EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000012334 (Gene tree)
Gene ID: 111238354
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8125 bases
Position: chrBDQW01000025.1:10690506-10698630
Accession: 111238354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016980	DEAD	PF00270.29	1.1e-73	1	1
ENSSDUP00000017021	DEAD	PF00270.29	1.8e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017287	-	2823	XM_022767815	ENSSDUP00000016980	740 (aa)	XP_022623536	UPI000BBE27D8
ENSSDUT00000017328	-	1980	-	ENSSDUP00000017021	659 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000012334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000012334	ddx1	58	43.333	ENSSDUG00000007530	-	69	43.333
ENSSDUG00000012334	ddx1	57	32.787	ENSSDUG00000003257	ddx28	64	32.787
ENSSDUG00000012334	ddx1	57	45.098	ENSSDUG00000019695	ddx6	70	45.098
ENSSDUG00000012334	ddx1	58	43.333	ENSSDUG00000009713	ddx61	69	43.333
ENSSDUG00000012334	ddx1	55	50.909	ENSSDUG00000018110	ddx47	54	50.909
ENSSDUG00000012334	ddx1	55	43.077	ENSSDUG00000023568	ddx55	62	43.077
ENSSDUG00000012334	ddx1	53	33.871	ENSSDUG00000022015	ddx4	54	33.871

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012334	ddx1	100	84.459	ENSG00000079785	DDX1	100	84.459	Homo_sapiens
ENSSDUG00000012334	ddx1	100	92.703	ENSAPOG00000003166	ddx1	100	92.779	Acanthochromis_polyacanthus
ENSSDUG00000012334	ddx1	99	84.168	ENSAMEG00000001071	DDX1	99	84.168	Ailuropoda_melanoleuca
ENSSDUG00000012334	ddx1	100	91.958	ENSACIG00000017422	ddx1	100	92.564	Amphilophus_citrinellus
ENSSDUG00000012334	ddx1	87	93.206	ENSAOCG00000015436	ddx1	94	93.711	Amphiprion_ocellaris
ENSSDUG00000012334	ddx1	100	93.649	ENSAPEG00000007699	ddx1	100	93.733	Amphiprion_percula
ENSSDUG00000012334	ddx1	99	94.504	ENSATEG00000003965	ddx1	98	94.504	Anabas_testudineus
ENSSDUG00000012334	ddx1	100	84.946	ENSAPLG00000011093	DDX1	100	84.946	Anas_platyrhynchos
ENSSDUG00000012334	ddx1	94	85.673	ENSACAG00000011036	DDX1	99	85.673	Anolis_carolinensis
ENSSDUG00000012334	ddx1	100	84.730	ENSANAG00000037912	DDX1	100	84.730	Aotus_nancymaae
ENSSDUG00000012334	ddx1	100	93.171	ENSACLG00000008850	ddx1	100	93.171	Astatotilapia_calliptera
ENSSDUG00000012334	ddx1	100	90.000	ENSAMXG00000002100	ddx1	100	90.000	Astyanax_mexicanus
ENSSDUG00000012334	ddx1	100	85.135	ENSBTAG00000009906	DDX1	100	85.135	Bos_taurus
ENSSDUG00000012334	ddx1	98	47.083	WBGene00021938	Y55F3BR.1	98	47.083	Caenorhabditis_elegans
ENSSDUG00000012334	ddx1	100	85.000	ENSCJAG00000007076	DDX1	100	85.000	Callithrix_jacchus
ENSSDUG00000012334	ddx1	100	84.730	ENSCAFG00000003686	DDX1	100	84.730	Canis_familiaris
ENSSDUG00000012334	ddx1	100	84.730	ENSCAFG00020026083	DDX1	100	84.730	Canis_lupus_dingo
ENSSDUG00000012334	ddx1	100	85.000	ENSCHIG00000011046	DDX1	100	85.000	Capra_hircus
ENSSDUG00000012334	ddx1	100	63.514	ENSTSYG00000037396	-	98	63.514	Carlito_syrichta
ENSSDUG00000012334	ddx1	100	84.865	ENSTSYG00000002477	-	100	84.865	Carlito_syrichta
ENSSDUG00000012334	ddx1	97	68.740	ENSCAPG00000008906	-	93	68.740	Cavia_aperea
ENSSDUG00000012334	ddx1	98	82.848	ENSCPOG00000009816	-	96	82.848	Cavia_porcellus
ENSSDUG00000012334	ddx1	68	83.466	ENSCPOG00000032467	-	100	83.466	Cavia_porcellus
ENSSDUG00000012334	ddx1	100	84.730	ENSCCAG00000030085	DDX1	100	84.730	Cebus_capucinus
ENSSDUG00000012334	ddx1	100	84.324	ENSCATG00000033924	DDX1	100	84.324	Cercocebus_atys
ENSSDUG00000012334	ddx1	100	85.000	ENSCLAG00000005434	DDX1	100	85.000	Chinchilla_lanigera
ENSSDUG00000012334	ddx1	100	84.324	ENSCSAG00000007883	DDX1	100	84.324	Chlorocebus_sabaeus
ENSSDUG00000012334	ddx1	70	88.599	ENSCHOG00000002171	DDX1	70	88.599	Choloepus_hoffmanni
ENSSDUG00000012334	ddx1	99	79.348	ENSCPBG00000013330	DDX1	99	84.405	Chrysemys_picta_bellii
ENSSDUG00000012334	ddx1	100	65.684	ENSCING00000001176	-	100	65.688	Ciona_intestinalis
ENSSDUG00000012334	ddx1	98	62.225	ENSCSAVG00000003028	-	99	62.225	Ciona_savignyi
ENSSDUG00000012334	ddx1	100	84.324	ENSCANG00000031530	DDX1	100	84.324	Colobus_angolensis_palliatus
ENSSDUG00000012334	ddx1	100	84.189	ENSCGRG00001013025	Ddx1	100	84.189	Cricetulus_griseus_chok1gshd
ENSSDUG00000012334	ddx1	100	84.189	ENSCGRG00000000676	Ddx1	100	84.189	Cricetulus_griseus_crigri
ENSSDUG00000012334	ddx1	100	93.323	ENSCSEG00000002630	ddx1	100	93.323	Cynoglossus_semilaevis
ENSSDUG00000012334	ddx1	100	91.199	ENSCVAG00000020927	ddx1	100	91.417	Cyprinodon_variegatus
ENSSDUG00000012334	ddx1	100	88.243	ENSDARG00000032117	ddx1	100	88.420	Danio_rerio
ENSSDUG00000012334	ddx1	100	84.324	ENSDNOG00000006905	DDX1	100	84.324	Dasypus_novemcinctus
ENSSDUG00000012334	ddx1	100	84.459	ENSDORG00000012847	Ddx1	100	84.459	Dipodomys_ordii
ENSSDUG00000012334	ddx1	98	59.781	FBgn0015075	Ddx1	99	60.192	Drosophila_melanogaster
ENSSDUG00000012334	ddx1	99	78.560	ENSETEG00000014259	DDX1	100	76.216	Echinops_telfairi
ENSSDUG00000012334	ddx1	72	77.331	ENSEBUG00000009800	-	99	77.331	Eptatretus_burgeri
ENSSDUG00000012334	ddx1	100	84.730	ENSEASG00005009335	DDX1	92	84.730	Equus_asinus_asinus
ENSSDUG00000012334	ddx1	99	84.275	ENSECAG00000016396	DDX1	100	84.362	Equus_caballus
ENSSDUG00000012334	ddx1	88	83.585	ENSEEUG00000001606	DDX1	89	83.585	Erinaceus_europaeus
ENSSDUG00000012334	ddx1	100	87.719	ENSELUG00000006743	ddx1	100	87.755	Esox_lucius
ENSSDUG00000012334	ddx1	100	84.595	ENSFCAG00000004680	DDX1	100	84.595	Felis_catus
ENSSDUG00000012334	ddx1	100	85.541	ENSFALG00000008696	DDX1	100	85.541	Ficedula_albicollis
ENSSDUG00000012334	ddx1	100	84.324	ENSFDAG00000021305	DDX1	100	84.324	Fukomys_damarensis
ENSSDUG00000012334	ddx1	100	91.622	ENSFHEG00000008444	ddx1	100	91.689	Fundulus_heteroclitus
ENSSDUG00000012334	ddx1	100	87.079	ENSGMOG00000011300	ddx1	100	87.079	Gadus_morhua
ENSSDUG00000012334	ddx1	100	85.000	ENSGALG00000016461	DDX1	100	85.000	Gallus_gallus
ENSSDUG00000012334	ddx1	100	92.162	ENSGAFG00000004706	ddx1	100	92.162	Gambusia_affinis
ENSSDUG00000012334	ddx1	100	91.351	ENSGACG00000011162	ddx1	100	91.351	Gasterosteus_aculeatus
ENSSDUG00000012334	ddx1	100	85.135	ENSGAGG00000021020	DDX1	100	85.135	Gopherus_agassizii
ENSSDUG00000012334	ddx1	100	84.459	ENSGGOG00000012482	DDX1	100	84.459	Gorilla_gorilla
ENSSDUG00000012334	ddx1	100	93.378	ENSHBUG00000014069	ddx1	100	93.378	Haplochromis_burtoni
ENSSDUG00000012334	ddx1	100	84.324	ENSHGLG00000000801	DDX1	100	84.324	Heterocephalus_glaber_female
ENSSDUG00000012334	ddx1	99	84.332	ENSHGLG00100000711	DDX1	100	84.332	Heterocephalus_glaber_male
ENSSDUG00000012334	ddx1	100	92.027	ENSHCOG00000011492	ddx1	96	92.027	Hippocampus_comes
ENSSDUG00000012334	ddx1	100	88.649	ENSIPUG00000003494	ddx1	100	88.649	Ictalurus_punctatus
ENSSDUG00000012334	ddx1	99	84.469	ENSSTOG00000003977	DDX1	100	84.469	Ictidomys_tridecemlineatus
ENSSDUG00000012334	ddx1	99	80.000	ENSJJAG00000013315	Ddx1	100	80.000	Jaculus_jaculus
ENSSDUG00000012334	ddx1	100	93.784	ENSKMAG00000011340	ddx1	100	93.784	Kryptolebias_marmoratus
ENSSDUG00000012334	ddx1	100	88.636	ENSLBEG00000008692	ddx1	100	88.636	Labrus_bergylta
ENSSDUG00000012334	ddx1	100	83.919	ENSLACG00000010529	DDX1	100	83.919	Latimeria_chalumnae
ENSSDUG00000012334	ddx1	100	86.461	ENSLOCG00000016473	ddx1	100	86.461	Lepisosteus_oculatus
ENSSDUG00000012334	ddx1	99	85.617	ENSLAFG00000002213	DDX1	99	85.617	Loxodonta_africana
ENSSDUG00000012334	ddx1	100	84.324	ENSMFAG00000033987	DDX1	100	84.324	Macaca_fascicularis
ENSSDUG00000012334	ddx1	100	84.324	ENSMMUG00000023437	DDX1	100	84.324	Macaca_mulatta
ENSSDUG00000012334	ddx1	100	84.324	ENSMNEG00000029189	DDX1	100	84.324	Macaca_nemestrina
ENSSDUG00000012334	ddx1	100	84.324	ENSMLEG00000030787	DDX1	100	84.324	Mandrillus_leucophaeus
ENSSDUG00000012334	ddx1	100	94.459	ENSMAMG00000015916	ddx1	100	94.459	Mastacembelus_armatus
ENSSDUG00000012334	ddx1	100	93.171	ENSMZEG00005015207	ddx1	100	93.171	Maylandia_zebra
ENSSDUG00000012334	ddx1	99	81.030	ENSMGAG00000014025	DDX1	100	81.030	Meleagris_gallopavo
ENSSDUG00000012334	ddx1	64	92.727	ENSMAUG00000016156	Ddx1	100	92.727	Mesocricetus_auratus
ENSSDUG00000012334	ddx1	100	84.595	ENSMICG00000001023	DDX1	100	84.595	Microcebus_murinus
ENSSDUG00000012334	ddx1	100	84.189	ENSMOCG00000000257	Ddx1	100	84.189	Microtus_ochrogaster
ENSSDUG00000012334	ddx1	99	92.061	ENSMMOG00000015397	ddx1	99	92.061	Mola_mola
ENSSDUG00000012334	ddx1	99	85.617	ENSMODG00000010275	DDX1	99	85.617	Monodelphis_domestica
ENSSDUG00000012334	ddx1	100	93.784	ENSMALG00000016409	ddx1	100	93.784	Monopterus_albus
ENSSDUG00000012334	ddx1	100	84.324	MGP_CAROLIEiJ_G0017622	Ddx1	100	84.324	Mus_caroli
ENSSDUG00000012334	ddx1	100	84.459	ENSMUSG00000037149	Ddx1	100	84.459	Mus_musculus
ENSSDUG00000012334	ddx1	100	84.595	MGP_PahariEiJ_G0029378	Ddx1	100	84.595	Mus_pahari
ENSSDUG00000012334	ddx1	100	84.459	MGP_SPRETEiJ_G0018464	Ddx1	100	84.459	Mus_spretus
ENSSDUG00000012334	ddx1	100	84.459	ENSMPUG00000013606	DDX1	100	84.459	Mustela_putorius_furo
ENSSDUG00000012334	ddx1	99	84.511	ENSMLUG00000003027	DDX1	98	84.511	Myotis_lucifugus
ENSSDUG00000012334	ddx1	99	84.196	ENSNGAG00000015783	Ddx1	100	84.196	Nannospalax_galili
ENSSDUG00000012334	ddx1	88	90.051	ENSNBRG00000020677	ddx1	95	90.051	Neolamprologus_brichardi
ENSSDUG00000012334	ddx1	100	84.595	ENSNLEG00000014417	DDX1	100	84.595	Nomascus_leucogenys
ENSSDUG00000012334	ddx1	99	84.356	ENSMEUG00000008254	DDX1	99	83.721	Notamacropus_eugenii
ENSSDUG00000012334	ddx1	99	64.319	ENSOPRG00000004290	DDX1	100	60.405	Ochotona_princeps
ENSSDUG00000012334	ddx1	100	85.000	ENSODEG00000000569	DDX1	100	85.000	Octodon_degus
ENSSDUG00000012334	ddx1	100	94.197	ENSONIG00000000513	ddx1	100	94.197	Oreochromis_niloticus
ENSSDUG00000012334	ddx1	85	83.333	ENSOANG00000005450	DDX1	99	83.333	Ornithorhynchus_anatinus
ENSSDUG00000012334	ddx1	100	84.730	ENSOCUG00000007010	DDX1	100	84.730	Oryctolagus_cuniculus
ENSSDUG00000012334	ddx1	100	91.351	ENSORLG00000016709	ddx1	100	91.351	Oryzias_latipes
ENSSDUG00000012334	ddx1	99	91.281	ENSORLG00020003290	ddx1	100	91.281	Oryzias_latipes_hni
ENSSDUG00000012334	ddx1	100	90.946	ENSORLG00015022438	ddx1	100	91.008	Oryzias_latipes_hsok
ENSSDUG00000012334	ddx1	100	86.757	ENSOMEG00000017620	ddx1	100	86.757	Oryzias_melastigma
ENSSDUG00000012334	ddx1	99	84.511	ENSOGAG00000008730	DDX1	100	84.511	Otolemur_garnettii
ENSSDUG00000012334	ddx1	99	84.783	ENSOARG00000016369	DDX1	100	84.783	Ovis_aries
ENSSDUG00000012334	ddx1	100	84.324	ENSPPAG00000027432	DDX1	100	84.324	Pan_paniscus
ENSSDUG00000012334	ddx1	100	84.595	ENSPPRG00000020556	DDX1	100	84.595	Panthera_pardus
ENSSDUG00000012334	ddx1	100	84.459	ENSPTIG00000008267	DDX1	100	84.459	Panthera_tigris_altaica
ENSSDUG00000012334	ddx1	100	84.324	ENSPTRG00000011670	DDX1	100	84.324	Pan_troglodytes
ENSSDUG00000012334	ddx1	100	84.324	ENSPANG00000025185	DDX1	100	84.324	Papio_anubis
ENSSDUG00000012334	ddx1	100	86.216	ENSPKIG00000012466	ddx1	100	86.512	Paramormyrops_kingsleyae
ENSSDUG00000012334	ddx1	54	81.886	ENSPSIG00000012292	DDX1	100	81.886	Pelodiscus_sinensis
ENSSDUG00000012334	ddx1	100	90.405	ENSPMGG00000000782	ddx1	100	90.405	Periophthalmus_magnuspinnatus
ENSSDUG00000012334	ddx1	100	85.000	ENSPEMG00000016389	Ddx1	100	85.000	Peromyscus_maniculatus_bairdii
ENSSDUG00000012334	ddx1	99	78.397	ENSPMAG00000009118	-	100	78.397	Petromyzon_marinus
ENSSDUG00000012334	ddx1	100	86.486	ENSPCIG00000010941	DDX1	100	86.486	Phascolarctos_cinereus
ENSSDUG00000012334	ddx1	100	92.162	ENSPFOG00000011921	ddx1	100	92.162	Poecilia_formosa
ENSSDUG00000012334	ddx1	97	91.446	ENSPFOG00000006873	-	100	91.446	Poecilia_formosa
ENSSDUG00000012334	ddx1	100	92.027	ENSPLAG00000005939	ddx1	100	92.027	Poecilia_latipinna
ENSSDUG00000012334	ddx1	100	92.162	ENSPMEG00000011140	ddx1	100	92.162	Poecilia_mexicana
ENSSDUG00000012334	ddx1	100	92.432	ENSPREG00000011751	ddx1	100	92.432	Poecilia_reticulata
ENSSDUG00000012334	ddx1	100	84.459	ENSPPYG00000012638	DDX1	100	84.459	Pongo_abelii
ENSSDUG00000012334	ddx1	100	72.838	ENSPCAG00000001491	DDX1	100	72.838	Procavia_capensis
ENSSDUG00000012334	ddx1	99	82.745	ENSPCOG00000028185	DDX1	99	82.745	Propithecus_coquereli
ENSSDUG00000012334	ddx1	100	84.324	ENSPVAG00000013618	DDX1	100	84.324	Pteropus_vampyrus
ENSSDUG00000012334	ddx1	100	93.378	ENSPNYG00000013839	ddx1	100	93.544	Pundamilia_nyererei
ENSSDUG00000012334	ddx1	99	88.550	ENSPNAG00000017033	ddx1	97	88.550	Pygocentrus_nattereri
ENSSDUG00000012334	ddx1	100	84.595	ENSRNOG00000006652	Ddx1	100	84.595	Rattus_norvegicus
ENSSDUG00000012334	ddx1	100	83.378	ENSRBIG00000041664	DDX1	100	83.840	Rhinopithecus_bieti
ENSSDUG00000012334	ddx1	100	84.054	ENSRROG00000031167	DDX1	100	84.054	Rhinopithecus_roxellana
ENSSDUG00000012334	ddx1	100	84.865	ENSSBOG00000027577	DDX1	100	84.865	Saimiri_boliviensis_boliviensis
ENSSDUG00000012334	ddx1	99	81.346	ENSSHAG00000009363	DDX1	99	78.697	Sarcophilus_harrisii
ENSSDUG00000012334	ddx1	100	86.757	ENSSFOG00015014476	ddx1	100	86.757	Scleropages_formosus
ENSSDUG00000012334	ddx1	100	93.378	ENSSMAG00000010094	ddx1	100	93.378	Scophthalmus_maximus
ENSSDUG00000012334	ddx1	100	99.324	ENSSLDG00000025345	ddx1	100	99.324	Seriola_lalandi_dorsalis
ENSSDUG00000012334	ddx1	99	76.294	ENSSARG00000004536	DDX1	100	76.294	Sorex_araneus
ENSSDUG00000012334	ddx1	100	84.189	ENSSPUG00000018835	DDX1	100	84.189	Sphenodon_punctatus
ENSSDUG00000012334	ddx1	100	87.973	ENSSPAG00000023554	ddx1	100	87.973	Stegastes_partitus
ENSSDUG00000012334	ddx1	100	84.595	ENSSSCG00000008619	DDX1	100	84.595	Sus_scrofa
ENSSDUG00000012334	ddx1	100	84.865	ENSTGUG00000013096	DDX1	100	84.865	Taeniopygia_guttata
ENSSDUG00000012334	ddx1	99	92.977	ENSTRUG00000015765	ddx1	99	92.954	Takifugu_rubripes
ENSSDUG00000012334	ddx1	100	93.108	ENSTNIG00000016309	ddx1	100	93.108	Tetraodon_nigroviridis
ENSSDUG00000012334	ddx1	99	81.335	ENSTBEG00000008454	DDX1	100	81.335	Tupaia_belangeri
ENSSDUG00000012334	ddx1	100	84.730	ENSTTRG00000005081	DDX1	100	84.730	Tursiops_truncatus
ENSSDUG00000012334	ddx1	77	67.719	ENSUAMG00000017375	DDX1	96	67.719	Ursus_americanus
ENSSDUG00000012334	ddx1	99	84.605	ENSUMAG00000023450	DDX1	100	84.605	Ursus_maritimus
ENSSDUG00000012334	ddx1	85	88.361	ENSVPAG00000007764	DDX1	85	88.361	Vicugna_pacos
ENSSDUG00000012334	ddx1	99	84.626	ENSVVUG00000013085	DDX1	96	84.626	Vulpes_vulpes
ENSSDUG00000012334	ddx1	100	85.405	ENSXETG00000017825	ddx1	100	85.405	Xenopus_tropicalis
ENSSDUG00000012334	ddx1	100	89.692	ENSXCOG00000007082	ddx1	100	89.692	Xiphophorus_couchianus
ENSSDUG00000012334	ddx1	100	92.297	ENSXMAG00000004555	ddx1	100	92.297	Xiphophorus_maculatus