EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000012545 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA-binding protein 12B-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 1776 bases
Position: chrBDQW01000758.1:199587-201362
Accession: 111236925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017181	RRM_1	PF00076.22	3.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017494	-	1488	XM_022765843	ENSSDUP00000017181	495 (aa)	XP_022621564	-

Gene Model

Click here to download ENSSDUG00000012545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000012545	zgc:153215	98	30.291	ENSSDUG00000006856	rbm12b	74	30.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012545	zgc:153215	96	54.641	ENSAPOG00000008836	zgc:153215	95	54.008	Acanthochromis_polyacanthus
ENSSDUG00000012545	zgc:153215	98	31.569	ENSAPOG00000013963	rbm12b	74	31.349	Acanthochromis_polyacanthus
ENSSDUG00000012545	zgc:153215	87	34.538	ENSACIG00000014943	rbm12b	97	34.538	Amphilophus_citrinellus
ENSSDUG00000012545	zgc:153215	97	57.968	ENSACIG00000013317	zgc:153215	99	58.317	Amphilophus_citrinellus
ENSSDUG00000012545	zgc:153215	98	58.218	ENSAOCG00000010819	zgc:153215	99	57.988	Amphiprion_ocellaris
ENSSDUG00000012545	zgc:153215	98	34.335	ENSAPEG00000022079	rbm12b	66	33.333	Amphiprion_percula
ENSSDUG00000012545	zgc:153215	98	71.014	ENSATEG00000001886	zgc:153215	87	69.565	Anabas_testudineus
ENSSDUG00000012545	zgc:153215	98	32.207	ENSATEG00000004578	rbm12b	73	32.604	Anabas_testudineus
ENSSDUG00000012545	zgc:153215	99	59.923	ENSACLG00000007675	zgc:153215	100	59.923	Astatotilapia_calliptera
ENSSDUG00000012545	zgc:153215	88	52.688	ENSAMXG00000020853	zgc:153215	68	55.556	Astyanax_mexicanus
ENSSDUG00000012545	zgc:153215	76	54.907	ENSCSEG00000001575	-	99	54.111	Cynoglossus_semilaevis
ENSSDUG00000012545	zgc:153215	98	31.663	ENSCSEG00000004610	rbm12b	69	31.663	Cynoglossus_semilaevis
ENSSDUG00000012545	zgc:153215	98	53.738	ENSCVAG00000009259	-	99	51.869	Cyprinodon_variegatus
ENSSDUG00000012545	zgc:153215	98	31.028	ENSCVAG00000011047	rbm12b	77	31.349	Cyprinodon_variegatus
ENSSDUG00000012545	zgc:153215	98	39.171	ENSDARG00000055889	zgc:153215	99	39.171	Danio_rerio
ENSSDUG00000012545	zgc:153215	99	41.391	ENSELUG00000009039	zgc:153215	97	41.391	Esox_lucius
ENSSDUG00000012545	zgc:153215	97	52.486	ENSFHEG00000014539	zgc:153215	96	52.486	Fundulus_heteroclitus
ENSSDUG00000012545	zgc:153215	98	32.008	ENSGMOG00000013467	rbm12b	74	31.610	Gadus_morhua
ENSSDUG00000012545	zgc:153215	97	49.503	ENSGAFG00000007845	zgc:153215	98	49.503	Gambusia_affinis
ENSSDUG00000012545	zgc:153215	98	30.461	ENSGAFG00000007224	rbm12b	74	30.661	Gambusia_affinis
ENSSDUG00000012545	zgc:153215	98	31.138	ENSGACG00000008682	rbm12b	72	31.138	Gasterosteus_aculeatus
ENSSDUG00000012545	zgc:153215	99	54.498	ENSHBUG00000016150	zgc:153215	100	54.498	Haplochromis_burtoni
ENSSDUG00000012545	zgc:153215	98	36.280	ENSIPUG00000019731	zgc:153215	99	36.280	Ictalurus_punctatus
ENSSDUG00000012545	zgc:153215	99	30.315	ENSKMAG00000013704	rbm12b	72	30.315	Kryptolebias_marmoratus
ENSSDUG00000012545	zgc:153215	98	54.150	ENSKMAG00000004958	zgc:153215	99	54.150	Kryptolebias_marmoratus
ENSSDUG00000012545	zgc:153215	99	61.100	ENSLBEG00000002597	zgc:153215	99	60.282	Labrus_bergylta
ENSSDUG00000012545	zgc:153215	99	30.654	ENSLACG00000007177	RBM12B	74	30.654	Latimeria_chalumnae
ENSSDUG00000012545	zgc:153215	97	31.496	ENSLOCG00000018344	rbm12b	74	31.496	Lepisosteus_oculatus
ENSSDUG00000012545	zgc:153215	98	31.673	ENSMAMG00000011998	rbm12b	74	31.213	Mastacembelus_armatus
ENSSDUG00000012545	zgc:153215	99	57.394	ENSMAMG00000012038	zgc:153215	100	57.672	Mastacembelus_armatus
ENSSDUG00000012545	zgc:153215	99	54.325	ENSMZEG00005005435	zgc:153215	100	54.325	Maylandia_zebra
ENSSDUG00000012545	zgc:153215	97	62.000	ENSMMOG00000003372	zgc:153215	99	62.000	Mola_mola
ENSSDUG00000012545	zgc:153215	98	30.189	ENSMODG00000007436	RBM12B	65	30.189	Monodelphis_domestica
ENSSDUG00000012545	zgc:153215	99	64.417	ENSMALG00000001222	zgc:153215	99	64.417	Monopterus_albus
ENSSDUG00000012545	zgc:153215	98	30.661	ENSNBRG00000015057	rbm12b	74	30.661	Neolamprologus_brichardi
ENSSDUG00000012545	zgc:153215	99	55.190	ENSNBRG00000013644	zgc:153215	100	55.190	Neolamprologus_brichardi
ENSSDUG00000012545	zgc:153215	98	30.938	ENSONIG00000020612	rbm12b	74	30.938	Oreochromis_niloticus
ENSSDUG00000012545	zgc:153215	99	58.712	ENSONIG00000006054	zgc:153215	100	58.712	Oreochromis_niloticus
ENSSDUG00000012545	zgc:153215	99	46.869	ENSOMEG00000004220	zgc:153215	97	47.336	Oryzias_melastigma
ENSSDUG00000012545	zgc:153215	98	37.354	ENSPKIG00000014851	zgc:153215	99	37.354	Paramormyrops_kingsleyae
ENSSDUG00000012545	zgc:153215	99	31.445	ENSPKIG00000018719	rbm12b	73	31.445	Paramormyrops_kingsleyae
ENSSDUG00000012545	zgc:153215	99	30.902	ENSPFOG00000020937	rbm12b	73	30.273	Poecilia_formosa
ENSSDUG00000012545	zgc:153215	92	61.538	ENSPFOG00000017451	zgc:153215	67	70.000	Poecilia_formosa
ENSSDUG00000012545	zgc:153215	98	48.148	ENSPLAG00000000232	zgc:153215	99	48.148	Poecilia_latipinna
ENSSDUG00000012545	zgc:153215	99	31.094	ENSPLAG00000018782	rbm12b	74	30.461	Poecilia_latipinna
ENSSDUG00000012545	zgc:153215	99	30.902	ENSPMEG00000011418	rbm12b	74	30.461	Poecilia_mexicana
ENSSDUG00000012545	zgc:153215	98	49.383	ENSPMEG00000016662	zgc:153215	99	49.383	Poecilia_mexicana
ENSSDUG00000012545	zgc:153215	98	30.677	ENSPREG00000020770	rbm12b	74	31.076	Poecilia_reticulata
ENSSDUG00000012545	zgc:153215	99	49.901	ENSPREG00000018608	zgc:153215	100	49.503	Poecilia_reticulata
ENSSDUG00000012545	zgc:153215	98	53.292	ENSPNYG00000018125	zgc:153215	97	53.292	Pundamilia_nyererei
ENSSDUG00000012545	zgc:153215	98	37.209	ENSPNAG00000025628	zgc:153215	75	57.500	Pygocentrus_nattereri
ENSSDUG00000012545	zgc:153215	99	30.116	ENSPNAG00000008126	rbm12b	73	31.081	Pygocentrus_nattereri
ENSSDUG00000012545	zgc:153215	98	30.189	ENSSHAG00000015335	RBM12B	67	30.189	Sarcophilus_harrisii
ENSSDUG00000012545	zgc:153215	99	38.791	ENSSFOG00015009427	zgc:153215	99	38.791	Scleropages_formosus
ENSSDUG00000012545	zgc:153215	98	31.969	ENSSFOG00015001584	rbm12b	74	31.384	Scleropages_formosus
ENSSDUG00000012545	zgc:153215	98	31.388	ENSSMAG00000019708	rbm12b	74	31.187	Scophthalmus_maximus
ENSSDUG00000012545	zgc:153215	100	63.710	ENSSMAG00000019013	zgc:153215	98	63.074	Scophthalmus_maximus
ENSSDUG00000012545	zgc:153215	100	92.857	ENSSLDG00000013581	zgc:153215	88	92.857	Seriola_lalandi_dorsalis
ENSSDUG00000012545	zgc:153215	98	30.518	ENSSPUG00000016954	RBM12B	90	30.326	Sphenodon_punctatus
ENSSDUG00000012545	zgc:153215	99	50.699	ENSSPAG00000023584	zgc:153215	98	51.297	Stegastes_partitus
ENSSDUG00000012545	zgc:153215	98	30.862	ENSTRUG00000013738	rbm12b	74	31.944	Takifugu_rubripes
ENSSDUG00000012545	zgc:153215	77	52.882	ENSTNIG00000018374	-	99	50.608	Tetraodon_nigroviridis
ENSSDUG00000012545	zgc:153215	98	31.853	ENSXETG00000014694	rbm12b	99	31.048	Xenopus_tropicalis
ENSSDUG00000012545	zgc:153215	99	49.702	ENSXCOG00000019654	zgc:153215	99	49.702	Xiphophorus_couchianus
ENSSDUG00000012545	zgc:153215	98	30.039	ENSXMAG00000014213	rbm12b	74	30.400	Xiphophorus_maculatus
ENSSDUG00000012545	zgc:153215	84	53.571	ENSXMAG00000013169	-	95	53.571	Xiphophorus_maculatus