EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012345 (Gene tree)
Gene ID: 111229566
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 24754 bases
Position: chrBDQW01000002.1:8372708-8397461
Accession: 111229566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000016918	PIN_4	PF13638.6	9.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017225	-	5407	XM_022755971	ENSSDUP00000016918	961 (aa)	XP_022611692	UPI000BBEBCA6

Gene Model

Click here to download ENSSDUG00000012345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012345	swt1	58	34.596	ENSG00000116668	SWT1	60	34.589	Homo_sapiens
ENSSDUG00000012345	swt1	98	65.798	ENSAPOG00000014897	-	98	65.798	Acanthochromis_polyacanthus
ENSSDUG00000012345	swt1	58	35.000	ENSAMEG00000013585	SWT1	60	34.828	Ailuropoda_melanoleuca
ENSSDUG00000012345	swt1	98	66.493	ENSAOCG00000013932	swt1	98	66.493	Amphiprion_ocellaris
ENSSDUG00000012345	swt1	98	66.701	ENSAPEG00000009613	-	98	66.701	Amphiprion_percula
ENSSDUG00000012345	swt1	98	68.548	ENSATEG00000018946	swt1	98	68.548	Anabas_testudineus
ENSSDUG00000012345	swt1	58	37.759	ENSAPLG00000008607	SWT1	74	37.759	Anas_platyrhynchos
ENSSDUG00000012345	swt1	58	34.775	ENSACAG00000002276	SWT1	62	34.662	Anolis_carolinensis
ENSSDUG00000012345	swt1	58	33.846	ENSANAG00000027068	SWT1	60	33.846	Aotus_nancymaae
ENSSDUG00000012345	swt1	81	70.718	ENSACLG00000009742	swt1	98	70.718	Astatotilapia_calliptera
ENSSDUG00000012345	swt1	62	49.251	ENSAMXG00000010971	swt1	59	49.082	Astyanax_mexicanus
ENSSDUG00000012345	swt1	58	34.648	ENSCJAG00000005544	SWT1	60	34.648	Callithrix_jacchus
ENSSDUG00000012345	swt1	58	34.364	ENSCAFG00000013543	SWT1	60	34.164	Canis_familiaris
ENSSDUG00000012345	swt1	58	34.364	ENSCAFG00020015648	SWT1	64	34.364	Canis_lupus_dingo
ENSSDUG00000012345	swt1	58	35.284	ENSCHIG00000023511	SWT1	93	34.923	Capra_hircus
ENSSDUG00000012345	swt1	58	34.423	ENSTSYG00000010470	SWT1	60	34.423	Carlito_syrichta
ENSSDUG00000012345	swt1	53	34.457	ENSCPOG00000014251	SWT1	62	34.270	Cavia_porcellus
ENSSDUG00000012345	swt1	58	34.310	ENSCCAG00000033926	SWT1	60	34.310	Cebus_capucinus
ENSSDUG00000012345	swt1	58	34.305	ENSCATG00000042210	SWT1	92	34.305	Cercocebus_atys
ENSSDUG00000012345	swt1	58	34.471	ENSCLAG00000013959	SWT1	61	34.753	Chinchilla_lanigera
ENSSDUG00000012345	swt1	58	33.851	ENSCSAG00000012895	SWT1	60	34.197	Chlorocebus_sabaeus
ENSSDUG00000012345	swt1	58	38.079	ENSCPBG00000015691	SWT1	60	38.079	Chrysemys_picta_bellii
ENSSDUG00000012345	swt1	58	34.315	ENSCANG00000032207	SWT1	92	33.793	Colobus_angolensis_palliatus
ENSSDUG00000012345	swt1	58	34.708	ENSCGRG00001022955	Swt1	63	34.775	Cricetulus_griseus_chok1gshd
ENSSDUG00000012345	swt1	58	34.708	ENSCGRG00000010224	Swt1	61	34.775	Cricetulus_griseus_crigri
ENSSDUG00000012345	swt1	78	64.550	ENSCSEG00000017352	swt1	98	64.550	Cynoglossus_semilaevis
ENSSDUG00000012345	swt1	59	49.565	ENSDARG00000094010	swt1	61	47.267	Danio_rerio
ENSSDUG00000012345	swt1	51	34.503	ENSDNOG00000005254	SWT1	58	34.503	Dasypus_novemcinctus
ENSSDUG00000012345	swt1	58	34.418	ENSDORG00000010531	Swt1	65	34.354	Dipodomys_ordii
ENSSDUG00000012345	swt1	58	33.333	ENSEASG00005005530	SWT1	64	33.677	Equus_asinus_asinus
ENSSDUG00000012345	swt1	58	32.353	ENSECAG00000012085	SWT1	63	32.353	Equus_caballus
ENSSDUG00000012345	swt1	98	40.344	ENSELUG00000020565	swt1	98	40.622	Esox_lucius
ENSSDUG00000012345	swt1	58	34.197	ENSFCAG00000011286	SWT1	60	34.197	Felis_catus
ENSSDUG00000012345	swt1	58	35.605	ENSFALG00000003206	SWT1	64	34.711	Ficedula_albicollis
ENSSDUG00000012345	swt1	58	35.654	ENSFDAG00000007569	SWT1	62	35.484	Fukomys_damarensis
ENSSDUG00000012345	swt1	57	31.336	ENSGALG00000034230	SWT1	62	35.517	Gallus_gallus
ENSSDUG00000012345	swt1	99	50.709	ENSGAFG00000007803	-	98	50.514	Gambusia_affinis
ENSSDUG00000012345	swt1	58	38.153	ENSGAGG00000025050	SWT1	94	37.895	Gopherus_agassizii
ENSSDUG00000012345	swt1	53	34.566	ENSGGOG00000041167	-	92	34.375	Gorilla_gorilla
ENSSDUG00000012345	swt1	85	70.087	ENSHBUG00000006188	swt1	98	70.087	Haplochromis_burtoni
ENSSDUG00000012345	swt1	59	35.690	ENSHGLG00000006542	SWT1	65	35.642	Heterocephalus_glaber_female
ENSSDUG00000012345	swt1	59	35.690	ENSHGLG00100014408	SWT1	63	35.642	Heterocephalus_glaber_male
ENSSDUG00000012345	swt1	61	65.143	ENSHCOG00000016930	-	89	70.701	Hippocampus_comes
ENSSDUG00000012345	swt1	58	48.955	ENSIPUG00000009113	-	56	49.040	Ictalurus_punctatus
ENSSDUG00000012345	swt1	58	33.966	ENSSTOG00000010356	SWT1	61	34.138	Ictidomys_tridecemlineatus
ENSSDUG00000012345	swt1	58	35.445	ENSJJAG00000015927	Swt1	63	34.635	Jaculus_jaculus
ENSSDUG00000012345	swt1	100	53.760	ENSKMAG00000012533	swt1	98	53.512	Kryptolebias_marmoratus
ENSSDUG00000012345	swt1	96	61.152	ENSLBEG00000020663	-	97	61.267	Labrus_bergylta
ENSSDUG00000012345	swt1	58	37.629	ENSLACG00000009194	SWT1	81	37.271	Latimeria_chalumnae
ENSSDUG00000012345	swt1	56	43.262	ENSLOCG00000001749	swt1	97	42.190	Lepisosteus_oculatus
ENSSDUG00000012345	swt1	58	33.729	ENSLAFG00000004346	-	93	33.733	Loxodonta_africana
ENSSDUG00000012345	swt1	58	34.197	ENSMFAG00000031793	SWT1	93	33.677	Macaca_fascicularis
ENSSDUG00000012345	swt1	57	34.024	ENSMMUG00000013882	SWT1	92	33.391	Macaca_mulatta
ENSSDUG00000012345	swt1	58	34.197	ENSMNEG00000035502	SWT1	93	33.677	Macaca_nemestrina
ENSSDUG00000012345	swt1	58	34.359	ENSMLEG00000038692	SWT1	92	34.134	Mandrillus_leucophaeus
ENSSDUG00000012345	swt1	85	70.261	ENSMZEG00005018489	swt1	98	70.261	Maylandia_zebra
ENSSDUG00000012345	swt1	58	35.395	ENSMGAG00000000973	SWT1	93	35.395	Meleagris_gallopavo
ENSSDUG00000012345	swt1	58	32.509	ENSMAUG00000007996	Swt1	57	32.570	Mesocricetus_auratus
ENSSDUG00000012345	swt1	58	34.932	ENSMICG00000014975	SWT1	60	35.112	Microcebus_murinus
ENSSDUG00000012345	swt1	58	35.112	ENSMOCG00000009776	Swt1	60	35.112	Microtus_ochrogaster
ENSSDUG00000012345	swt1	58	34.602	ENSMODG00000007472	SWT1	59	34.602	Monodelphis_domestica
ENSSDUG00000012345	swt1	98	67.189	ENSMALG00000019308	swt1	98	66.911	Monopterus_albus
ENSSDUG00000012345	swt1	58	35.986	MGP_CAROLIEiJ_G0014692	Swt1	68	45.614	Mus_caroli
ENSSDUG00000012345	swt1	58	35.751	ENSMUSG00000052748	Swt1	63	46.250	Mus_musculus
ENSSDUG00000012345	swt1	58	35.726	MGP_PahariEiJ_G0027928	Swt1	64	46.250	Mus_pahari
ENSSDUG00000012345	swt1	58	36.130	MGP_SPRETEiJ_G0015499	Swt1	64	46.875	Mus_spretus
ENSSDUG00000012345	swt1	58	33.788	ENSMPUG00000011913	SWT1	61	33.904	Mustela_putorius_furo
ENSSDUG00000012345	swt1	58	33.966	ENSMLUG00000001142	SWT1	62	33.224	Myotis_lucifugus
ENSSDUG00000012345	swt1	58	34.940	ENSNGAG00000021080	Swt1	60	34.948	Nannospalax_galili
ENSSDUG00000012345	swt1	58	34.655	ENSNLEG00000018031	SWT1	60	34.655	Nomascus_leucogenys
ENSSDUG00000012345	swt1	85	68.174	ENSONIG00000009994	swt1	98	68.174	Oreochromis_niloticus
ENSSDUG00000012345	swt1	58	34.242	ENSOANG00000001013	-	70	33.895	Ornithorhynchus_anatinus
ENSSDUG00000012345	swt1	59	35.871	ENSOCUG00000004901	SWT1	62	36.088	Oryctolagus_cuniculus
ENSSDUG00000012345	swt1	99	50.451	ENSORLG00000009682	swt1	97	50.612	Oryzias_latipes
ENSSDUG00000012345	swt1	99	51.217	ENSORLG00020011654	swt1	98	50.758	Oryzias_latipes_hni
ENSSDUG00000012345	swt1	99	50.351	ENSORLG00015007734	swt1	98	50.408	Oryzias_latipes_hsok
ENSSDUG00000012345	swt1	98	51.426	ENSOMEG00000006607	swt1	98	51.324	Oryzias_melastigma
ENSSDUG00000012345	swt1	58	34.310	ENSOGAG00000016195	SWT1	60	34.310	Otolemur_garnettii
ENSSDUG00000012345	swt1	64	33.178	ENSOARG00000004156	SWT1	65	33.178	Ovis_aries
ENSSDUG00000012345	swt1	58	34.418	ENSPPAG00000021400	SWT1	60	34.412	Pan_paniscus
ENSSDUG00000012345	swt1	58	34.715	ENSPPRG00000023754	SWT1	60	34.715	Panthera_pardus
ENSSDUG00000012345	swt1	58	34.715	ENSPTIG00000021889	SWT1	60	34.715	Panthera_tigris_altaica
ENSSDUG00000012345	swt1	58	34.596	ENSPTRG00000001777	SWT1	60	34.589	Pan_troglodytes
ENSSDUG00000012345	swt1	58	33.962	ENSPANG00000005099	SWT1	92	34.134	Papio_anubis
ENSSDUG00000012345	swt1	58	48.511	ENSPKIG00000005979	swt1	59	47.878	Paramormyrops_kingsleyae
ENSSDUG00000012345	swt1	58	37.050	ENSPSIG00000008961	SWT1	60	37.050	Pelodiscus_sinensis
ENSSDUG00000012345	swt1	54	47.619	ENSPMGG00000000152	-	81	43.866	Periophthalmus_magnuspinnatus
ENSSDUG00000012345	swt1	58	35.800	ENSPEMG00000008208	Swt1	60	35.800	Peromyscus_maniculatus_bairdii
ENSSDUG00000012345	swt1	58	33.055	ENSPCIG00000002443	SWT1	60	32.888	Phascolarctos_cinereus
ENSSDUG00000012345	swt1	99	50.911	ENSPFOG00000010988	-	98	59.132	Poecilia_formosa
ENSSDUG00000012345	swt1	99	51.113	ENSPLAG00000022908	-	98	51.029	Poecilia_latipinna
ENSSDUG00000012345	swt1	99	50.913	ENSPMEG00000006943	-	98	50.825	Poecilia_mexicana
ENSSDUG00000012345	swt1	65	44.769	ENSPREG00000014723	-	86	44.146	Poecilia_reticulata
ENSSDUG00000012345	swt1	58	34.932	ENSPPYG00000000415	SWT1	60	34.932	Pongo_abelii
ENSSDUG00000012345	swt1	58	33.102	ENSPVAG00000005968	SWT1	60	32.582	Pteropus_vampyrus
ENSSDUG00000012345	swt1	85	70.261	ENSPNYG00000012934	swt1	98	70.261	Pundamilia_nyererei
ENSSDUG00000012345	swt1	68	45.559	ENSPNAG00000017795	swt1	98	38.191	Pygocentrus_nattereri
ENSSDUG00000012345	swt1	58	35.385	ENSRNOG00000032258	Swt1	62	35.274	Rattus_norvegicus
ENSSDUG00000012345	swt1	58	34.375	ENSRBIG00000040630	SWT1	92	34.201	Rhinopithecus_bieti
ENSSDUG00000012345	swt1	58	34.662	ENSSBOG00000028825	SWT1	61	34.483	Saimiri_boliviensis_boliviensis
ENSSDUG00000012345	swt1	58	35.334	ENSSHAG00000009241	SWT1	60	35.334	Sarcophilus_harrisii
ENSSDUG00000012345	swt1	58	48.940	ENSSFOG00015004895	swt1	55	48.587	Scleropages_formosus
ENSSDUG00000012345	swt1	97	66.031	ENSSMAG00000020761	-	92	66.704	Scophthalmus_maximus
ENSSDUG00000012345	swt1	100	97.919	ENSSLDG00000003821	swt1	100	97.919	Seriola_lalandi_dorsalis
ENSSDUG00000012345	swt1	58	37.393	ENSSPUG00000003899	SWT1	60	37.393	Sphenodon_punctatus
ENSSDUG00000012345	swt1	98	65.249	ENSSPAG00000001030	swt1	98	65.249	Stegastes_partitus
ENSSDUG00000012345	swt1	58	34.536	ENSSSCG00000015569	SWT1	62	34.880	Sus_scrofa
ENSSDUG00000012345	swt1	58	36.770	ENSTGUG00000003718	-	98	36.770	Taeniopygia_guttata
ENSSDUG00000012345	swt1	99	49.326	ENSTRUG00000006420	swt1	98	49.154	Takifugu_rubripes
ENSSDUG00000012345	swt1	58	33.563	ENSTTRG00000005914	SWT1	60	34.079	Tursiops_truncatus
ENSSDUG00000012345	swt1	58	34.310	ENSUAMG00000020937	SWT1	65	34.310	Ursus_americanus
ENSSDUG00000012345	swt1	58	34.310	ENSUMAG00000021918	SWT1	61	34.107	Ursus_maritimus
ENSSDUG00000012345	swt1	50	37.681	ENSVPAG00000011855	SWT1	52	37.681	Vicugna_pacos
ENSSDUG00000012345	swt1	58	34.021	ENSVVUG00000009182	SWT1	62	34.530	Vulpes_vulpes
ENSSDUG00000012345	swt1	99	51.980	ENSXMAG00000023472	-	98	52.268	Xiphophorus_maculatus