EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012419 (Gene tree)
Gene ID: 111229083
Gene Symbol: mrpl34
Alias: im:6901724|si:dkey-77a20.7
Full Name: mitochondrial ribosomal protein L34
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1597 bases
Position: chrBDQW01000226.1:3252821-3254417
Accession: 111229083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017010	Ribosomal_L34	PF00468.17	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017317	-	1105	XM_022755250	ENSSDUP00000017010	125 (aa)	XP_022610971	UPI000BBE244E

Gene Model

Click here to download ENSSDUG00000012419's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012419	mrpl34	100	81.746	ENSAPOG00000000430	mrpl34	100	81.746	Acanthochromis_polyacanthus
ENSSDUG00000012419	mrpl34	69	48.837	ENSAMEG00000010483	MRPL34	85	48.837	Ailuropoda_melanoleuca
ENSSDUG00000012419	mrpl34	100	80.159	ENSACIG00000020814	mrpl34	100	80.159	Amphilophus_citrinellus
ENSSDUG00000012419	mrpl34	100	81.746	ENSAOCG00000012210	mrpl34	100	81.746	Amphiprion_ocellaris
ENSSDUG00000012419	mrpl34	100	82.540	ENSAPEG00000015541	mrpl34	100	82.540	Amphiprion_percula
ENSSDUG00000012419	mrpl34	100	86.400	ENSATEG00000018636	mrpl34	100	86.400	Anabas_testudineus
ENSSDUG00000012419	mrpl34	100	73.810	ENSACLG00000008247	mrpl34	100	73.810	Astatotilapia_calliptera
ENSSDUG00000012419	mrpl34	100	56.800	ENSAMXG00000038851	mrpl34	100	56.800	Astyanax_mexicanus
ENSSDUG00000012419	mrpl34	64	50.588	ENSCAFG00000028802	MRPL34	94	50.588	Canis_familiaris
ENSSDUG00000012419	mrpl34	65	51.163	ENSCAFG00020010412	MRPL34	94	51.163	Canis_lupus_dingo
ENSSDUG00000012419	mrpl34	50	70.149	ENSCPBG00000012424	MRPL34	52	70.149	Chrysemys_picta_bellii
ENSSDUG00000012419	mrpl34	100	70.400	ENSCSEG00000011848	mrpl34	100	70.400	Cynoglossus_semilaevis
ENSSDUG00000012419	mrpl34	100	68.000	ENSCVAG00000000584	mrpl34	100	68.000	Cyprinodon_variegatus
ENSSDUG00000012419	mrpl34	100	53.175	ENSDARG00000092954	mrpl34	100	54.688	Danio_rerio
ENSSDUG00000012419	mrpl34	72	47.312	ENSDNOG00000033349	MRPL34	78	47.312	Dasypus_novemcinctus
ENSSDUG00000012419	mrpl34	72	47.778	ENSEASG00005002874	MRPL34	81	47.778	Equus_asinus_asinus
ENSSDUG00000012419	mrpl34	72	47.778	ENSECAG00000011693	MRPL34	81	47.778	Equus_caballus
ENSSDUG00000012419	mrpl34	70	49.425	ENSFCAG00000043549	MRPL34	76	49.425	Felis_catus
ENSSDUG00000012419	mrpl34	100	71.429	ENSFHEG00000005603	mrpl34	100	71.429	Fundulus_heteroclitus
ENSSDUG00000012419	mrpl34	66	56.818	ENSGALG00000036004	MRPL34	75	56.818	Gallus_gallus
ENSSDUG00000012419	mrpl34	100	60.317	ENSGAFG00000013133	mrpl34	100	60.317	Gambusia_affinis
ENSSDUG00000012419	mrpl34	66	57.778	ENSGAGG00000009651	MRPL34	74	57.778	Gopherus_agassizii
ENSSDUG00000012419	mrpl34	100	76.190	ENSHBUG00000007862	mrpl34	100	76.190	Haplochromis_burtoni
ENSSDUG00000012419	mrpl34	90	42.982	ENSHGLG00000003238	MRPL34	100	42.982	Heterocephalus_glaber_female
ENSSDUG00000012419	mrpl34	90	42.982	ENSHGLG00100013043	MRPL34	100	42.982	Heterocephalus_glaber_male
ENSSDUG00000012419	mrpl34	100	75.200	ENSHCOG00000013517	mrpl34	100	75.200	Hippocampus_comes
ENSSDUG00000012419	mrpl34	72	68.889	ENSIPUG00000008989	mrpl34	70	68.889	Ictalurus_punctatus
ENSSDUG00000012419	mrpl34	86	67.593	ENSKMAG00000015523	mrpl34	86	67.593	Kryptolebias_marmoratus
ENSSDUG00000012419	mrpl34	100	83.200	ENSLBEG00000013200	mrpl34	100	83.200	Labrus_bergylta
ENSSDUG00000012419	mrpl34	78	64.286	ENSLOCG00000002997	mrpl34	78	64.286	Lepisosteus_oculatus
ENSSDUG00000012419	mrpl34	83	47.619	ENSLAFG00000012255	MRPL34	88	47.619	Loxodonta_africana
ENSSDUG00000012419	mrpl34	100	78.400	ENSMAMG00000005626	mrpl34	100	78.400	Mastacembelus_armatus
ENSSDUG00000012419	mrpl34	100	76.190	ENSMZEG00005004188	mrpl34	100	76.190	Maylandia_zebra
ENSSDUG00000012419	mrpl34	100	77.600	ENSMMOG00000006218	mrpl34	100	77.600	Mola_mola
ENSSDUG00000012419	mrpl34	100	82.400	ENSMALG00000000991	mrpl34	100	82.400	Monopterus_albus
ENSSDUG00000012419	mrpl34	69	50.000	ENSMPUG00000015905	MRPL34	76	50.000	Mustela_putorius_furo
ENSSDUG00000012419	mrpl34	100	76.190	ENSNBRG00000001737	mrpl34	100	76.190	Neolamprologus_brichardi
ENSSDUG00000012419	mrpl34	100	76.984	ENSONIG00000010523	mrpl34	100	76.984	Oreochromis_niloticus
ENSSDUG00000012419	mrpl34	100	66.667	ENSORLG00000008708	mrpl34	100	66.667	Oryzias_latipes
ENSSDUG00000012419	mrpl34	100	67.460	ENSORLG00020013107	mrpl34	100	67.460	Oryzias_latipes_hni
ENSSDUG00000012419	mrpl34	100	66.667	ENSORLG00015009033	mrpl34	100	66.667	Oryzias_latipes_hsok
ENSSDUG00000012419	mrpl34	96	66.942	ENSOMEG00000005718	mrpl34	96	66.942	Oryzias_melastigma
ENSSDUG00000012419	mrpl34	69	50.000	ENSPPRG00000015405	MRPL34	74	50.000	Panthera_pardus
ENSSDUG00000012419	mrpl34	69	50.000	ENSPTIG00000011413	MRPL34	74	50.000	Panthera_tigris_altaica
ENSSDUG00000012419	mrpl34	50	70.149	ENSPSIG00000001128	MRPL34	97	70.149	Pelodiscus_sinensis
ENSSDUG00000012419	mrpl34	100	66.400	ENSPMGG00000014379	mrpl34	100	66.400	Periophthalmus_magnuspinnatus
ENSSDUG00000012419	mrpl34	100	68.254	ENSPFOG00000001683	MRPL34	100	68.254	Poecilia_formosa
ENSSDUG00000012419	mrpl34	100	68.254	ENSPLAG00000016453	mrpl34	100	68.254	Poecilia_latipinna
ENSSDUG00000012419	mrpl34	100	68.254	ENSPMEG00000013867	MRPL34	100	68.254	Poecilia_mexicana
ENSSDUG00000012419	mrpl34	100	64.286	ENSPREG00000008577	mrpl34	100	64.286	Poecilia_reticulata
ENSSDUG00000012419	mrpl34	91	44.828	ENSPCOG00000020760	-	56	45.614	Propithecus_coquereli
ENSSDUG00000012419	mrpl34	100	76.190	ENSPNYG00000002734	mrpl34	100	76.190	Pundamilia_nyererei
ENSSDUG00000012419	mrpl34	57	73.973	ENSPNAG00000019266	mrpl34	78	73.973	Pygocentrus_nattereri
ENSSDUG00000012419	mrpl34	72	44.444	ENSRBIG00000005154	-	55	64.706	Rhinopithecus_bieti
ENSSDUG00000012419	mrpl34	100	86.400	ENSSMAG00000006005	mrpl34	100	86.400	Scophthalmus_maximus
ENSSDUG00000012419	mrpl34	100	98.400	ENSSLDG00000021585	mrpl34	100	98.400	Seriola_lalandi_dorsalis
ENSSDUG00000012419	mrpl34	100	81.746	ENSSPAG00000000276	mrpl34	100	81.746	Stegastes_partitus
ENSSDUG00000012419	mrpl34	100	76.800	ENSTRUG00000024533	mrpl34	100	76.800	Takifugu_rubripes
ENSSDUG00000012419	mrpl34	98	76.230	ENSTNIG00000011052	mrpl34	100	76.230	Tetraodon_nigroviridis
ENSSDUG00000012419	mrpl34	72	48.889	ENSTBEG00000012656	MRPL34	80	48.889	Tupaia_belangeri
ENSSDUG00000012419	mrpl34	80	45.000	ENSTTRG00000003137	MRPL34	88	45.000	Tursiops_truncatus
ENSSDUG00000012419	mrpl34	69	48.837	ENSUAMG00000023002	-	81	48.837	Ursus_americanus
ENSSDUG00000012419	mrpl34	69	51.163	ENSUAMG00000011536	-	81	51.163	Ursus_americanus
ENSSDUG00000012419	mrpl34	69	48.837	ENSUMAG00000004918	-	81	48.837	Ursus_maritimus
ENSSDUG00000012419	mrpl34	69	51.163	ENSUMAG00000011847	-	81	51.163	Ursus_maritimus
ENSSDUG00000012419	mrpl34	82	47.573	ENSVVUG00000016159	MRPL34	95	47.573	Vulpes_vulpes
ENSSDUG00000012419	mrpl34	100	61.111	ENSXCOG00000007225	mrpl34	100	61.111	Xiphophorus_couchianus
ENSSDUG00000012419	mrpl34	100	64.286	ENSXMAG00000021725	MRPL34	100	64.286	Xiphophorus_maculatus