EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012514 (Gene tree)
Gene ID: 111229476
Gene Symbol: xpot
Alias: si:ch211-286m4.4
Full Name: exportin for tRNA
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 15952 bases
Position: chrBDQW01000236.1:754260-770211
Accession: 111229476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017236	Xpo1	PF08389.12	2.2e-44	1	1
ENSSDUP00000017182	Xpo1	PF08389.12	4.3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017495	-	7964	XM_022755808	ENSSDUP00000017182	971 (aa)	XP_022611529	UPI000BBF2375
ENSSDUT00000017552	-	2838	-	ENSSDUP00000017236	945 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000012514's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012514	xpot	99	80.125	ENSG00000184575	XPOT	100	81.667	Homo_sapiens
ENSSDUG00000012514	xpot	100	95.778	ENSAPOG00000001362	xpot	100	95.778	Acanthochromis_polyacanthus
ENSSDUG00000012514	xpot	99	79.813	ENSAMEG00000018109	XPOT	99	79.813	Ailuropoda_melanoleuca
ENSSDUG00000012514	xpot	98	95.912	ENSACIG00000009016	xpot	99	95.912	Amphilophus_citrinellus
ENSSDUG00000012514	xpot	100	95.675	ENSAOCG00000005711	xpot	100	95.675	Amphiprion_ocellaris
ENSSDUG00000012514	xpot	100	95.675	ENSAPEG00000024660	XPOT	100	95.675	Amphiprion_percula
ENSSDUG00000012514	xpot	58	96.064	ENSAPEG00000024714	xpot	99	96.064	Amphiprion_percula
ENSSDUG00000012514	xpot	100	96.704	ENSATEG00000000675	xpot	100	96.704	Anabas_testudineus
ENSSDUG00000012514	xpot	99	80.749	ENSAPLG00000008073	XPOT	99	80.749	Anas_platyrhynchos
ENSSDUG00000012514	xpot	99	79.292	ENSACAG00000003154	XPOT	99	79.292	Anolis_carolinensis
ENSSDUG00000012514	xpot	97	67.800	ENSANAG00000032778	-	94	73.366	Aotus_nancymaae
ENSSDUG00000012514	xpot	99	65.036	ENSANAG00000029914	-	99	65.453	Aotus_nancymaae
ENSSDUG00000012514	xpot	100	94.645	ENSACLG00000008404	xpot	100	94.645	Astatotilapia_calliptera
ENSSDUG00000012514	xpot	100	88.374	ENSAMXG00000013542	xpot	100	88.374	Astyanax_mexicanus
ENSSDUG00000012514	xpot	99	79.917	ENSBTAG00000026962	XPOT	99	79.917	Bos_taurus
ENSSDUG00000012514	xpot	99	80.000	ENSCJAG00000014762	XPOT	95	80.000	Callithrix_jacchus
ENSSDUG00000012514	xpot	99	80.333	ENSCAFG00000000352	XPOT	99	80.333	Canis_familiaris
ENSSDUG00000012514	xpot	99	80.333	ENSCAFG00020019527	XPOT	100	80.042	Canis_lupus_dingo
ENSSDUG00000012514	xpot	99	80.125	ENSCHIG00000018310	XPOT	99	80.125	Capra_hircus
ENSSDUG00000012514	xpot	99	79.917	ENSTSYG00000008852	XPOT	99	79.917	Carlito_syrichta
ENSSDUG00000012514	xpot	99	60.991	ENSCAPG00000001620	XPOT	99	60.991	Cavia_aperea
ENSSDUG00000012514	xpot	99	80.125	ENSCPOG00000027042	XPOT	99	80.125	Cavia_porcellus
ENSSDUG00000012514	xpot	86	74.810	ENSCCAG00000035803	XPOT	97	78.881	Cebus_capucinus
ENSSDUG00000012514	xpot	99	80.125	ENSCATG00000037826	XPOT	99	80.125	Cercocebus_atys
ENSSDUG00000012514	xpot	99	60.312	ENSCATG00000039901	-	96	63.832	Cercocebus_atys
ENSSDUG00000012514	xpot	99	79.813	ENSCLAG00000011382	XPOT	99	79.813	Chinchilla_lanigera
ENSSDUG00000012514	xpot	99	80.125	ENSCSAG00000004475	XPOT	99	80.125	Chlorocebus_sabaeus
ENSSDUG00000012514	xpot	65	81.440	ENSCHOG00000000288	-	68	81.440	Choloepus_hoffmanni
ENSSDUG00000012514	xpot	99	80.229	ENSCPBG00000001003	XPOT	99	80.229	Chrysemys_picta_bellii
ENSSDUG00000012514	xpot	98	43.117	ENSCSAVG00000001681	-	99	43.117	Ciona_savignyi
ENSSDUG00000012514	xpot	96	58.404	ENSCANG00000030844	-	99	59.149	Colobus_angolensis_palliatus
ENSSDUG00000012514	xpot	99	80.021	ENSCANG00000033371	XPOT	99	80.021	Colobus_angolensis_palliatus
ENSSDUG00000012514	xpot	99	79.084	ENSCGRG00001016835	Xpot	99	79.084	Cricetulus_griseus_chok1gshd
ENSSDUG00000012514	xpot	99	78.690	ENSCGRG00000000577	Xpot	99	78.690	Cricetulus_griseus_crigri
ENSSDUG00000012514	xpot	100	94.130	ENSCSEG00000003973	xpot	100	94.130	Cynoglossus_semilaevis
ENSSDUG00000012514	xpot	100	92.070	ENSCVAG00000020453	xpot	100	92.070	Cyprinodon_variegatus
ENSSDUG00000012514	xpot	100	86.523	ENSDARG00000099652	xpot	100	86.523	Danio_rerio
ENSSDUG00000012514	xpot	99	80.229	ENSDORG00000000259	Xpot	99	80.229	Dipodomys_ordii
ENSSDUG00000012514	xpot	54	77.928	ENSETEG00000002981	-	55	78.261	Echinops_telfairi
ENSSDUG00000012514	xpot	91	56.869	ENSEBUG00000007650	xpot	99	57.509	Eptatretus_burgeri
ENSSDUG00000012514	xpot	99	79.466	ENSEASG00005007701	XPOT	99	79.466	Equus_asinus_asinus
ENSSDUG00000012514	xpot	99	79.466	ENSECAG00000018336	XPOT	94	79.545	Equus_caballus
ENSSDUG00000012514	xpot	85	84.437	ENSEEUG00000009700	XPOT	86	84.437	Erinaceus_europaeus
ENSSDUG00000012514	xpot	75	83.028	ENSELUG00000009337	xpot	96	86.813	Esox_lucius
ENSSDUG00000012514	xpot	99	80.125	ENSFCAG00000012360	XPOT	99	80.125	Felis_catus
ENSSDUG00000012514	xpot	99	80.437	ENSFALG00000009938	XPOT	99	80.437	Ficedula_albicollis
ENSSDUG00000012514	xpot	99	79.666	ENSFDAG00000012640	XPOT	99	79.666	Fukomys_damarensis
ENSSDUG00000012514	xpot	82	90.638	ENSFHEG00000009648	xpot	99	90.638	Fundulus_heteroclitus
ENSSDUG00000012514	xpot	92	87.591	ENSGMOG00000018888	xpot	93	87.591	Gadus_morhua
ENSSDUG00000012514	xpot	99	80.645	ENSGALG00000009835	XPOT	99	80.645	Gallus_gallus
ENSSDUG00000012514	xpot	100	92.482	ENSGAFG00000004150	xpot	100	92.482	Gambusia_affinis
ENSSDUG00000012514	xpot	99	88.144	ENSGACG00000000589	xpot	100	88.144	Gasterosteus_aculeatus
ENSSDUG00000012514	xpot	99	80.229	ENSGAGG00000022917	XPOT	99	80.229	Gopherus_agassizii
ENSSDUG00000012514	xpot	81	72.131	ENSGGOG00000027170	-	95	70.253	Gorilla_gorilla
ENSSDUG00000012514	xpot	99	80.125	ENSGGOG00000006089	XPOT	99	80.125	Gorilla_gorilla
ENSSDUG00000012514	xpot	100	94.748	ENSHBUG00000020681	xpot	100	94.748	Haplochromis_burtoni
ENSSDUG00000012514	xpot	98	79.665	ENSHGLG00000005833	XPOT	99	79.665	Heterocephalus_glaber_female
ENSSDUG00000012514	xpot	99	79.709	ENSHGLG00100000810	XPOT	99	79.709	Heterocephalus_glaber_male
ENSSDUG00000012514	xpot	99	82.225	ENSHCOG00000006415	xpot	100	82.225	Hippocampus_comes
ENSSDUG00000012514	xpot	100	87.449	ENSIPUG00000015271	xpot	100	87.449	Ictalurus_punctatus
ENSSDUG00000012514	xpot	99	80.021	ENSSTOG00000021805	XPOT	99	80.021	Ictidomys_tridecemlineatus
ENSSDUG00000012514	xpot	98	77.463	ENSJJAG00000019671	-	98	77.463	Jaculus_jaculus
ENSSDUG00000012514	xpot	99	67.570	ENSJJAG00000014767	-	99	67.779	Jaculus_jaculus
ENSSDUG00000012514	xpot	94	93.743	ENSKMAG00000019126	xpot	100	93.743	Kryptolebias_marmoratus
ENSSDUG00000012514	xpot	100	94.954	ENSLBEG00000000178	xpot	100	94.954	Labrus_bergylta
ENSSDUG00000012514	xpot	99	78.505	ENSLACG00000014355	XPOT	99	78.505	Latimeria_chalumnae
ENSSDUG00000012514	xpot	99	84.576	ENSLOCG00000016512	xpot	100	84.576	Lepisosteus_oculatus
ENSSDUG00000012514	xpot	99	80.042	ENSLAFG00000009829	XPOT	99	80.042	Loxodonta_africana
ENSSDUG00000012514	xpot	99	80.125	ENSMFAG00000032644	XPOT	99	80.125	Macaca_fascicularis
ENSSDUG00000012514	xpot	99	62.083	ENSMFAG00000038180	-	99	62.083	Macaca_fascicularis
ENSSDUG00000012514	xpot	99	80.125	ENSMMUG00000007659	XPOT	99	80.125	Macaca_mulatta
ENSSDUG00000012514	xpot	96	65.152	ENSMMUG00000021196	-	99	65.971	Macaca_mulatta
ENSSDUG00000012514	xpot	99	80.229	ENSMNEG00000033875	XPOT	99	80.229	Macaca_nemestrina
ENSSDUG00000012514	xpot	99	58.854	ENSMNEG00000029730	-	99	58.854	Macaca_nemestrina
ENSSDUG00000012514	xpot	99	76.899	ENSMLEG00000043977	XPOT	99	76.899	Mandrillus_leucophaeus
ENSSDUG00000012514	xpot	100	96.189	ENSMAMG00000020690	xpot	100	96.189	Mastacembelus_armatus
ENSSDUG00000012514	xpot	100	94.439	ENSMZEG00005018955	xpot	100	94.439	Maylandia_zebra
ENSSDUG00000012514	xpot	99	80.457	ENSMGAG00000010208	XPOT	99	80.457	Meleagris_gallopavo
ENSSDUG00000012514	xpot	99	77.140	ENSMAUG00000016836	Xpot	99	77.140	Mesocricetus_auratus
ENSSDUG00000012514	xpot	99	80.021	ENSMICG00000012001	XPOT	99	80.021	Microcebus_murinus
ENSSDUG00000012514	xpot	99	78.482	ENSMOCG00000014097	Xpot	99	78.482	Microtus_ochrogaster
ENSSDUG00000012514	xpot	99	92.105	ENSMMOG00000005960	xpot	100	92.105	Mola_mola
ENSSDUG00000012514	xpot	100	94.954	ENSMALG00000007523	xpot	100	94.954	Monopterus_albus
ENSSDUG00000012514	xpot	99	79.396	MGP_CAROLIEiJ_G0015858	Xpot	99	79.396	Mus_caroli
ENSSDUG00000012514	xpot	99	79.396	ENSMUSG00000034667	Xpot	99	79.396	Mus_musculus
ENSSDUG00000012514	xpot	99	78.690	MGP_PahariEiJ_G0031228	Xpot	99	78.690	Mus_pahari
ENSSDUG00000012514	xpot	99	77.235	MGP_SPRETEiJ_G0016683	Xpot	99	77.235	Mus_spretus
ENSSDUG00000012514	xpot	99	80.333	ENSMPUG00000017529	XPOT	99	80.333	Mustela_putorius_furo
ENSSDUG00000012514	xpot	99	80.021	ENSMLUG00000009664	XPOT	99	80.021	Myotis_lucifugus
ENSSDUG00000012514	xpot	98	80.398	ENSNGAG00000020615	Xpot	99	80.398	Nannospalax_galili
ENSSDUG00000012514	xpot	100	94.748	ENSNBRG00000017136	xpot	100	94.748	Neolamprologus_brichardi
ENSSDUG00000012514	xpot	99	80.125	ENSNLEG00000017052	XPOT	99	80.125	Nomascus_leucogenys
ENSSDUG00000012514	xpot	70	68.796	ENSMEUG00000016032	-	76	68.796	Notamacropus_eugenii
ENSSDUG00000012514	xpot	73	87.143	ENSOPRG00000013079	XPOT	72	87.143	Ochotona_princeps
ENSSDUG00000012514	xpot	98	79.665	ENSODEG00000004607	XPOT	99	79.665	Octodon_degus
ENSSDUG00000012514	xpot	100	95.057	ENSONIG00000007471	xpot	100	95.057	Oreochromis_niloticus
ENSSDUG00000012514	xpot	99	80.853	ENSOANG00000010932	XPOT	99	80.853	Ornithorhynchus_anatinus
ENSSDUG00000012514	xpot	99	79.814	ENSOCUG00000012126	XPOT	96	79.814	Oryctolagus_cuniculus
ENSSDUG00000012514	xpot	100	90.123	ENSORLG00000020105	xpot	100	90.123	Oryzias_latipes
ENSSDUG00000012514	xpot	100	90.329	ENSORLG00020003770	xpot	100	90.329	Oryzias_latipes_hni
ENSSDUG00000012514	xpot	99	88.095	ENSORLG00015003002	xpot	100	88.095	Oryzias_latipes_hsok
ENSSDUG00000012514	xpot	99	87.578	ENSOMEG00000021300	xpot	100	87.578	Oryzias_melastigma
ENSSDUG00000012514	xpot	99	72.529	ENSOGAG00000004952	XPOT	99	72.529	Otolemur_garnettii
ENSSDUG00000012514	xpot	99	80.125	ENSOARG00000003504	XPOT	99	80.125	Ovis_aries
ENSSDUG00000012514	xpot	99	59.667	ENSPPAG00000040981	-	99	59.667	Pan_paniscus
ENSSDUG00000012514	xpot	99	80.125	ENSPPAG00000031361	XPOT	99	80.125	Pan_paniscus
ENSSDUG00000012514	xpot	82	67.419	ENSPPAG00000041601	-	94	66.329	Pan_paniscus
ENSSDUG00000012514	xpot	99	80.229	ENSPPRG00000005552	XPOT	99	80.229	Panthera_pardus
ENSSDUG00000012514	xpot	99	80.104	ENSPTIG00000022072	XPOT	97	80.104	Panthera_tigris_altaica
ENSSDUG00000012514	xpot	99	59.044	ENSPTRG00000049416	-	99	59.044	Pan_troglodytes
ENSSDUG00000012514	xpot	99	59.148	ENSPTRG00000046749	-	99	59.148	Pan_troglodytes
ENSSDUG00000012514	xpot	99	80.125	ENSPTRG00000005173	XPOT	99	80.125	Pan_troglodytes
ENSSDUG00000012514	xpot	82	68.805	ENSPTRG00000045368	-	84	68.805	Pan_troglodytes
ENSSDUG00000012514	xpot	99	80.125	ENSPANG00000001024	-	99	80.125	Papio_anubis
ENSSDUG00000012514	xpot	99	77.627	ENSPANG00000030915	-	99	77.627	Papio_anubis
ENSSDUG00000012514	xpot	99	86.694	ENSPKIG00000001935	xpot	100	86.694	Paramormyrops_kingsleyae
ENSSDUG00000012514	xpot	99	80.333	ENSPSIG00000007346	XPOT	99	80.333	Pelodiscus_sinensis
ENSSDUG00000012514	xpot	58	93.993	ENSPMGG00000016668	xpot	92	93.993	Periophthalmus_magnuspinnatus
ENSSDUG00000012514	xpot	99	78.980	ENSPEMG00000002538	Xpot	99	78.980	Peromyscus_maniculatus_bairdii
ENSSDUG00000012514	xpot	99	80.229	ENSPCIG00000029686	XPOT	99	80.321	Phascolarctos_cinereus
ENSSDUG00000012514	xpot	100	92.997	ENSPFOG00000002834	xpot	100	92.997	Poecilia_formosa
ENSSDUG00000012514	xpot	100	92.997	ENSPLAG00000017684	xpot	100	92.997	Poecilia_latipinna
ENSSDUG00000012514	xpot	100	93.203	ENSPMEG00000006259	xpot	100	93.203	Poecilia_mexicana
ENSSDUG00000012514	xpot	99	90.103	ENSPREG00000018505	xpot	100	90.103	Poecilia_reticulata
ENSSDUG00000012514	xpot	99	80.125	ENSPPYG00000004727	XPOT	99	80.125	Pongo_abelii
ENSSDUG00000012514	xpot	87	73.620	ENSPCAG00000001574	XPOT	88	73.620	Procavia_capensis
ENSSDUG00000012514	xpot	99	79.482	ENSPCOG00000028383	XPOT	99	79.482	Propithecus_coquereli
ENSSDUG00000012514	xpot	99	79.917	ENSPVAG00000008199	XPOT	99	79.917	Pteropus_vampyrus
ENSSDUG00000012514	xpot	100	94.748	ENSPNYG00000022747	xpot	100	94.748	Pundamilia_nyererei
ENSSDUG00000012514	xpot	100	89.198	ENSPNAG00000009140	xpot	100	89.198	Pygocentrus_nattereri
ENSSDUG00000012514	xpot	68	75.000	ENSRNOG00000007088	Xpot	92	75.000	Rattus_norvegicus
ENSSDUG00000012514	xpot	99	64.004	ENSRBIG00000032079	-	99	64.004	Rhinopithecus_bieti
ENSSDUG00000012514	xpot	99	80.125	ENSRBIG00000041353	XPOT	99	80.125	Rhinopithecus_bieti
ENSSDUG00000012514	xpot	99	80.125	ENSRROG00000038276	XPOT	99	80.125	Rhinopithecus_roxellana
ENSSDUG00000012514	xpot	99	80.125	ENSSBOG00000024782	XPOT	99	80.125	Saimiri_boliviensis_boliviensis
ENSSDUG00000012514	xpot	99	80.229	ENSSHAG00000007043	XPOT	99	80.229	Sarcophilus_harrisii
ENSSDUG00000012514	xpot	99	85.151	ENSSFOG00015000827	xpot	100	85.151	Scleropages_formosus
ENSSDUG00000012514	xpot	100	93.924	ENSSMAG00000005164	xpot	100	93.924	Scophthalmus_maximus
ENSSDUG00000012514	xpot	100	99.897	ENSSLDG00000019497	xpot	100	99.897	Seriola_lalandi_dorsalis
ENSSDUG00000012514	xpot	75	81.649	ENSSARG00000005789	XPOT	88	74.427	Sorex_araneus
ENSSDUG00000012514	xpot	99	79.482	ENSSPUG00000009837	XPOT	99	79.482	Sphenodon_punctatus
ENSSDUG00000012514	xpot	99	80.125	ENSSSCG00000000466	XPOT	99	80.125	Sus_scrofa
ENSSDUG00000012514	xpot	99	80.333	ENSTGUG00000006459	XPOT	99	80.333	Taeniopygia_guttata
ENSSDUG00000012514	xpot	99	87.190	ENSTNIG00000002483	xpot	100	87.190	Tetraodon_nigroviridis
ENSSDUG00000012514	xpot	89	78.788	ENSTBEG00000009738	XPOT	90	78.788	Tupaia_belangeri
ENSSDUG00000012514	xpot	99	80.125	ENSTTRG00000016808	XPOT	99	80.125	Tursiops_truncatus
ENSSDUG00000012514	xpot	99	80.125	ENSUAMG00000017168	XPOT	99	80.125	Ursus_americanus
ENSSDUG00000012514	xpot	99	80.125	ENSUMAG00000020382	XPOT	99	80.125	Ursus_maritimus
ENSSDUG00000012514	xpot	98	79.769	ENSVPAG00000004244	XPOT	100	79.769	Vicugna_pacos
ENSSDUG00000012514	xpot	99	80.333	ENSVVUG00000015001	XPOT	100	80.042	Vulpes_vulpes
ENSSDUG00000012514	xpot	99	77.282	ENSXETG00000021668	xpot	99	77.282	Xenopus_tropicalis
ENSSDUG00000012514	xpot	99	88.958	ENSXCOG00000011945	xpot	100	88.958	Xiphophorus_couchianus
ENSSDUG00000012514	xpot	100	92.791	ENSXMAG00000002827	xpot	100	92.791	Xiphophorus_maculatus