EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000012574 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 489 bases
Position: chrBDQW01000003.1:16897887-16898375
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017212	PARP	PF00644.20	6.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017527	-	489	-	ENSSDUP00000017212	162 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000012574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000012574	-	93	70.513	ENSSDUG00000006287	-	92	70.513
ENSSDUG00000012574	-	80	53.788	ENSSDUG00000018069	gig2p	62	53.788
ENSSDUG00000012574	-	90	50.676	ENSSDUG00000018079	-	88	50.676

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012574	-	91	71.429	ENSAPOG00000010161	-	91	71.429	Acanthochromis_polyacanthus
ENSSDUG00000012574	-	98	69.811	ENSACIG00000018444	-	98	69.811	Amphilophus_citrinellus
ENSSDUG00000012574	-	90	67.808	ENSAOCG00000010913	-	98	67.808	Amphiprion_ocellaris
ENSSDUG00000012574	-	90	67.808	ENSAOCG00000022001	-	98	67.808	Amphiprion_ocellaris
ENSSDUG00000012574	-	94	67.763	ENSAOCG00000022027	-	96	67.763	Amphiprion_ocellaris
ENSSDUG00000012574	-	86	68.345	ENSAPEG00000005698	-	81	68.345	Amphiprion_percula
ENSSDUG00000012574	-	90	67.808	ENSAPEG00000005732	-	98	67.808	Amphiprion_percula
ENSSDUG00000012574	-	94	67.763	ENSAPEG00000005707	-	98	67.763	Amphiprion_percula
ENSSDUG00000012574	-	90	74.667	ENSATEG00000019359	-	90	74.667	Anabas_testudineus
ENSSDUG00000012574	-	81	72.932	ENSACLG00000019059	-	96	72.932	Astatotilapia_calliptera
ENSSDUG00000012574	-	99	69.512	ENSCVAG00000014970	-	99	69.512	Cyprinodon_variegatus
ENSSDUG00000012574	-	85	72.464	ENSCVAG00000003747	-	95	72.464	Cyprinodon_variegatus
ENSSDUG00000012574	-	80	70.543	ENSCVAG00000003727	-	89	65.734	Cyprinodon_variegatus
ENSSDUG00000012574	-	73	57.143	ENSELUG00000017332	-	80	57.143	Esox_lucius
ENSSDUG00000012574	-	93	72.000	ENSFHEG00000017170	-	96	69.565	Fundulus_heteroclitus
ENSSDUG00000012574	-	99	67.702	ENSFHEG00000017157	-	98	67.702	Fundulus_heteroclitus
ENSSDUG00000012574	-	81	73.485	ENSFHEG00000017166	-	79	73.485	Fundulus_heteroclitus
ENSSDUG00000012574	-	85	66.667	ENSGMOG00000020063	-	99	66.667	Gadus_morhua
ENSSDUG00000012574	-	89	66.667	ENSGMOG00000019928	-	99	66.667	Gadus_morhua
ENSSDUG00000012574	-	74	69.048	ENSGMOG00000020583	-	100	69.048	Gadus_morhua
ENSSDUG00000012574	-	85	68.085	ENSGMOG00000020321	-	99	68.085	Gadus_morhua
ENSSDUG00000012574	-	89	67.568	ENSGMOG00000019914	-	99	67.568	Gadus_morhua
ENSSDUG00000012574	-	76	66.142	ENSGMOG00000020613	-	99	66.142	Gadus_morhua
ENSSDUG00000012574	-	89	68.243	ENSGMOG00000013817	-	99	68.243	Gadus_morhua
ENSSDUG00000012574	-	75	68.504	ENSGMOG00000020414	-	99	68.504	Gadus_morhua
ENSSDUG00000012574	-	74	73.333	ENSGAFG00000004666	-	100	73.333	Gambusia_affinis
ENSSDUG00000012574	-	94	66.013	ENSGAFG00000005347	-	95	66.013	Gambusia_affinis
ENSSDUG00000012574	-	90	69.079	ENSGACG00000014936	-	100	69.079	Gasterosteus_aculeatus
ENSSDUG00000012574	-	91	70.748	ENSHBUG00000018905	-	92	70.748	Haplochromis_burtoni
ENSSDUG00000012574	-	92	68.627	ENSHCOG00000006694	-	94	68.627	Hippocampus_comes
ENSSDUG00000012574	-	90	68.493	ENSKMAG00000004246	-	91	68.493	Kryptolebias_marmoratus
ENSSDUG00000012574	-	72	74.380	ENSLBEG00000007243	-	91	74.380	Labrus_bergylta
ENSSDUG00000012574	-	86	72.222	ENSLBEG00000010100	-	93	72.222	Labrus_bergylta
ENSSDUG00000012574	-	90	70.667	ENSLBEG00000010046	-	96	70.667	Labrus_bergylta
ENSSDUG00000012574	-	98	69.091	ENSLBEG00000010115	-	99	69.091	Labrus_bergylta
ENSSDUG00000012574	-	86	61.972	ENSLBEG00000007190	-	98	61.972	Labrus_bergylta
ENSSDUG00000012574	-	78	69.466	ENSLBEG00000007220	-	74	69.466	Labrus_bergylta
ENSSDUG00000012574	-	74	65.000	ENSLBEG00000007229	-	50	65.000	Labrus_bergylta
ENSSDUG00000012574	-	100	71.687	ENSMAMG00000019358	-	100	71.687	Mastacembelus_armatus
ENSSDUG00000012574	-	92	70.470	ENSMZEG00005002337	-	95	70.470	Maylandia_zebra
ENSSDUG00000012574	-	98	71.698	ENSMZEG00005002350	-	98	71.698	Maylandia_zebra
ENSSDUG00000012574	-	90	77.241	ENSMMOG00000020154	-	91	77.241	Mola_mola
ENSSDUG00000012574	-	91	74.830	ENSMMOG00000020157	-	99	74.830	Mola_mola
ENSSDUG00000012574	-	93	74.667	ENSMMOG00000020156	-	97	74.667	Mola_mola
ENSSDUG00000012574	-	75	72.800	ENSMALG00000021097	-	100	72.800	Monopterus_albus
ENSSDUG00000012574	-	76	65.854	ENSMALG00000014591	-	74	65.854	Monopterus_albus
ENSSDUG00000012574	-	97	68.153	ENSNBRG00000009099	-	93	68.153	Neolamprologus_brichardi
ENSSDUG00000012574	-	92	69.128	ENSNBRG00000009079	-	91	69.128	Neolamprologus_brichardi
ENSSDUG00000012574	-	98	71.698	ENSONIG00000009459	-	98	71.698	Oreochromis_niloticus
ENSSDUG00000012574	-	92	69.128	ENSONIG00000021378	-	99	69.128	Oreochromis_niloticus
ENSSDUG00000012574	-	87	65.248	ENSORLG00000001055	-	88	65.248	Oryzias_latipes
ENSSDUG00000012574	-	93	62.000	ENSORLG00020017394	-	52	62.000	Oryzias_latipes_hni
ENSSDUG00000012574	-	92	62.667	ENSOMEG00000015296	-	66	62.667	Oryzias_melastigma
ENSSDUG00000012574	-	93	63.576	ENSOMEG00000015284	-	94	63.576	Oryzias_melastigma
ENSSDUG00000012574	-	91	70.270	ENSPMGG00000017878	-	94	70.270	Periophthalmus_magnuspinnatus
ENSSDUG00000012574	-	91	67.568	ENSPMGG00000017877	-	90	67.568	Periophthalmus_magnuspinnatus
ENSSDUG00000012574	-	90	67.586	ENSPFOG00000020434	-	100	67.586	Poecilia_formosa
ENSSDUG00000012574	-	90	67.808	ENSPLAG00000020837	-	91	67.808	Poecilia_latipinna
ENSSDUG00000012574	-	92	65.772	ENSPLAG00000014302	-	94	65.772	Poecilia_latipinna
ENSSDUG00000012574	-	97	67.516	ENSPMEG00000011183	-	80	67.516	Poecilia_mexicana
ENSSDUG00000012574	-	92	65.772	ENSPREG00000013691	-	95	65.986	Poecilia_reticulata
ENSSDUG00000012574	-	100	69.939	ENSSMAG00000014601	-	99	69.939	Scophthalmus_maximus
ENSSDUG00000012574	-	85	73.381	ENSSMAG00000014710	-	92	72.185	Scophthalmus_maximus
ENSSDUG00000012574	-	79	68.750	ENSSMAG00000014637	-	89	68.750	Scophthalmus_maximus
ENSSDUG00000012574	-	94	69.620	ENSSLDG00000012388	-	92	69.620	Seriola_lalandi_dorsalis
ENSSDUG00000012574	-	93	93.333	ENSSLDG00000013905	-	92	93.333	Seriola_lalandi_dorsalis
ENSSDUG00000012574	-	98	67.683	ENSSPAG00000005387	-	93	67.683	Stegastes_partitus
ENSSDUG00000012574	-	89	70.139	ENSSPAG00000005395	-	96	70.139	Stegastes_partitus
ENSSDUG00000012574	-	82	68.421	ENSTRUG00000025007	-	86	68.421	Takifugu_rubripes
ENSSDUG00000012574	-	88	69.930	ENSTRUG00000020594	-	89	69.930	Takifugu_rubripes
ENSSDUG00000012574	-	87	68.085	ENSTRUG00000024239	-	99	68.085	Takifugu_rubripes
ENSSDUG00000012574	-	90	68.493	ENSTRUG00000023048	-	100	68.493	Takifugu_rubripes
ENSSDUG00000012574	-	90	68.707	ENSXCOG00000000142	-	91	68.707	Xiphophorus_couchianus
ENSSDUG00000012574	-	85	70.803	ENSXCOG00000018144	-	94	70.803	Xiphophorus_couchianus
ENSSDUG00000012574	-	81	72.519	ENSXMAG00000023121	-	89	72.519	Xiphophorus_maculatus
ENSSDUG00000012574	-	94	67.320	ENSXMAG00000019489	-	97	67.320	Xiphophorus_maculatus