Thumpd39060.832Cricetulus_griseus_chok1gshd
ENSSDUG00000012179thumpd39160.832ENSCGRG00000018116Thumpd39060.832Cricetulus_griseus_crigri
ENSSDUG00000012179thumpd39780.810ENSCSEG00000002546thumpd39979.022Cynoglossus_semilaevis
ENSSDUG00000012179thumpd39882.013ENSCVAG00000001019thumpd39978.831Cyprinodon_variegatus
ENSSDUG00000012179thumpd39766.030ENSDARG00000059634thumpd39966.030Danio_rerio
ENSSDUG00000012179thumpd39258.261ENSDNOG00000047668THUMPD38959.783Dasypus_novemcinctus
ENSSDUG00000012179thumpd39457.717ENSDORG00000003257Thumpd39359.657Dipodomys_ordii
ENSSDUG00000012179thumpd36053.094ENSETEG00000020239-6055.049Echinops_telfairi
ENSSDUG00000012179thumpd39050.450ENSEBUG00000004221thumpd39750.676Eptatretus_burgeri
ENSSDUG00000012179thumpd39457.233ENSEASG00005013327THUMPD39357.233Equus_asinus_asinus
ENSSDUG00000012179thumpd39459.329ENSECAG00000002016THUMPD39259.746Equus_caballus
ENSSDUG00000012179thumpd39254.684ENSEEUG00000014696THUMPD39154.684Erinaceus_europaeus
ENSSDUG00000012179thumpd39384.247ENSELUG00000018246thumpd39764.706Esox_lucius
ENSSDUG00000012179thumpd39160.217ENSFCAG00000006171THUMPD39060.217Felis_catus
ENSSDUG00000012179thumpd38656.306ENSFALG00000013631THUMPD39157.991Ficedula_albicollis
ENSSDUG00000012179thumpd39459.149ENSFDAG00000014825THUMPD39259.149Fukomys_damarensis
ENSSDUG00000012179thumpd39984.100ENSFHEG00000006006thumpd39982.495Fundulus_heteroclitus
ENSSDUG00000012179thumpd39970.231ENSGMOG00000007923thumpd39670.440Gadus_morhua
ENSSDUG00000012179thumpd39257.495ENSGALG00000044813THUMPD39757.906Gallus_gallus
ENSSDUG00000012179thumpd39983.857ENSGAFG00000021645thumpd39982.129Gambusia_affinis
ENSSDUG00000012179thumpd39883.691ENSGACG00000000930thumpd39983.691Gasterosteus_aculeatus
ENSSDUG00000012179thumpd39260.085ENSGAGG00000022750THUMPD39560.288Gopherus_agassizii
ENSSDUG00000012179thumpd39657.054ENSGGOG00000000604THUMPD39457.054Gorilla_gorilla
ENSSDUG00000012179thumpd39987.158ENSHBUG00000013405thumpd310084.677Haplochromis_burtoni
ENSSDUG00000012179thumpd39458.209ENSHGLG00000016200THUMPD39258.849Heterocephalus_glaber_female
ENSSDUG00000012179thumpd39051.893ENSHGLG00100000505-9252.116Heterocephalus_glaber_male
ENSSDUG00000012179thumpd39458.085ENSHGLG00100017321-9258.723Heterocephalus_glaber_male
ENSSDUG00000012179thumpd39780.519ENSHCOG00000004871thumpd39978.782Hippocampus_comes
ENSSDUG00000012179thumpd39570.716ENSIPUG00000019415THUMPD39470.716Ictalurus_punctatus
ENSSDUG00000012179thumpd39459.408ENSSTOG00000003973THUMPD39260.043Ictidomys_tridecemlineatus
ENSSDUG00000012179thumpd37530.769ENSJJAG00000020374Thumpd27730.769Jaculus_jaculus
ENSSDUG00000012179thumpd39651.368ENSJJAG00000017751Thumpd39252.431Jaculus_jaculus
ENSSDUG00000012179thumpd39982.947ENSKMAG00000021025thumpd39481.010Kryptolebias_marmoratus
ENSSDUG00000012179thumpd39986.412ENSLBEG00000012252thumpd39984.444Labrus_bergylta
ENSSDUG00000012179thumpd39162.039ENSLACG00000018604THUMPD39062.473Latimeria_chalumnae
ENSSDUG00000012179thumpd39761.079ENSLOCG00000009800thumpd39863.211Lepisosteus_oculatus
ENSSDUG00000012179thumpd39460.043ENSLAFG00000005103THUMPD39260.043Loxodonta_africana
ENSSDUG00000012179thumpd39457.474ENSMFAG00000044884THUMPD39457.474Macaca_fascicularis
ENSSDUG00000012179thumpd39457.474ENSMMUG00000017307THUMPD39457.474Macaca_mulatta
ENSSDUG00000012179thumpd39457.474ENSMNEG00000030529THUMPD39457.474Macaca_nemestrina
ENSSDUG00000012179thumpd39557.083ENSMLEG00000032943THUMPD39557.083Mandrillus_leucophaeus
ENSSDUG00000012179thumpd39884.648ENSMAMG00000023934thumpd310082.892Mastacembelus_armatus
ENSSDUG00000012179thumpd39987.158ENSMZEG00005010623thumpd310084.677Maylandia_zebra
ENSSDUG00000012179thumpd38161.654ENSMGAG00000010182THUMPD310061.654Meleagris_gallopavo
ENSSDUG00000012179thumpd39160.699ENSMAUG00000012250Thumpd39060.699Mesocricetus_auratus
ENSSDUG00000012179thumpd39355.301ENSMICG00000010095THUMPD39155.301Microcebus_murinus
ENSSDUG00000012179thumpd39160.793ENSMOCG00000020148Thumpd39060.793Microtus_ochrogaster
ENSSDUG00000012179thumpd39983.617ENSMMOG00000021791thumpd39983.617Mola_mola
ENSSDUG00000012179thumpd39158.315ENSMODG00000004715-9158.315Monodelphis_domestica
ENSSDUG00000012179thumpd39485.938ENSMALG00000017316thumpd39984.648Monopterus_albus
ENSSDUG00000012179thumpd35553.957MGP_CAROLIEiJ_G0028714-5854.643Mus_caroli
ENSSDUG00000012179thumpd39459.140ENSMUSG00000030264Thumpd39259.140Mus_musculus
ENSSDUG00000012179thumpd39459.570MGP_PahariEiJ_G0022465Thumpd39259.570Mus_pahari
ENSSDUG00000012179thumpd39459.570MGP_SPRETEiJ_G0029742Thumpd39259.570Mus_spretus
ENSSDUG00000012179thumpd39557.350ENSMPUG00000017066-9457.350Mustela_putorius_furo
ENSSDUG00000012179thumpd39551.667ENSMPUG00000005219-9451.667Mustela_putorius_furo
ENSSDUG00000012179thumpd39755.215ENSMLUG00000008538THUMPD39455.624Myotis_lucifugus
ENSSDUG00000012179thumpd39558.439ENSNGAG00000021014-9558.193Nannospalax_galili
ENSSDUG00000012179thumpd39149.441ENSNGAG00000001549-8950.112Nannospalax_galili
ENSSDUG00000012179thumpd39987.342ENSNBRG00000004886thumpd310084.879Neolamprologus_brichardi
ENSSDUG00000012179thumpd39656.495ENSNLEG00000003863THUMPD39556.701Nomascus_leucogenys
ENSSDUG00000012179thumpd38557.783ENSMEUG00000009819THUMPD310057.783Notamacropus_eugenii
ENSSDUG00000012179thumpd38260.341ENSOPRG00000002020THUMPD39860.341Ochotona_princeps
ENSSDUG00000012179thumpd37155.866ENSODEG00000018242THUMPD310055.866Octodon_degus
ENSSDUG00000012179thumpd39887.983ENSONIG00000018977thumpd310085.081Oreochromis_niloticus
ENSSDUG00000012179thumpd38255.422ENSOANG00000014481THUMPD39756.386Ornithorhynchus_anatinus
ENSSDUG00000012179thumpd39459.062ENSOCUG00000010921THUMPD39259.062Oryctolagus_cuniculus
ENSSDUG00000012179thumpd39880.128ENSORLG00000000676thumpd39978.850Oryzias_latipes
ENSSDUG00000012179thumpd35031.950ENSORLG00020018792thumpd25432.365Oryzias_latipes_hni
ENSSDUG00000012179thumpd39980.085ENSORLG00020007509thumpd39979.466Oryzias_latipes_hni
ENSSDUG00000012179thumpd39880.769ENSORLG00015003615thumpd39979.466Oryzias_latipes_hsok
ENSSDUG00000012179thumpd39976.386ENSOMEG00000014115thumpd39977.459Oryzias_melastigma
ENSSDUG00000012179thumpd38158.621ENSOGAG00000017111THUMPD39958.621Otolemur_garnettii
ENSSDUG00000012179thumpd39460.543ENSOARG00000007139THUMPD39160.543Ovis_aries
ENSSDUG00000012179thumpd39656.495ENSPPAG00000025852THUMPD39456.701Pan_paniscus
ENSSDUG00000012179thumpd39358.787ENSPPRG00000008071THUMPD39258.787Panthera_pardus
ENSSDUG00000012179thumpd38130.340ENSPPRG00000003874THUMPD27831.311Panthera_pardus
ENSSDUG00000012179thumpd39359.197ENSPTIG00000017923THUMPD39259.197Panthera_tigris_altaica
ENSSDUG00000012179thumpd37531.250ENSPTIG00000004118THUMPD27632.292Panthera_tigris_altaica
ENSSDUG00000012179thumpd39656.495ENSPTRG00000014585THUMPD39456.495Pan_troglodytes
ENSSDUG00000012179thumpd39557.292ENSPANG00000016253THUMPD39457.292Papio_anubis
ENSSDUG00000012179thumpd39665.828ENSPKIG00000014009thumpd39765.828Paramormyrops_kingsleyae
ENSSDUG00000012179thumpd39157.962ENSPSIG00000007370THUMPD39558.163Pelodiscus_sinensis
ENSSDUG00000012179thumpd39977.004ENSPMGG00000017563thumpd39977.004Periophthalmus_magnuspinnatus
ENSSDUG00000012179thumpd39160.927ENSPEMG00000022411Thumpd39060.927Peromyscus_maniculatus_bairdii
ENSSDUG00000012179thumpd39152.889ENSPMAG00000001291thumpd39954.667Petromyzon_marinus
ENSSDUG00000012179thumpd39256.871ENSPCIG00000002049THUMPD39456.008Phascolarctos_cinereus
ENSSDUG00000012179thumpd39984.211ENSPFOG00000002318thumpd39981.891Poecilia_formosa
ENSSDUG00000012179thumpd39984.211ENSPLAG00000014804thumpd39981.891Poecilia_latipinna
ENSSDUG00000012179thumpd39984.211ENSPMEG00000000582thumpd39981.891Poecilia_mexicana
ENSSDUG00000012179thumpd39984.100ENSPREG00000009176thumpd39982.000Poecilia_reticulata
ENSSDUG00000012179thumpd39043.779ENSPPYG00000017616-8943.779Pongo_abelii
ENSSDUG00000012179thumpd39656.289ENSPPYG00000029461THUMPD39556.495Pongo_abelii
ENSSDUG00000012179thumpd38459.330ENSPCAG00000015398THUMPD39959.330Procavia_capensis
ENSSDUG00000012179thumpd39649.686ENSPCOG00000018095-9451.153Propithecus_coquereli
ENSSDUG00000012179thumpd38353.095ENSPCOG00000023618-9453.333Propithecus_coquereli
ENSSDUG00000012179thumpd39459.119ENSPVAG00000008721THUMPD39359.119Pteropus_vampyrus
ENSSDUG00000012179thumpd39987.158ENSPNYG00000006918thumpd310084.677Pundamilia_nyererei
ENSSDUG00000012179thumpd39670.753ENSPNAG00000014936thumpd39670.753Pygocentrus_nattereri
ENSSDUG00000012179thumpd39160.793ENSRNOG00000006941Thumpd39060.793Rattus_norvegicus
ENSSDUG00000012179thumpd39657.173ENSRBIG00000035954THUMPD39557.173Rhinopithecus_bieti
ENSSDUG00000012179thumpd39656.965ENSRROG00000035734THUMPD39556.965Rhinopithecus_roxellana
ENSSDUG00000012179thumpd37530.026ENSRROG00000031707THUMPD27730.026Rhinopithecus_roxellana
ENSSDUG00000012179thumpd39655.992ENSSBOG00000023567THUMPD39556.612Saimiri_boliviensis_boliviensis
ENSSDUG00000012179thumpd39558.910ENSSHAG00000014467THUMPD39358.910Sarcophilus_harrisii
ENSSDUG00000012179thumpd39471.335ENSSFOG00015019210thumpd39271.335Scleropages_formosus
ENSSDUG00000012179thumpd39986.792ENSSMAG00000000609thumpd39787.312Scophthalmus_maximus
ENSSDUG00000012179thumpd310098.571ENSSLDG00000022028thumpd310098.571Seriola_lalandi_dorsalis
ENSSDUG00000012179thumpd37867.532ENSSARG00000002239THUMPD37767.532Sorex_araneus
ENSSDUG00000012179thumpd39159.488ENSSPUG00000017461THUMPD39358.947Sphenodon_punctatus
ENSSDUG00000012179thumpd39986.258ENSSPAG00000008345thumpd39884.008Stegastes_partitus
ENSSDUG00000012179thumpd39459.746ENSSSCG00000011542THUMPD39459.746Sus_scrofa
ENSSDUG00000012179thumpd39061.161ENSTGUG00000010440THUMPD310061.161Taeniopygia_guttata
ENSSDUG00000012179thumpd39874.518ENSTRUG00000004420thumpd39973.486Takifugu_rubripes
ENSSDUG00000012179thumpd39780.000ENSTNIG00000014627thumpd310080.000Tetraodon_nigroviridis
ENSSDUG00000012179thumpd39654.979ENSTBEG00000003450THUMPD39455.021Tupaia_belangeri
ENSSDUG00000012179thumpd39260.784ENSTTRG00000009694THUMPD39161.002Tursiops_truncatus
ENSSDUG00000012179thumpd39458.004ENSUAMG00000009412THUMPD39358.714Ursus_americanus
ENSSDUG00000012179thumpd37530.469ENSUMAG00000013316THUMPD27730.000Ursus_maritimus
ENSSDUG00000012179thumpd39460.390ENSUMAG00000019241THUMPD39360.521Ursus_maritimus
ENSSDUG00000012179thumpd37658.005ENSVPAG00000002855THUMPD39158.005Vicugna_pacos
ENSSDUG00000012179thumpd39160.304ENSVVUG00000025278THUMPD39060.304Vulpes_vulpes
ENSSDUG00000012179thumpd37530.607ENSVVUG00000018628THUMPD27730.607Vulpes_vulpes
ENSSDUG00000012179thumpd39358.458ENSXETG00000001447thumpd39158.458Xenopus_tropicalis
ENSSDUG00000012179thumpd39983.755ENSXCOG00000000159thumpd39984.110Xiphophorus_couchianus
ENSSDUG00000012179thumpd39983.824ENSXMAG00000001423thumpd39981.764Xiphophorus_maculatus

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