EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012605 (Gene tree)
Gene ID: 111229477
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4342 bases
Position: chrBDQW01000236.1:770017-774358
Accession: 111229477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017272	RtcB	PF01139.17	4e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017587	-	1750	XM_022755810	ENSSDUP00000017272	505 (aa)	XP_022611531	UPI000BBEE0D4

Gene Model

Click here to download ENSSDUG00000012605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012605	rtcb	100	93.861	ENSG00000100220	RTCB	100	93.861	Homo_sapiens
ENSSDUG00000012605	rtcb	100	97.228	ENSAPOG00000006040	rtcb	100	97.228	Acanthochromis_polyacanthus
ENSSDUG00000012605	rtcb	100	93.861	ENSAMEG00000016152	RTCB	100	93.861	Ailuropoda_melanoleuca
ENSSDUG00000012605	rtcb	100	91.485	ENSACIG00000009083	rtcb	100	91.485	Amphilophus_citrinellus
ENSSDUG00000012605	rtcb	100	97.426	ENSAOCG00000005662	rtcb	100	97.609	Amphiprion_ocellaris
ENSSDUG00000012605	rtcb	96	92.402	ENSAPEG00000024653	rtcb	100	92.402	Amphiprion_percula
ENSSDUG00000012605	rtcb	100	97.426	ENSAPEG00000024701	rtcb	100	97.426	Amphiprion_percula
ENSSDUG00000012605	rtcb	100	97.624	ENSATEG00000000618	rtcb	100	97.624	Anabas_testudineus
ENSSDUG00000012605	rtcb	100	90.751	ENSACAG00000014817	RTCB	100	90.751	Anolis_carolinensis
ENSSDUG00000012605	rtcb	100	78.218	ENSANAG00000018191	-	91	78.218	Aotus_nancymaae
ENSSDUG00000012605	rtcb	72	97.222	ENSANAG00000023724	-	86	97.222	Aotus_nancymaae
ENSSDUG00000012605	rtcb	100	94.059	ENSACLG00000008367	rtcb	100	95.000	Astatotilapia_calliptera
ENSSDUG00000012605	rtcb	100	95.446	ENSAMXG00000042320	rtcb	100	95.446	Astyanax_mexicanus
ENSSDUG00000012605	rtcb	100	94.059	ENSBTAG00000011070	RTCB	100	94.059	Bos_taurus
ENSSDUG00000012605	rtcb	100	73.465	WBGene00008877	rtcb-1	100	73.465	Caenorhabditis_elegans
ENSSDUG00000012605	rtcb	100	93.663	ENSCJAG00000006128	RTCB	100	93.663	Callithrix_jacchus
ENSSDUG00000012605	rtcb	100	89.703	ENSCAFG00000010789	-	100	89.703	Canis_familiaris
ENSSDUG00000012605	rtcb	100	93.861	ENSCAFG00000001785	RTCB	100	93.861	Canis_familiaris
ENSSDUG00000012605	rtcb	100	93.861	ENSCAFG00020004890	-	100	93.861	Canis_lupus_dingo
ENSSDUG00000012605	rtcb	87	89.773	ENSCAFG00020018953	-	99	89.773	Canis_lupus_dingo
ENSSDUG00000012605	rtcb	100	94.059	ENSCHIG00000027009	-	100	94.059	Capra_hircus
ENSSDUG00000012605	rtcb	100	93.663	ENSTSYG00000012320	RTCB	100	93.663	Carlito_syrichta
ENSSDUG00000012605	rtcb	94	93.711	ENSCAPG00000011647	RTCB	96	93.711	Cavia_aperea
ENSSDUG00000012605	rtcb	100	93.663	ENSCCAG00000000618	RTCB	100	93.663	Cebus_capucinus
ENSSDUG00000012605	rtcb	100	93.663	ENSCATG00000033424	RTCB	100	93.663	Cercocebus_atys
ENSSDUG00000012605	rtcb	100	93.663	ENSCLAG00000007997	RTCB	100	93.663	Chinchilla_lanigera
ENSSDUG00000012605	rtcb	100	93.465	ENSCSAG00000008351	RTCB	100	93.465	Chlorocebus_sabaeus
ENSSDUG00000012605	rtcb	100	80.396	ENSCHOG00000009123	RTCB	100	80.396	Choloepus_hoffmanni
ENSSDUG00000012605	rtcb	100	93.069	ENSCPBG00000023184	RTCB	100	93.069	Chrysemys_picta_bellii
ENSSDUG00000012605	rtcb	100	82.574	ENSCING00000003830	-	100	82.574	Ciona_intestinalis
ENSSDUG00000012605	rtcb	100	82.772	ENSCSAVG00000008124	-	100	82.005	Ciona_savignyi
ENSSDUG00000012605	rtcb	100	89.901	ENSCANG00000001891	RTCB	100	89.901	Colobus_angolensis_palliatus
ENSSDUG00000012605	rtcb	100	93.861	ENSCGRG00001011173	Rtcb	100	93.861	Cricetulus_griseus_chok1gshd
ENSSDUG00000012605	rtcb	93	94.681	ENSCGRG00000009587	-	96	94.681	Cricetulus_griseus_crigri
ENSSDUG00000012605	rtcb	100	97.030	ENSCSEG00000003986	rtcb	100	97.030	Cynoglossus_semilaevis
ENSSDUG00000012605	rtcb	82	94.952	ENSCVAG00000000569	rtcb	95	94.952	Cyprinodon_variegatus
ENSSDUG00000012605	rtcb	100	96.040	ENSDARG00000101047	rtcb	100	96.040	Danio_rerio
ENSSDUG00000012605	rtcb	80	89.681	ENSDNOG00000012425	RTCB	99	89.681	Dasypus_novemcinctus
ENSSDUG00000012605	rtcb	100	93.861	ENSDORG00000010855	Rtcb	100	93.861	Dipodomys_ordii
ENSSDUG00000012605	rtcb	99	84.493	FBgn0032781	RtcB	99	84.493	Drosophila_melanogaster
ENSSDUG00000012605	rtcb	100	87.921	ENSETEG00000001988	RTCB	100	87.921	Echinops_telfairi
ENSSDUG00000012605	rtcb	100	85.149	ENSEBUG00000014235	rtcb	100	85.149	Eptatretus_burgeri
ENSSDUG00000012605	rtcb	100	94.059	ENSEASG00005019059	RTCB	100	94.059	Equus_asinus_asinus
ENSSDUG00000012605	rtcb	100	94.059	ENSECAG00000023998	RTCB	100	94.059	Equus_caballus
ENSSDUG00000012605	rtcb	89	85.235	ENSEEUG00000006251	RTCB	100	85.235	Erinaceus_europaeus
ENSSDUG00000012605	rtcb	100	82.987	ENSELUG00000009275	rtcb	100	82.987	Esox_lucius
ENSSDUG00000012605	rtcb	100	93.861	ENSFCAG00000026480	RTCB	100	93.861	Felis_catus
ENSSDUG00000012605	rtcb	100	94.455	ENSFALG00000013334	RTCB	100	94.455	Ficedula_albicollis
ENSSDUG00000012605	rtcb	100	93.663	ENSFDAG00000018150	RTCB	100	93.663	Fukomys_damarensis
ENSSDUG00000012605	rtcb	100	96.238	ENSFHEG00000009595	rtcb	100	96.238	Fundulus_heteroclitus
ENSSDUG00000012605	rtcb	100	92.871	ENSGMOG00000018882	rtcb	100	92.871	Gadus_morhua
ENSSDUG00000012605	rtcb	100	94.059	ENSGALG00000012611	RTCB	100	94.059	Gallus_gallus
ENSSDUG00000012605	rtcb	100	95.842	ENSGAFG00000004198	rtcb	100	95.842	Gambusia_affinis
ENSSDUG00000012605	rtcb	100	96.040	ENSGACG00000000586	rtcb	100	96.040	Gasterosteus_aculeatus
ENSSDUG00000012605	rtcb	93	92.128	ENSGAGG00000019133	RTCB	98	92.128	Gopherus_agassizii
ENSSDUG00000012605	rtcb	100	93.861	ENSGGOG00000011402	RTCB	100	93.861	Gorilla_gorilla
ENSSDUG00000012605	rtcb	100	94.059	ENSHBUG00000020571	rtcb	100	94.059	Haplochromis_burtoni
ENSSDUG00000012605	rtcb	100	93.663	ENSHGLG00000004492	RTCB	100	93.663	Heterocephalus_glaber_female
ENSSDUG00000012605	rtcb	93	67.591	ENSHGLG00000001066	-	99	67.591	Heterocephalus_glaber_female
ENSSDUG00000012605	rtcb	100	93.663	ENSHGLG00100008965	RTCB	100	93.663	Heterocephalus_glaber_male
ENSSDUG00000012605	rtcb	100	93.886	ENSHCOG00000006450	rtcb	100	93.886	Hippocampus_comes
ENSSDUG00000012605	rtcb	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSSDUG00000012605	rtcb	100	93.663	ENSSTOG00000003878	RTCB	100	93.663	Ictidomys_tridecemlineatus
ENSSDUG00000012605	rtcb	100	93.861	ENSJJAG00000010667	Rtcb	100	93.861	Jaculus_jaculus
ENSSDUG00000012605	rtcb	100	96.436	ENSKMAG00000013178	rtcb	100	96.436	Kryptolebias_marmoratus
ENSSDUG00000012605	rtcb	100	97.030	ENSLBEG00000010566	RTCB	100	97.030	Labrus_bergylta
ENSSDUG00000012605	rtcb	100	96.040	ENSLBEG00000000214	rtcb	100	96.040	Labrus_bergylta
ENSSDUG00000012605	rtcb	100	93.861	ENSLACG00000013033	RTCB	100	93.861	Latimeria_chalumnae
ENSSDUG00000012605	rtcb	100	95.248	ENSLOCG00000016515	rtcb	99	95.248	Lepisosteus_oculatus
ENSSDUG00000012605	rtcb	100	93.267	ENSLAFG00000002082	RTCB	100	93.267	Loxodonta_africana
ENSSDUG00000012605	rtcb	100	93.465	ENSMFAG00000034419	RTCB	100	93.465	Macaca_fascicularis
ENSSDUG00000012605	rtcb	100	93.465	ENSMMUG00000006720	RTCB	100	93.465	Macaca_mulatta
ENSSDUG00000012605	rtcb	100	93.465	ENSMNEG00000040669	RTCB	100	93.465	Macaca_nemestrina
ENSSDUG00000012605	rtcb	100	93.663	ENSMLEG00000040505	RTCB	100	93.663	Mandrillus_leucophaeus
ENSSDUG00000012605	rtcb	100	97.426	ENSMAMG00000020676	rtcb	100	97.426	Mastacembelus_armatus
ENSSDUG00000012605	rtcb	100	94.059	ENSMZEG00005018942	rtcb	100	94.059	Maylandia_zebra
ENSSDUG00000012605	rtcb	100	93.688	ENSMGAG00000012805	RTCB	100	93.688	Meleagris_gallopavo
ENSSDUG00000012605	rtcb	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSSDUG00000012605	rtcb	100	93.663	ENSMICG00000013303	-	100	93.663	Microcebus_murinus
ENSSDUG00000012605	rtcb	100	74.851	ENSMICG00000036677	-	100	74.851	Microcebus_murinus
ENSSDUG00000012605	rtcb	100	94.257	ENSMOCG00000002440	Rtcb	100	94.257	Microtus_ochrogaster
ENSSDUG00000012605	rtcb	100	96.436	ENSMMOG00000005987	rtcb	100	96.436	Mola_mola
ENSSDUG00000012605	rtcb	100	94.059	ENSMODG00000001414	RTCB	100	94.059	Monodelphis_domestica
ENSSDUG00000012605	rtcb	100	97.228	ENSMALG00000007603	rtcb	100	97.228	Monopterus_albus
ENSSDUG00000012605	rtcb	100	93.861	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.861	Mus_caroli
ENSSDUG00000012605	rtcb	100	93.861	ENSMUSG00000001783	Rtcb	100	93.861	Mus_musculus
ENSSDUG00000012605	rtcb	100	93.861	MGP_PahariEiJ_G0031396	Rtcb	100	93.861	Mus_pahari
ENSSDUG00000012605	rtcb	100	93.861	MGP_SPRETEiJ_G0016507	Rtcb	100	93.861	Mus_spretus
ENSSDUG00000012605	rtcb	100	93.861	ENSMPUG00000012285	RTCB	100	93.861	Mustela_putorius_furo
ENSSDUG00000012605	rtcb	100	91.124	ENSMLUG00000007803	RTCB	100	91.124	Myotis_lucifugus
ENSSDUG00000012605	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSSDUG00000012605	rtcb	100	94.455	ENSNBRG00000017202	rtcb	100	94.455	Neolamprologus_brichardi
ENSSDUG00000012605	rtcb	100	93.861	ENSNLEG00000004960	RTCB	100	93.861	Nomascus_leucogenys
ENSSDUG00000012605	rtcb	100	70.891	ENSMEUG00000007809	-	100	70.891	Notamacropus_eugenii
ENSSDUG00000012605	rtcb	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSSDUG00000012605	rtcb	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSSDUG00000012605	rtcb	100	62.574	ENSODEG00000005042	-	100	62.574	Octodon_degus
ENSSDUG00000012605	rtcb	100	95.050	ENSONIG00000007474	rtcb	100	95.050	Oreochromis_niloticus
ENSSDUG00000012605	rtcb	100	93.663	ENSOANG00000005524	RTCB	100	93.663	Ornithorhynchus_anatinus
ENSSDUG00000012605	rtcb	93	93.404	ENSOCUG00000008270	RTCB	96	93.404	Oryctolagus_cuniculus
ENSSDUG00000012605	rtcb	100	95.248	ENSORLG00000020093	rtcb	100	95.248	Oryzias_latipes
ENSSDUG00000012605	rtcb	100	95.248	ENSORLG00020003706	rtcb	100	95.248	Oryzias_latipes_hni
ENSSDUG00000012605	rtcb	100	95.446	ENSORLG00015002968	rtcb	100	95.446	Oryzias_latipes_hsok
ENSSDUG00000012605	rtcb	100	95.050	ENSOMEG00000021278	rtcb	100	95.050	Oryzias_melastigma
ENSSDUG00000012605	rtcb	100	93.069	ENSOGAG00000001425	RTCB	100	93.069	Otolemur_garnettii
ENSSDUG00000012605	rtcb	100	94.059	ENSOARG00000018008	RTCB	100	94.059	Ovis_aries
ENSSDUG00000012605	rtcb	100	93.861	ENSPPAG00000028667	RTCB	100	93.861	Pan_paniscus
ENSSDUG00000012605	rtcb	100	93.861	ENSPPRG00000004038	RTCB	100	93.861	Panthera_pardus
ENSSDUG00000012605	rtcb	94	89.684	ENSPTIG00000020499	RTCB	97	90.737	Panthera_tigris_altaica
ENSSDUG00000012605	rtcb	100	93.861	ENSPTRG00000014287	RTCB	100	93.861	Pan_troglodytes
ENSSDUG00000012605	rtcb	100	93.465	ENSPANG00000016035	RTCB	100	93.465	Papio_anubis
ENSSDUG00000012605	rtcb	100	94.653	ENSPKIG00000001881	rtcb	100	94.653	Paramormyrops_kingsleyae
ENSSDUG00000012605	rtcb	91	94.130	ENSPSIG00000011690	RTCB	100	94.130	Pelodiscus_sinensis
ENSSDUG00000012605	rtcb	100	97.030	ENSPMGG00000016672	rtcb	100	97.030	Periophthalmus_magnuspinnatus
ENSSDUG00000012605	rtcb	100	93.861	ENSPEMG00000019548	Rtcb	100	93.861	Peromyscus_maniculatus_bairdii
ENSSDUG00000012605	rtcb	100	91.089	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSSDUG00000012605	rtcb	100	94.059	ENSPCIG00000009467	RTCB	100	94.059	Phascolarctos_cinereus
ENSSDUG00000012605	rtcb	100	96.238	ENSPFOG00000003058	rtcb	100	96.238	Poecilia_formosa
ENSSDUG00000012605	rtcb	100	96.040	ENSPLAG00000017663	rtcb	100	96.040	Poecilia_latipinna
ENSSDUG00000012605	rtcb	100	96.238	ENSPMEG00000006227	rtcb	100	96.238	Poecilia_mexicana
ENSSDUG00000012605	rtcb	100	95.644	ENSPREG00000018467	rtcb	100	95.644	Poecilia_reticulata
ENSSDUG00000012605	rtcb	100	93.861	ENSPPYG00000011752	RTCB	100	93.861	Pongo_abelii
ENSSDUG00000012605	rtcb	93	76.695	ENSPCAG00000013641	RTCB	100	76.695	Procavia_capensis
ENSSDUG00000012605	rtcb	100	93.663	ENSPCOG00000017243	RTCB	100	93.663	Propithecus_coquereli
ENSSDUG00000012605	rtcb	93	92.553	ENSPVAG00000002380	RTCB	100	92.553	Pteropus_vampyrus
ENSSDUG00000012605	rtcb	100	94.059	ENSPNYG00000022760	rtcb	100	94.059	Pundamilia_nyererei
ENSSDUG00000012605	rtcb	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSSDUG00000012605	rtcb	100	93.861	ENSRNOG00000004813	Rtcb	100	93.861	Rattus_norvegicus
ENSSDUG00000012605	rtcb	100	85.968	ENSRBIG00000042090	RTCB	100	85.968	Rhinopithecus_bieti
ENSSDUG00000012605	rtcb	100	88.911	ENSSBOG00000020085	-	100	88.911	Saimiri_boliviensis_boliviensis
ENSSDUG00000012605	rtcb	94	94.515	ENSSHAG00000016277	RTCB	100	94.515	Sarcophilus_harrisii
ENSSDUG00000012605	rtcb	100	92.871	ENSSFOG00015011572	RTCB	100	92.871	Scleropages_formosus
ENSSDUG00000012605	rtcb	100	94.257	ENSSFOG00015000763	rtcb	100	94.257	Scleropages_formosus
ENSSDUG00000012605	rtcb	100	94.257	ENSSMAG00000005096	rtcb	100	94.257	Scophthalmus_maximus
ENSSDUG00000012605	rtcb	100	99.604	ENSSLDG00000019458	rtcb	100	99.604	Seriola_lalandi_dorsalis
ENSSDUG00000012605	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSSDUG00000012605	rtcb	100	92.871	ENSSPUG00000012814	RTCB	100	92.871	Sphenodon_punctatus
ENSSDUG00000012605	rtcb	100	97.426	ENSSPAG00000004623	rtcb	100	97.426	Stegastes_partitus
ENSSDUG00000012605	rtcb	100	93.861	ENSSSCG00000000158	RTCB	100	93.861	Sus_scrofa
ENSSDUG00000012605	rtcb	100	94.455	ENSTGUG00000010947	RTCB	99	94.455	Taeniopygia_guttata
ENSSDUG00000012605	rtcb	91	96.739	ENSTRUG00000009880	rtcb	100	96.739	Takifugu_rubripes
ENSSDUG00000012605	rtcb	100	94.455	ENSTNIG00000002484	rtcb	100	94.455	Tetraodon_nigroviridis
ENSSDUG00000012605	rtcb	100	80.990	ENSTBEG00000004418	RTCB	100	80.990	Tupaia_belangeri
ENSSDUG00000012605	rtcb	93	92.553	ENSTTRG00000006417	RTCB	100	92.553	Tursiops_truncatus
ENSSDUG00000012605	rtcb	100	93.861	ENSUAMG00000022792	RTCB	100	93.861	Ursus_americanus
ENSSDUG00000012605	rtcb	100	93.861	ENSUMAG00000017225	RTCB	100	93.861	Ursus_maritimus
ENSSDUG00000012605	rtcb	100	93.663	ENSVPAG00000005375	RTCB	100	93.663	Vicugna_pacos
ENSSDUG00000012605	rtcb	100	93.861	ENSVVUG00000023408	RTCB	100	94.349	Vulpes_vulpes
ENSSDUG00000012605	rtcb	100	93.465	ENSXETG00000011523	rtcb	100	93.465	Xenopus_tropicalis
ENSSDUG00000012605	rtcb	100	95.842	ENSXMAG00000002855	rtcb	100	95.842	Xiphophorus_maculatus