EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000012511 (Gene tree)
Gene ID: 111233429
Gene Symbol: dhx40
Alias: -
Full Name: DEAH-box helicase 40
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4897 bases
Position: chrBDQW01000391.1:493479-498375
Accession: 111233429
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017163	DEAD	PF00270.29	8.2e-07	1	1
ENSSDUP00000017206	DEAD	PF00270.29	8.6e-07	1	1
ENSSDUP00000017206	HA2	PF04408.23	1.9e-17	1	1
ENSSDUP00000017163	HA2	PF04408.23	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017519	-	2235	-	ENSSDUP00000017206	744 (aa)	-	-
ENSSDUT00000017476	-	2552	XM_022761237	ENSSDUP00000017163	740 (aa)	XP_022616958	UPI000BBF1EC5

Gene Model

Click here to download ENSSDUG00000012511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000012511	dhx40	84	37.963	ENSSDUG00000023657	dhx36	62	39.394
ENSSDUG00000012511	dhx40	89	40.119	ENSSDUG00000016954	zgc:158828	92	40.119
ENSSDUG00000012511	dhx40	87	38.767	ENSSDUG00000009022	dhx57	50	38.942
ENSSDUG00000012511	dhx40	85	44.758	ENSSDUG00000002265	dhx37	57	44.758
ENSSDUG00000012511	dhx40	92	40.316	ENSSDUG00000002650	DHX15	86	40.316
ENSSDUG00000012511	dhx40	89	38.507	ENSSDUG00000017798	dhx33	93	38.806
ENSSDUG00000012511	dhx40	90	40.501	ENSSDUG00000007372	dhx15	84	40.501
ENSSDUG00000012511	dhx40	92	41.583	ENSSDUG00000010774	dhx8	54	43.075
ENSSDUG00000012511	dhx40	89	42.857	ENSSDUG00000010822	dhx8	52	42.857
ENSSDUG00000012511	dhx40	89	43.844	ENSSDUG00000006948	dhx16	60	43.844
ENSSDUG00000012511	dhx40	91	40.795	ENSSDUG00000001413	dhx38	55	39.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012511	dhx40	98	65.975	ENSG00000108406	DHX40	99	62.681	Homo_sapiens
ENSSDUG00000012511	dhx40	100	92.162	ENSAPOG00000018707	dhx40	100	92.162	Acanthochromis_polyacanthus
ENSSDUG00000012511	dhx40	98	65.837	ENSAMEG00000011567	DHX40	91	66.011	Ailuropoda_melanoleuca
ENSSDUG00000012511	dhx40	100	91.622	ENSACIG00000020220	dhx40	100	91.622	Amphilophus_citrinellus
ENSSDUG00000012511	dhx40	100	92.568	ENSAOCG00000000250	dhx40	100	92.568	Amphiprion_ocellaris
ENSSDUG00000012511	dhx40	100	91.892	ENSAPEG00000022898	dhx40	99	91.892	Amphiprion_percula
ENSSDUG00000012511	dhx40	100	92.297	ENSATEG00000023287	dhx40	100	92.297	Anabas_testudineus
ENSSDUG00000012511	dhx40	89	69.618	ENSAPLG00000013368	DHX40	97	69.706	Anas_platyrhynchos
ENSSDUG00000012511	dhx40	96	68.864	ENSACAG00000012418	DHX40	96	69.468	Anolis_carolinensis
ENSSDUG00000012511	dhx40	98	65.975	ENSANAG00000019888	DHX40	91	66.152	Aotus_nancymaae
ENSSDUG00000012511	dhx40	98	90.659	ENSACLG00000024213	dhx40	98	90.659	Astatotilapia_calliptera
ENSSDUG00000012511	dhx40	80	76.610	ENSAMXG00000002031	dhx40	94	76.610	Astyanax_mexicanus
ENSSDUG00000012511	dhx40	98	65.975	ENSBTAG00000017868	DHX40	91	66.152	Bos_taurus
ENSSDUG00000012511	dhx40	98	65.837	ENSCJAG00000001554	DHX40	91	66.011	Callithrix_jacchus
ENSSDUG00000012511	dhx40	98	65.698	ENSCAFG00000017625	DHX40	91	65.266	Canis_familiaris
ENSSDUG00000012511	dhx40	98	65.837	ENSCAFG00020026016	DHX40	83	66.011	Canis_lupus_dingo
ENSSDUG00000012511	dhx40	98	65.975	ENSCHIG00000016173	DHX40	91	66.152	Capra_hircus
ENSSDUG00000012511	dhx40	98	65.837	ENSTSYG00000034797	DHX40	91	66.011	Carlito_syrichta
ENSSDUG00000012511	dhx40	92	57.038	ENSCAPG00000016034	DHX40	91	65.269	Cavia_aperea
ENSSDUG00000012511	dhx40	98	65.698	ENSCPOG00000003432	DHX40	100	65.269	Cavia_porcellus
ENSSDUG00000012511	dhx40	89	67.114	ENSCCAG00000028712	DHX40	93	67.431	Cebus_capucinus
ENSSDUG00000012511	dhx40	98	62.534	ENSCATG00000030038	DHX40	91	62.657	Cercocebus_atys
ENSSDUG00000012511	dhx40	98	65.837	ENSCLAG00000012016	DHX40	100	65.269	Chinchilla_lanigera
ENSSDUG00000012511	dhx40	86	61.672	ENSCSAG00000005860	DHX40	97	61.798	Chlorocebus_sabaeus
ENSSDUG00000012511	dhx40	98	66.113	ENSCHOG00000004423	DHX40	96	66.292	Choloepus_hoffmanni
ENSSDUG00000012511	dhx40	99	70.919	ENSCPBG00000006085	DHX40	96	70.735	Chrysemys_picta_bellii
ENSSDUG00000012511	dhx40	98	65.975	ENSCANG00000038492	DHX40	91	66.152	Colobus_angolensis_palliatus
ENSSDUG00000012511	dhx40	98	65.698	ENSCGRG00001000389	Dhx40	91	65.871	Cricetulus_griseus_chok1gshd
ENSSDUG00000012511	dhx40	98	65.698	ENSCGRG00000009491	Dhx40	91	65.871	Cricetulus_griseus_crigri
ENSSDUG00000012511	dhx40	99	86.216	ENSCSEG00000002696	dhx40	98	86.557	Cynoglossus_semilaevis
ENSSDUG00000012511	dhx40	100	88.243	ENSCVAG00000018991	dhx40	98	88.324	Cyprinodon_variegatus
ENSSDUG00000012511	dhx40	99	75.510	ENSDARG00000041586	dhx40	99	76.341	Danio_rerio
ENSSDUG00000012511	dhx40	98	66.252	ENSDNOG00000025497	DHX40	91	66.433	Dasypus_novemcinctus
ENSSDUG00000012511	dhx40	97	62.917	ENSDORG00000006521	Dhx40	91	62.781	Dipodomys_ordii
ENSSDUG00000012511	dhx40	79	56.849	ENSETEG00000018771	DHX40	75	56.849	Echinops_telfairi
ENSSDUG00000012511	dhx40	98	65.975	ENSEASG00005002476	DHX40	91	66.152	Equus_asinus_asinus
ENSSDUG00000012511	dhx40	98	65.975	ENSECAG00000018606	DHX40	91	66.152	Equus_caballus
ENSSDUG00000012511	dhx40	98	62.517	ENSEEUG00000002531	DHX40	91	62.640	Erinaceus_europaeus
ENSSDUG00000012511	dhx40	99	82.861	ENSELUG00000008644	dhx40	98	82.740	Esox_lucius
ENSSDUG00000012511	dhx40	98	65.975	ENSFCAG00000001409	DHX40	91	66.152	Felis_catus
ENSSDUG00000012511	dhx40	97	68.333	ENSFALG00000005587	DHX40	97	68.258	Ficedula_albicollis
ENSSDUG00000012511	dhx40	98	65.837	ENSFDAG00000017214	DHX40	100	65.269	Fukomys_damarensis
ENSSDUG00000012511	dhx40	100	89.189	ENSFHEG00000001190	dhx40	100	89.189	Fundulus_heteroclitus
ENSSDUG00000012511	dhx40	97	82.238	ENSGMOG00000001188	dhx40	99	82.163	Gadus_morhua
ENSSDUG00000012511	dhx40	84	68.429	ENSGALG00000005126	DHX40	97	68.344	Gallus_gallus
ENSSDUG00000012511	dhx40	100	88.784	ENSGAFG00000014480	dhx40	100	88.784	Gambusia_affinis
ENSSDUG00000012511	dhx40	97	90.821	ENSGACG00000006300	dhx40	98	90.871	Gasterosteus_aculeatus
ENSSDUG00000012511	dhx40	99	70.233	ENSGAGG00000024012	DHX40	96	70.042	Gopherus_agassizii
ENSSDUG00000012511	dhx40	52	62.629	ENSGGOG00000042982	-	100	62.629	Gorilla_gorilla
ENSSDUG00000012511	dhx40	98	90.659	ENSHBUG00000022398	dhx40	98	90.659	Haplochromis_burtoni
ENSSDUG00000012511	dhx40	97	65.972	ENSHGLG00000006600	DHX40	100	65.269	Heterocephalus_glaber_female
ENSSDUG00000012511	dhx40	85	57.302	ENSHGLG00000006411	-	89	57.302	Heterocephalus_glaber_female
ENSSDUG00000012511	dhx40	85	57.302	ENSHGLG00100009091	-	88	57.302	Heterocephalus_glaber_male
ENSSDUG00000012511	dhx40	97	65.972	ENSHGLG00100009935	-	100	65.269	Heterocephalus_glaber_male
ENSSDUG00000012511	dhx40	100	87.027	ENSHCOG00000012913	dhx40	97	87.363	Hippocampus_comes
ENSSDUG00000012511	dhx40	98	77.885	ENSIPUG00000015673	dhx40	97	77.994	Ictalurus_punctatus
ENSSDUG00000012511	dhx40	98	61.687	ENSSTOG00000016219	DHX40	100	65.269	Ictidomys_tridecemlineatus
ENSSDUG00000012511	dhx40	98	62.517	ENSJJAG00000010433	Dhx40	91	62.781	Jaculus_jaculus
ENSSDUG00000012511	dhx40	98	89.011	ENSKMAG00000003505	dhx40	98	89.011	Kryptolebias_marmoratus
ENSSDUG00000012511	dhx40	97	91.074	ENSLBEG00000018707	dhx40	98	91.074	Labrus_bergylta
ENSSDUG00000012511	dhx40	98	73.140	ENSLACG00000008892	DHX40	95	73.259	Latimeria_chalumnae
ENSSDUG00000012511	dhx40	98	71.841	ENSLOCG00000003916	dhx40	98	71.688	Lepisosteus_oculatus
ENSSDUG00000012511	dhx40	98	65.698	ENSLAFG00000000087	DHX40	91	65.871	Loxodonta_africana
ENSSDUG00000012511	dhx40	98	65.975	ENSMFAG00000041526	DHX40	91	66.152	Macaca_fascicularis
ENSSDUG00000012511	dhx40	98	61.411	ENSMNEG00000043921	DHX40	91	61.517	Macaca_nemestrina
ENSSDUG00000012511	dhx40	98	65.975	ENSMLEG00000043033	DHX40	91	66.152	Mandrillus_leucophaeus
ENSSDUG00000012511	dhx40	100	92.838	ENSMAMG00000001985	dhx40	100	92.838	Mastacembelus_armatus
ENSSDUG00000012511	dhx40	98	90.797	ENSMZEG00005013826	dhx40	98	90.797	Maylandia_zebra
ENSSDUG00000012511	dhx40	86	68.396	ENSMGAG00000007238	DHX40	97	68.312	Meleagris_gallopavo
ENSSDUG00000012511	dhx40	86	67.500	ENSMAUG00000014047	Dhx40	86	67.500	Mesocricetus_auratus
ENSSDUG00000012511	dhx40	98	65.975	ENSMICG00000027647	DHX40	91	66.152	Microcebus_murinus
ENSSDUG00000012511	dhx40	98	65.422	ENSMOCG00000022697	Dhx40	100	65.269	Microtus_ochrogaster
ENSSDUG00000012511	dhx40	98	87.088	ENSMMOG00000005353	dhx40	97	87.088	Mola_mola
ENSSDUG00000012511	dhx40	97	66.528	ENSMODG00000014468	DHX40	92	66.573	Monodelphis_domestica
ENSSDUG00000012511	dhx40	100	92.297	ENSMALG00000012529	dhx40	98	92.308	Monopterus_albus
ENSSDUG00000012511	dhx40	98	65.837	MGP_CAROLIEiJ_G0016920	Dhx40	100	64.671	Mus_caroli
ENSSDUG00000012511	dhx40	98	65.975	ENSMUSG00000018425	Dhx40	100	64.671	Mus_musculus
ENSSDUG00000012511	dhx40	98	65.698	MGP_PahariEiJ_G0018050	Dhx40	100	64.671	Mus_pahari
ENSSDUG00000012511	dhx40	98	65.975	MGP_SPRETEiJ_G0017766	Dhx40	100	64.671	Mus_spretus
ENSSDUG00000012511	dhx40	98	65.975	ENSMPUG00000015213	DHX40	91	66.152	Mustela_putorius_furo
ENSSDUG00000012511	dhx40	98	65.884	ENSMLUG00000003644	DHX40	91	66.059	Myotis_lucifugus
ENSSDUG00000012511	dhx40	98	65.698	ENSNGAG00000014507	Dhx40	100	65.269	Nannospalax_galili
ENSSDUG00000012511	dhx40	100	90.000	ENSNBRG00000018144	dhx40	100	90.000	Neolamprologus_brichardi
ENSSDUG00000012511	dhx40	75	67.500	ENSMEUG00000002887	-	85	67.500	Notamacropus_eugenii
ENSSDUG00000012511	dhx40	98	65.560	ENSODEG00000013635	DHX40	100	65.269	Octodon_degus
ENSSDUG00000012511	dhx40	97	91.690	ENSONIG00000005195	dhx40	99	91.597	Oreochromis_niloticus
ENSSDUG00000012511	dhx40	99	72.016	ENSOANG00000008516	DHX40	96	72.122	Ornithorhynchus_anatinus
ENSSDUG00000012511	dhx40	98	89.011	ENSORLG00000014185	dhx40	98	89.246	Oryzias_latipes
ENSSDUG00000012511	dhx40	98	88.462	ENSORLG00015016235	dhx40	98	88.687	Oryzias_latipes_hsok
ENSSDUG00000012511	dhx40	98	87.088	ENSOMEG00000006570	dhx40	98	87.151	Oryzias_melastigma
ENSSDUG00000012511	dhx40	98	66.113	ENSOGAG00000007790	DHX40	91	66.292	Otolemur_garnettii
ENSSDUG00000012511	dhx40	98	65.975	ENSOARG00000012632	DHX40	91	66.152	Ovis_aries
ENSSDUG00000012511	dhx40	98	65.698	ENSPPAG00000032782	DHX40	91	65.871	Pan_paniscus
ENSSDUG00000012511	dhx40	98	65.975	ENSPPRG00000010073	DHX40	91	66.152	Panthera_pardus
ENSSDUG00000012511	dhx40	98	65.837	ENSPTIG00000006557	DHX40	91	66.011	Panthera_tigris_altaica
ENSSDUG00000012511	dhx40	98	65.975	ENSPANG00000022266	DHX40	91	66.152	Papio_anubis
ENSSDUG00000012511	dhx40	98	76.754	ENSPKIG00000013016	dhx40	96	76.676	Paramormyrops_kingsleyae
ENSSDUG00000012511	dhx40	99	70.919	ENSPSIG00000010463	DHX40	91	70.735	Pelodiscus_sinensis
ENSSDUG00000012511	dhx40	99	85.442	ENSPMGG00000015257	dhx40	99	85.440	Periophthalmus_magnuspinnatus
ENSSDUG00000012511	dhx40	98	65.975	ENSPEMG00000013338	Dhx40	100	65.269	Peromyscus_maniculatus_bairdii
ENSSDUG00000012511	dhx40	97	66.852	ENSPCIG00000021874	DHX40	92	66.994	Phascolarctos_cinereus
ENSSDUG00000012511	dhx40	100	89.054	ENSPFOG00000006579	dhx40	100	89.054	Poecilia_formosa
ENSSDUG00000012511	dhx40	100	89.054	ENSPLAG00000007062	dhx40	100	89.054	Poecilia_latipinna
ENSSDUG00000012511	dhx40	100	88.919	ENSPMEG00000008446	dhx40	100	88.919	Poecilia_mexicana
ENSSDUG00000012511	dhx40	100	88.919	ENSPREG00000005584	dhx40	98	89.011	Poecilia_reticulata
ENSSDUG00000012511	dhx40	98	62.656	ENSPPYG00000008812	DHX40	91	62.781	Pongo_abelii
ENSSDUG00000012511	dhx40	75	66.078	ENSPCAG00000006468	DHX40	76	66.078	Procavia_capensis
ENSSDUG00000012511	dhx40	77	60.633	ENSPCOG00000008219	DHX40	83	60.753	Propithecus_coquereli
ENSSDUG00000012511	dhx40	98	90.110	ENSPNYG00000013343	dhx40	98	90.110	Pundamilia_nyererei
ENSSDUG00000012511	dhx40	99	71.951	ENSPNAG00000024815	dhx40	98	72.115	Pygocentrus_nattereri
ENSSDUG00000012511	dhx40	98	65.975	ENSRNOG00000004549	Dhx40	91	66.152	Rattus_norvegicus
ENSSDUG00000012511	dhx40	98	65.975	ENSSBOG00000024911	DHX40	91	66.152	Saimiri_boliviensis_boliviensis
ENSSDUG00000012511	dhx40	97	66.574	ENSSHAG00000016859	DHX40	92	66.713	Sarcophilus_harrisii
ENSSDUG00000012511	dhx40	99	76.535	ENSSFOG00015003020	dhx40	97	76.763	Scleropages_formosus
ENSSDUG00000012511	dhx40	99	92.339	ENSSMAG00000001178	dhx40	99	92.445	Scophthalmus_maximus
ENSSDUG00000012511	dhx40	100	99.054	ENSSLDG00000010146	dhx40	100	99.054	Seriola_lalandi_dorsalis
ENSSDUG00000012511	dhx40	84	65.942	ENSSARG00000009800	DHX40	78	66.253	Sorex_araneus
ENSSDUG00000012511	dhx40	97	71.170	ENSSPUG00000016309	DHX40	95	71.067	Sphenodon_punctatus
ENSSDUG00000012511	dhx40	98	91.896	ENSSPAG00000015901	dhx40	98	91.896	Stegastes_partitus
ENSSDUG00000012511	dhx40	98	65.975	ENSSSCG00000017665	DHX40	91	66.152	Sus_scrofa
ENSSDUG00000012511	dhx40	97	69.071	ENSTGUG00000007512	DHX40	97	68.961	Taeniopygia_guttata
ENSSDUG00000012511	dhx40	99	81.055	ENSTRUG00000010369	dhx40	98	80.907	Takifugu_rubripes
ENSSDUG00000012511	dhx40	97	81.667	ENSTNIG00000004503	dhx40	99	81.461	Tetraodon_nigroviridis
ENSSDUG00000012511	dhx40	98	65.145	ENSTBEG00000014980	DHX40	91	65.449	Tupaia_belangeri
ENSSDUG00000012511	dhx40	97	62.170	ENSTTRG00000017203	DHX40	91	62.360	Tursiops_truncatus
ENSSDUG00000012511	dhx40	98	65.837	ENSUAMG00000009734	DHX40	97	66.619	Ursus_americanus
ENSSDUG00000012511	dhx40	98	65.837	ENSUMAG00000022721	DHX40	91	66.011	Ursus_maritimus
ENSSDUG00000012511	dhx40	98	65.975	ENSVPAG00000009355	DHX40	95	66.152	Vicugna_pacos
ENSSDUG00000012511	dhx40	98	65.837	ENSVVUG00000013502	DHX40	83	66.011	Vulpes_vulpes
ENSSDUG00000012511	dhx40	97	65.512	ENSXETG00000010939	dhx40	98	65.954	Xenopus_tropicalis
ENSSDUG00000012511	dhx40	98	88.414	ENSXCOG00000001822	dhx40	98	88.414	Xiphophorus_couchianus
ENSSDUG00000012511	dhx40	100	88.514	ENSXMAG00000012466	dhx40	100	88.514	Xiphophorus_maculatus