EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000012538 (Gene tree)
Gene ID: 111218846
Gene Symbol: pnkd
Alias: im:7147352
Full Name: probable hydrolase PNKD
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 11424 bases
Position: chrBDQW01000052.1:6479826-6491249
Accession: 111218846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017153	Lactamase_B	PF00753.27	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017466	-	3526	XM_022741321	ENSSDUP00000017153	359 (aa)	XP_022597042	UPI000BBED394

Gene Model

Click here to download ENSSDUG00000012538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000012538	pnkd	74	35.448	ENSSDUG00000008388	hagh	83	35.448
ENSSDUG00000012538	pnkd	63	43.421	ENSSDUG00000008417	HAGHL	93	40.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012538	pnkd	91	60.615	ENSG00000127838	PNKD	94	61.765	Homo_sapiens
ENSSDUG00000012538	pnkd	100	93.315	ENSAPOG00000019072	pnkd	100	93.315	Acanthochromis_polyacanthus
ENSSDUG00000012538	pnkd	85	62.418	ENSAMEG00000003089	PNKD	79	62.418	Ailuropoda_melanoleuca
ENSSDUG00000012538	pnkd	85	93.464	ENSACIG00000015359	pnkd	84	93.464	Amphilophus_citrinellus
ENSSDUG00000012538	pnkd	84	94.040	ENSAOCG00000024159	pnkd	92	94.040	Amphiprion_ocellaris
ENSSDUG00000012538	pnkd	100	94.708	ENSAOCG00000011458	-	100	94.708	Amphiprion_ocellaris
ENSSDUG00000012538	pnkd	100	94.708	ENSAPEG00000011710	pnkd	100	94.708	Amphiprion_percula
ENSSDUG00000012538	pnkd	98	92.635	ENSATEG00000002727	pnkd	100	92.635	Anabas_testudineus
ENSSDUG00000012538	pnkd	89	63.551	ENSACAG00000001617	PNKD	97	60.114	Anolis_carolinensis
ENSSDUG00000012538	pnkd	89	61.635	ENSANAG00000019661	PNKD	100	61.635	Aotus_nancymaae
ENSSDUG00000012538	pnkd	100	89.415	ENSACLG00000021665	pnkd	100	89.415	Astatotilapia_calliptera
ENSSDUG00000012538	pnkd	100	71.547	ENSAMXG00000043305	pnkd	100	71.547	Astyanax_mexicanus
ENSSDUG00000012538	pnkd	91	61.538	ENSBTAG00000003936	PNKD	90	61.538	Bos_taurus
ENSSDUG00000012538	pnkd	89	61.442	ENSCJAG00000010820	PNKD	94	62.092	Callithrix_jacchus
ENSSDUG00000012538	pnkd	85	60.131	ENSCAFG00000014632	PNKD	79	60.131	Canis_familiaris
ENSSDUG00000012538	pnkd	89	61.442	ENSCAFG00020027093	PNKD	90	60.923	Canis_lupus_dingo
ENSSDUG00000012538	pnkd	85	62.745	ENSCHIG00000002862	PNKD	79	62.745	Capra_hircus
ENSSDUG00000012538	pnkd	89	60.125	ENSTSYG00000034863	PNKD	99	60.125	Carlito_syrichta
ENSSDUG00000012538	pnkd	99	56.022	ENSCPOG00000020589	PNKD	89	61.129	Cavia_porcellus
ENSSDUG00000012538	pnkd	89	61.442	ENSCCAG00000036713	PNKD	100	57.064	Cebus_capucinus
ENSSDUG00000012538	pnkd	91	60.615	ENSCATG00000041188	PNKD	94	61.765	Cercocebus_atys
ENSSDUG00000012538	pnkd	99	56.303	ENSCLAG00000012048	PNKD	89	61.442	Chinchilla_lanigera
ENSSDUG00000012538	pnkd	85	61.765	ENSCSAG00000008892	PNKD	79	61.765	Chlorocebus_sabaeus
ENSSDUG00000012538	pnkd	91	60.615	ENSCANG00000032283	PNKD	98	57.880	Colobus_angolensis_palliatus
ENSSDUG00000012538	pnkd	99	55.742	ENSCGRG00001024071	Pnkd	89	60.815	Cricetulus_griseus_chok1gshd
ENSSDUG00000012538	pnkd	99	55.742	ENSCGRG00000005443	Pnkd	89	60.815	Cricetulus_griseus_crigri
ENSSDUG00000012538	pnkd	99	86.555	ENSCSEG00000013958	pnkd	99	86.555	Cynoglossus_semilaevis
ENSSDUG00000012538	pnkd	100	88.579	ENSCVAG00000005723	pnkd	100	88.579	Cyprinodon_variegatus
ENSSDUG00000012538	pnkd	100	70.637	ENSDARG00000071032	pnkd	100	70.637	Danio_rerio
ENSSDUG00000012538	pnkd	88	62.658	ENSDNOG00000046154	PNKD	80	61.920	Dasypus_novemcinctus
ENSSDUG00000012538	pnkd	88	59.502	ENSDORG00000016109	Pnkd	83	59.813	Dipodomys_ordii
ENSSDUG00000012538	pnkd	85	46.774	ENSETEG00000014587	PNKD	80	46.774	Echinops_telfairi
ENSSDUG00000012538	pnkd	87	56.869	ENSEBUG00000013857	pnkd	99	56.869	Eptatretus_burgeri
ENSSDUG00000012538	pnkd	91	60.615	ENSEASG00005012391	PNKD	90	60.615	Equus_asinus_asinus
ENSSDUG00000012538	pnkd	91	60.615	ENSECAG00000013322	PNKD	84	60.615	Equus_caballus
ENSSDUG00000012538	pnkd	100	83.844	ENSELUG00000015007	pnkd	94	83.844	Esox_lucius
ENSSDUG00000012538	pnkd	91	61.538	ENSFCAG00000002373	PNKD	100	57.618	Felis_catus
ENSSDUG00000012538	pnkd	86	63.961	ENSFALG00000004028	PNKD	99	60.896	Ficedula_albicollis
ENSSDUG00000012538	pnkd	89	61.006	ENSFDAG00000012326	PNKD	100	61.006	Fukomys_damarensis
ENSSDUG00000012538	pnkd	100	88.022	ENSFHEG00000010999	pnkd	97	88.022	Fundulus_heteroclitus
ENSSDUG00000012538	pnkd	100	76.323	ENSGMOG00000009565	pnkd	100	76.323	Gadus_morhua
ENSSDUG00000012538	pnkd	86	60.968	ENSGALG00000022166	PNKD	99	60.968	Gallus_gallus
ENSSDUG00000012538	pnkd	93	89.189	ENSGAFG00000013942	pnkd	83	89.189	Gambusia_affinis
ENSSDUG00000012538	pnkd	100	85.237	ENSGACG00000007119	pnkd	100	85.237	Gasterosteus_aculeatus
ENSSDUG00000012538	pnkd	88	65.190	ENSGAGG00000017234	PNKD	99	65.190	Gopherus_agassizii
ENSSDUG00000012538	pnkd	91	60.615	ENSGGOG00000006892	PNKD	98	57.880	Gorilla_gorilla
ENSSDUG00000012538	pnkd	100	89.415	ENSHBUG00000001234	pnkd	100	89.415	Haplochromis_burtoni
ENSSDUG00000012538	pnkd	91	60.615	ENSHGLG00000013971	PNKD	93	59.412	Heterocephalus_glaber_female
ENSSDUG00000012538	pnkd	85	61.765	ENSHGLG00100005225	PNKD	79	61.765	Heterocephalus_glaber_male
ENSSDUG00000012538	pnkd	100	82.451	ENSHCOG00000018894	pnkd	100	82.451	Hippocampus_comes
ENSSDUG00000012538	pnkd	100	70.166	ENSIPUG00000013907	pnkd	99	75.244	Ictalurus_punctatus
ENSSDUG00000012538	pnkd	99	56.022	ENSSTOG00000024593	PNKD	97	57.880	Ictidomys_tridecemlineatus
ENSSDUG00000012538	pnkd	99	56.022	ENSJJAG00000023559	Pnkd	83	59.875	Jaculus_jaculus
ENSSDUG00000012538	pnkd	100	89.415	ENSKMAG00000014879	pnkd	100	89.415	Kryptolebias_marmoratus
ENSSDUG00000012538	pnkd	100	87.187	ENSLBEG00000000985	pnkd	100	87.187	Labrus_bergylta
ENSSDUG00000012538	pnkd	100	74.444	ENSLOCG00000000821	pnkd	100	74.444	Lepisosteus_oculatus
ENSSDUG00000012538	pnkd	85	60.784	ENSLAFG00000007427	PNKD	73	60.784	Loxodonta_africana
ENSSDUG00000012538	pnkd	91	60.615	ENSMFAG00000038281	PNKD	94	61.765	Macaca_fascicularis
ENSSDUG00000012538	pnkd	50	63.536	ENSMMUG00000022819	-	100	63.536	Macaca_mulatta
ENSSDUG00000012538	pnkd	91	60.615	ENSMNEG00000041541	PNKD	97	61.765	Macaca_nemestrina
ENSSDUG00000012538	pnkd	85	61.765	ENSMLEG00000042812	PNKD	94	61.765	Mandrillus_leucophaeus
ENSSDUG00000012538	pnkd	100	91.922	ENSMAMG00000017212	pnkd	100	91.922	Mastacembelus_armatus
ENSSDUG00000012538	pnkd	82	90.847	ENSMZEG00005012514	pnkd	100	90.847	Maylandia_zebra
ENSSDUG00000012538	pnkd	89	60.815	ENSMAUG00000013099	Pnkd	90	60.000	Mesocricetus_auratus
ENSSDUG00000012538	pnkd	100	57.660	ENSMICG00000042547	PNKD	100	57.660	Microcebus_murinus
ENSSDUG00000012538	pnkd	89	60.815	ENSMOCG00000007956	Pnkd	89	60.815	Microtus_ochrogaster
ENSSDUG00000012538	pnkd	86	87.702	ENSMMOG00000005679	pnkd	89	87.702	Mola_mola
ENSSDUG00000012538	pnkd	85	63.399	ENSMODG00000015497	PNKD	85	63.399	Monodelphis_domestica
ENSSDUG00000012538	pnkd	100	92.201	ENSMALG00000005967	pnkd	90	92.201	Monopterus_albus
ENSSDUG00000012538	pnkd	89	61.129	MGP_CAROLIEiJ_G0014258	Pnkd	100	56.389	Mus_caroli
ENSSDUG00000012538	pnkd	89	61.129	ENSMUSG00000026179	Pnkd	100	56.474	Mus_musculus
ENSSDUG00000012538	pnkd	89	61.129	MGP_PahariEiJ_G0027496	Pnkd	100	56.389	Mus_pahari
ENSSDUG00000012538	pnkd	89	61.129	MGP_SPRETEiJ_G0015064	Pnkd	100	56.389	Mus_spretus
ENSSDUG00000012538	pnkd	91	61.231	ENSMPUG00000016531	PNKD	90	61.231	Mustela_putorius_furo
ENSSDUG00000012538	pnkd	85	61.765	ENSMLUG00000004125	PNKD	100	61.765	Myotis_lucifugus
ENSSDUG00000012538	pnkd	99	55.742	ENSNGAG00000014980	Pnkd	90	60.308	Nannospalax_galili
ENSSDUG00000012538	pnkd	86	90.260	ENSNBRG00000020031	pnkd	95	90.260	Neolamprologus_brichardi
ENSSDUG00000012538	pnkd	84	62.458	ENSMEUG00000011266	PNKD	80	62.458	Notamacropus_eugenii
ENSSDUG00000012538	pnkd	91	60.923	ENSODEG00000009734	PNKD	90	60.923	Octodon_degus
ENSSDUG00000012538	pnkd	100	89.694	ENSONIG00000004389	pnkd	100	89.694	Oreochromis_niloticus
ENSSDUG00000012538	pnkd	99	55.742	ENSOCUG00000023754	PNKD	84	55.742	Oryctolagus_cuniculus
ENSSDUG00000012538	pnkd	100	83.008	ENSORLG00000026276	pnkd	99	83.008	Oryzias_latipes
ENSSDUG00000012538	pnkd	100	83.008	ENSORLG00020008373	pnkd	98	86.275	Oryzias_latipes_hni
ENSSDUG00000012538	pnkd	100	82.451	ENSORLG00015005276	pnkd	99	82.451	Oryzias_latipes_hsok
ENSSDUG00000012538	pnkd	100	83.565	ENSOMEG00000016106	pnkd	100	83.565	Oryzias_melastigma
ENSSDUG00000012538	pnkd	85	61.765	ENSOGAG00000001792	PNKD	100	61.765	Otolemur_garnettii
ENSSDUG00000012538	pnkd	85	62.745	ENSOARG00000019505	PNKD	79	62.745	Ovis_aries
ENSSDUG00000012538	pnkd	91	60.615	ENSPPAG00000034969	PNKD	94	61.765	Pan_paniscus
ENSSDUG00000012538	pnkd	91	61.538	ENSPPRG00000023720	PNKD	90	61.538	Panthera_pardus
ENSSDUG00000012538	pnkd	85	54.902	ENSPTIG00000021040	PNKD	79	54.902	Panthera_tigris_altaica
ENSSDUG00000012538	pnkd	91	60.615	ENSPTRG00000012914	PNKD	94	61.765	Pan_troglodytes
ENSSDUG00000012538	pnkd	91	60.615	ENSPANG00000005752	PNKD	94	61.765	Papio_anubis
ENSSDUG00000012538	pnkd	100	71.944	ENSPKIG00000011208	pnkd	100	76.415	Paramormyrops_kingsleyae
ENSSDUG00000012538	pnkd	85	84.641	ENSPMGG00000005169	pnkd	100	84.641	Periophthalmus_magnuspinnatus
ENSSDUG00000012538	pnkd	99	55.833	ENSPEMG00000010689	Pnkd	89	60.815	Peromyscus_maniculatus_bairdii
ENSSDUG00000012538	pnkd	85	58.824	ENSPMAG00000006947	pnkd	99	58.824	Petromyzon_marinus
ENSSDUG00000012538	pnkd	91	62.080	ENSPCIG00000021457	PNKD	93	61.062	Phascolarctos_cinereus
ENSSDUG00000012538	pnkd	100	86.908	ENSPFOG00000010628	pnkd	99	86.908	Poecilia_formosa
ENSSDUG00000012538	pnkd	74	84.470	ENSPLAG00000020583	pnkd	99	84.470	Poecilia_latipinna
ENSSDUG00000012538	pnkd	84	85.762	ENSPMEG00000006542	pnkd	77	85.762	Poecilia_mexicana
ENSSDUG00000012538	pnkd	100	85.237	ENSPREG00000014434	pnkd	99	85.237	Poecilia_reticulata
ENSSDUG00000012538	pnkd	85	61.765	ENSPPYG00000013167	PNKD	79	61.765	Pongo_abelii
ENSSDUG00000012538	pnkd	67	63.536	ENSPCAG00000003946	PNKD	62	63.536	Procavia_capensis
ENSSDUG00000012538	pnkd	100	58.056	ENSPCOG00000019839	PNKD	100	58.056	Propithecus_coquereli
ENSSDUG00000012538	pnkd	89	91.195	ENSPNYG00000016327	pnkd	100	91.195	Pundamilia_nyererei
ENSSDUG00000012538	pnkd	100	73.554	ENSPNAG00000008655	pnkd	100	73.554	Pygocentrus_nattereri
ENSSDUG00000012538	pnkd	89	60.502	ENSRNOG00000014806	Pnkd	100	57.621	Rattus_norvegicus
ENSSDUG00000012538	pnkd	91	60.615	ENSRBIG00000031614	PNKD	94	61.765	Rhinopithecus_bieti
ENSSDUG00000012538	pnkd	91	60.615	ENSRROG00000045542	PNKD	94	61.765	Rhinopithecus_roxellana
ENSSDUG00000012538	pnkd	89	61.442	ENSSBOG00000036000	PNKD	100	57.064	Saimiri_boliviensis_boliviensis
ENSSDUG00000012538	pnkd	87	62.975	ENSSHAG00000016339	PNKD	98	62.975	Sarcophilus_harrisii
ENSSDUG00000012538	pnkd	100	72.849	ENSSFOG00015013028	pnkd	100	72.849	Scleropages_formosus
ENSSDUG00000012538	pnkd	100	91.365	ENSSMAG00000006812	pnkd	100	91.365	Scophthalmus_maximus
ENSSDUG00000012538	pnkd	98	90.836	ENSSLDG00000021431	pnkd	100	90.836	Seriola_lalandi_dorsalis
ENSSDUG00000012538	pnkd	86	54.045	ENSSPUG00000018454	PNKD	99	54.045	Sphenodon_punctatus
ENSSDUG00000012538	pnkd	100	94.708	ENSSPAG00000007083	pnkd	100	94.708	Stegastes_partitus
ENSSDUG00000012538	pnkd	98	58.446	ENSSSCG00000029002	PNKD	97	62.092	Sus_scrofa
ENSSDUG00000012538	pnkd	100	86.908	ENSTRUG00000009399	pnkd	100	86.908	Takifugu_rubripes
ENSSDUG00000012538	pnkd	100	85.515	ENSTNIG00000010992	pnkd	100	85.515	Tetraodon_nigroviridis
ENSSDUG00000012538	pnkd	88	59.561	ENSTTRG00000012895	PNKD	83	59.561	Tursiops_truncatus
ENSSDUG00000012538	pnkd	91	61.231	ENSUAMG00000000289	PNKD	100	57.341	Ursus_americanus
ENSSDUG00000012538	pnkd	64	62.338	ENSUMAG00000019639	PNKD	63	62.338	Ursus_maritimus
ENSSDUG00000012538	pnkd	85	62.338	ENSVVUG00000007348	PNKD	79	61.765	Vulpes_vulpes
ENSSDUG00000012538	pnkd	87	67.846	ENSXETG00000014931	pnkd	99	67.846	Xenopus_tropicalis
ENSSDUG00000012538	pnkd	85	89.216	ENSXCOG00000014370	pnkd	94	89.216	Xiphophorus_couchianus