EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012740 (Gene tree)
Gene ID: 111235867
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 17027 bases
Position: chrBDQW01000538.1:1210659-1227685
Accession: 111235867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017419	TRM	PF02005.16	2.7e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000017738	-	5195	XM_022764435	ENSSDUP00000017419	670 (aa)	XP_022620156	UPI000BBE4661

Gene Model

Click here to download ENSSDUG00000012740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012740	trmt1	84	67.888	ENSG00000104907	TRMT1	100	75.000	Homo_sapiens
ENSSDUG00000012740	trmt1	84	66.783	ENSAMEG00000012598	TRMT1	85	66.958	Ailuropoda_melanoleuca
ENSSDUG00000012740	trmt1	92	80.389	ENSACIG00000018680	trmt1	97	80.389	Amphilophus_citrinellus
ENSSDUG00000012740	trmt1	100	86.119	ENSAOCG00000006781	trmt1	100	85.224	Amphiprion_ocellaris
ENSSDUG00000012740	trmt1	100	86.269	ENSAPEG00000007712	trmt1	100	85.373	Amphiprion_percula
ENSSDUG00000012740	trmt1	100	87.164	ENSATEG00000001872	trmt1	100	87.164	Anabas_testudineus
ENSSDUG00000012740	trmt1	85	67.414	ENSACAG00000003825	TRMT1	94	67.414	Anolis_carolinensis
ENSSDUG00000012740	trmt1	84	65.849	ENSANAG00000023016	TRMT1	92	65.849	Aotus_nancymaae
ENSSDUG00000012740	trmt1	92	85.065	ENSACLG00000010073	trmt1	98	86.265	Astatotilapia_calliptera
ENSSDUG00000012740	trmt1	93	76.415	ENSAMXG00000012026	trmt1	89	80.135	Astyanax_mexicanus
ENSSDUG00000012740	trmt1	86	66.214	ENSBTAG00000019325	TRMT1	83	66.214	Bos_taurus
ENSSDUG00000012740	trmt1	80	39.779	WBGene00006613	trm-1	96	39.779	Caenorhabditis_elegans
ENSSDUG00000012740	trmt1	84	64.921	ENSCJAG00000004566	TRMT1	88	64.921	Callithrix_jacchus
ENSSDUG00000012740	trmt1	84	67.657	ENSCAFG00000017070	TRMT1	90	67.657	Canis_familiaris
ENSSDUG00000012740	trmt1	84	67.719	ENSCAFG00020005397	TRMT1	88	67.719	Canis_lupus_dingo
ENSSDUG00000012740	trmt1	86	66.105	ENSCHIG00000013569	TRMT1	88	66.105	Capra_hircus
ENSSDUG00000012740	trmt1	84	65.149	ENSTSYG00000003207	TRMT1	87	65.149	Carlito_syrichta
ENSSDUG00000012740	trmt1	79	62.430	ENSCAPG00000003355	TRMT1	94	62.430	Cavia_aperea
ENSSDUG00000012740	trmt1	84	65.511	ENSCPOG00000011754	TRMT1	87	65.511	Cavia_porcellus
ENSSDUG00000012740	trmt1	84	64.098	ENSCCAG00000022263	TRMT1	92	64.098	Cebus_capucinus
ENSSDUG00000012740	trmt1	69	56.383	ENSCATG00000038220	-	85	56.383	Cercocebus_atys
ENSSDUG00000012740	trmt1	84	67.657	ENSCATG00000039850	TRMT1	86	67.657	Cercocebus_atys
ENSSDUG00000012740	trmt1	84	66.841	ENSCLAG00000015295	TRMT1	89	64.336	Chinchilla_lanigera
ENSSDUG00000012740	trmt1	70	70.947	ENSCSAG00000006500	TRMT1	89	70.947	Chlorocebus_sabaeus
ENSSDUG00000012740	trmt1	84	70.922	ENSCPBG00000023866	TRMT1	85	71.099	Chrysemys_picta_bellii
ENSSDUG00000012740	trmt1	81	48.446	ENSCING00000002884	-	97	48.446	Ciona_intestinalis
ENSSDUG00000012740	trmt1	80	51.107	ENSCSAVG00000010927	-	100	49.908	Ciona_savignyi
ENSSDUG00000012740	trmt1	84	53.310	ENSCANG00000040631	TRMT1	86	53.310	Colobus_angolensis_palliatus
ENSSDUG00000012740	trmt1	85	51.979	ENSCANG00000031650	-	91	51.979	Colobus_angolensis_palliatus
ENSSDUG00000012740	trmt1	86	65.292	ENSCGRG00001022594	Trmt1	89	65.292	Cricetulus_griseus_chok1gshd
ENSSDUG00000012740	trmt1	86	65.292	ENSCGRG00000017732	Trmt1	87	65.292	Cricetulus_griseus_crigri
ENSSDUG00000012740	trmt1	100	79.941	ENSCSEG00000001643	trmt1	99	80.656	Cynoglossus_semilaevis
ENSSDUG00000012740	trmt1	100	81.194	ENSCVAG00000011886	trmt1	100	81.194	Cyprinodon_variegatus
ENSSDUG00000012740	trmt1	97	72.700	ENSDARG00000010978	trmt1	98	73.002	Danio_rerio
ENSSDUG00000012740	trmt1	76	45.301	ENSDNOG00000048240	-	89	45.301	Dasypus_novemcinctus
ENSSDUG00000012740	trmt1	84	65.149	ENSDORG00000014298	Trmt1	86	65.149	Dipodomys_ordii
ENSSDUG00000012740	trmt1	82	45.648	FBgn0032430	CG6388	95	45.599	Drosophila_melanogaster
ENSSDUG00000012740	trmt1	85	48.090	ENSEBUG00000003449	trmt1	83	48.174	Eptatretus_burgeri
ENSSDUG00000012740	trmt1	89	64.298	ENSEASG00005004050	TRMT1	91	65.470	Equus_asinus_asinus
ENSSDUG00000012740	trmt1	89	64.463	ENSECAG00000016149	TRMT1	91	65.641	Equus_caballus
ENSSDUG00000012740	trmt1	58	56.709	ENSEEUG00000014102	-	100	56.709	Erinaceus_europaeus
ENSSDUG00000012740	trmt1	99	73.894	ENSELUG00000021659	trmt1	99	73.708	Esox_lucius
ENSSDUG00000012740	trmt1	84	66.783	ENSFCAG00000000483	TRMT1	87	66.957	Felis_catus
ENSSDUG00000012740	trmt1	87	65.593	ENSFDAG00000007386	TRMT1	89	65.593	Fukomys_damarensis
ENSSDUG00000012740	trmt1	90	81.086	ENSFHEG00000012865	trmt1	99	80.263	Fundulus_heteroclitus
ENSSDUG00000012740	trmt1	85	74.165	ENSGMOG00000006564	trmt1	99	74.868	Gadus_morhua
ENSSDUG00000012740	trmt1	100	80.896	ENSGAFG00000011862	trmt1	100	81.194	Gambusia_affinis
ENSSDUG00000012740	trmt1	86	83.910	ENSGACG00000000227	trmt1	94	84.775	Gasterosteus_aculeatus
ENSSDUG00000012740	trmt1	89	68.509	ENSGAGG00000016432	TRMT1	84	71.277	Gopherus_agassizii
ENSSDUG00000012740	trmt1	84	67.888	ENSGGOG00000014007	TRMT1	87	67.832	Gorilla_gorilla
ENSSDUG00000012740	trmt1	82	79.053	ENSHBUG00000008821	trmt1	92	79.053	Haplochromis_burtoni
ENSSDUG00000012740	trmt1	87	65.482	ENSHGLG00000015972	TRMT1	89	65.482	Heterocephalus_glaber_female
ENSSDUG00000012740	trmt1	87	61.486	ENSHGLG00100018112	TRMT1	90	61.486	Heterocephalus_glaber_male
ENSSDUG00000012740	trmt1	100	74.627	ENSHCOG00000009447	trmt1	100	74.030	Hippocampus_comes
ENSSDUG00000012740	trmt1	94	71.884	ENSIPUG00000002899	trmt1	95	72.615	Ictalurus_punctatus
ENSSDUG00000012740	trmt1	86	65.136	ENSSTOG00000012531	TRMT1	89	65.136	Ictidomys_tridecemlineatus
ENSSDUG00000012740	trmt1	84	66.667	ENSJJAG00000017154	Trmt1	88	66.667	Jaculus_jaculus
ENSSDUG00000012740	trmt1	99	82.530	ENSKMAG00000011809	trmt1	98	85.616	Kryptolebias_marmoratus
ENSSDUG00000012740	trmt1	100	83.756	ENSLBEG00000012703	trmt1	100	83.756	Labrus_bergylta
ENSSDUG00000012740	trmt1	84	62.390	ENSLACG00000014585	TRMT1	94	62.238	Latimeria_chalumnae
ENSSDUG00000012740	trmt1	85	71.804	ENSLOCG00000006479	trmt1	99	71.804	Lepisosteus_oculatus
ENSSDUG00000012740	trmt1	84	67.422	ENSLAFG00000014072	TRMT1	88	67.422	Loxodonta_africana
ENSSDUG00000012740	trmt1	84	67.657	ENSMFAG00000033143	TRMT1	86	67.657	Macaca_fascicularis
ENSSDUG00000012740	trmt1	84	63.333	ENSMMUG00000001167	TRMT1	87	63.333	Macaca_mulatta
ENSSDUG00000012740	trmt1	84	67.308	ENSMNEG00000037867	TRMT1	86	67.308	Macaca_nemestrina
ENSSDUG00000012740	trmt1	84	67.483	ENSMLEG00000016142	TRMT1	87	67.483	Mandrillus_leucophaeus
ENSSDUG00000012740	trmt1	99	87.425	ENSMAMG00000004357	trmt1	100	87.425	Mastacembelus_armatus
ENSSDUG00000012740	trmt1	100	82.090	ENSMZEG00005014510	trmt1	100	82.090	Maylandia_zebra
ENSSDUG00000012740	trmt1	84	65.794	ENSMAUG00000011134	Trmt1	87	65.913	Mesocricetus_auratus
ENSSDUG00000012740	trmt1	84	67.483	ENSMICG00000000793	TRMT1	86	67.483	Microcebus_murinus
ENSSDUG00000012740	trmt1	84	66.200	ENSMOCG00000015895	Trmt1	86	66.200	Microtus_ochrogaster
ENSSDUG00000012740	trmt1	93	83.654	ENSMMOG00000011097	trmt1	100	83.654	Mola_mola
ENSSDUG00000012740	trmt1	92	64.058	ENSMODG00000011619	TRMT1	95	65.878	Monodelphis_domestica
ENSSDUG00000012740	trmt1	83	67.196	MGP_CAROLIEiJ_G0031304	Trmt1	87	66.228	Mus_caroli
ENSSDUG00000012740	trmt1	83	67.372	ENSMUSG00000001909	Trmt1	86	67.372	Mus_musculus
ENSSDUG00000012740	trmt1	83	67.196	MGP_SPRETEiJ_G0032422	Trmt1	86	67.196	Mus_spretus
ENSSDUG00000012740	trmt1	84	68.174	ENSMPUG00000004210	TRMT1	82	68.174	Mustela_putorius_furo
ENSSDUG00000012740	trmt1	86	66.780	ENSMLUG00000012809	TRMT1	87	66.780	Myotis_lucifugus
ENSSDUG00000012740	trmt1	85	65.858	ENSNGAG00000022486	Trmt1	87	65.858	Nannospalax_galili
ENSSDUG00000012740	trmt1	75	91.358	ENSNBRG00000024376	trmt1	87	91.358	Neolamprologus_brichardi
ENSSDUG00000012740	trmt1	66	67.007	ENSNLEG00000013019	-	83	67.007	Nomascus_leucogenys
ENSSDUG00000012740	trmt1	87	65.812	ENSMEUG00000013756	TRMT1	99	65.812	Notamacropus_eugenii
ENSSDUG00000012740	trmt1	71	70.000	ENSOPRG00000009471	-	74	70.000	Ochotona_princeps
ENSSDUG00000012740	trmt1	84	66.783	ENSODEG00000010323	TRMT1	87	66.783	Octodon_degus
ENSSDUG00000012740	trmt1	100	86.119	ENSONIG00000000400	trmt1	100	86.119	Oreochromis_niloticus
ENSSDUG00000012740	trmt1	70	71.849	ENSOCUG00000021934	TRMT1	90	71.849	Oryctolagus_cuniculus
ENSSDUG00000012740	trmt1	100	76.366	ENSORLG00000020074	trmt1	100	75.628	Oryzias_latipes
ENSSDUG00000012740	trmt1	99	81.212	ENSORLG00020007561	trmt1	98	82.692	Oryzias_latipes_hni
ENSSDUG00000012740	trmt1	99	81.364	ENSORLG00015006547	trmt1	99	80.455	Oryzias_latipes_hsok
ENSSDUG00000012740	trmt1	99	80.995	ENSOMEG00000019343	trmt1	100	80.238	Oryzias_melastigma
ENSSDUG00000012740	trmt1	84	66.667	ENSOGAG00000025576	TRMT1	90	66.957	Otolemur_garnettii
ENSSDUG00000012740	trmt1	86	53.445	ENSOARG00000009397	TRMT1	82	53.782	Ovis_aries
ENSSDUG00000012740	trmt1	84	57.539	ENSPPRG00000012117	TRMT1	87	59.722	Panthera_pardus
ENSSDUG00000012740	trmt1	63	68.276	ENSPTIG00000008833	TRMT1	82	68.276	Panthera_tigris_altaica
ENSSDUG00000012740	trmt1	84	67.888	ENSPTRG00000010557	TRMT1	87	67.832	Pan_troglodytes
ENSSDUG00000012740	trmt1	82	49.117	ENSPTRG00000050421	-	89	49.117	Pan_troglodytes
ENSSDUG00000012740	trmt1	84	67.657	ENSPANG00000009247	TRMT1	87	67.657	Papio_anubis
ENSSDUG00000012740	trmt1	65	58.277	ENSPANG00000034058	-	78	58.277	Papio_anubis
ENSSDUG00000012740	trmt1	100	71.134	ENSPKIG00000005309	trmt1	100	70.987	Paramormyrops_kingsleyae
ENSSDUG00000012740	trmt1	81	60.036	ENSPSIG00000008762	TRMT1	79	60.036	Pelodiscus_sinensis
ENSSDUG00000012740	trmt1	86	83.160	ENSPMGG00000019764	trmt1	92	83.333	Periophthalmus_magnuspinnatus
ENSSDUG00000012740	trmt1	84	66.783	ENSPEMG00000016247	Trmt1	86	66.667	Peromyscus_maniculatus_bairdii
ENSSDUG00000012740	trmt1	86	62.735	ENSPMAG00000004329	trmt1	92	62.735	Petromyzon_marinus
ENSSDUG00000012740	trmt1	86	66.496	ENSPCIG00000019273	TRMT1	90	66.496	Phascolarctos_cinereus
ENSSDUG00000012740	trmt1	100	82.388	ENSPFOG00000008527	trmt1	100	81.791	Poecilia_formosa
ENSSDUG00000012740	trmt1	100	81.493	ENSPLAG00000018788	trmt1	100	81.951	Poecilia_latipinna
ENSSDUG00000012740	trmt1	100	81.791	ENSPMEG00000013120	trmt1	100	81.642	Poecilia_mexicana
ENSSDUG00000012740	trmt1	99	80.422	ENSPREG00000000211	trmt1	96	80.120	Poecilia_reticulata
ENSSDUG00000012740	trmt1	84	67.539	ENSPPYG00000009622	TRMT1	87	67.483	Pongo_abelii
ENSSDUG00000012740	trmt1	84	63.047	ENSPCAG00000003698	TRMT1	87	63.047	Procavia_capensis
ENSSDUG00000012740	trmt1	84	67.133	ENSPCOG00000008653	TRMT1	87	67.133	Propithecus_coquereli
ENSSDUG00000012740	trmt1	84	67.308	ENSPVAG00000015076	TRMT1	87	67.308	Pteropus_vampyrus
ENSSDUG00000012740	trmt1	91	84.020	ENSPNYG00000013960	trmt1	97	84.757	Pundamilia_nyererei
ENSSDUG00000012740	trmt1	71	80.412	ENSPNAG00000024859	trmt1	84	80.412	Pygocentrus_nattereri
ENSSDUG00000012740	trmt1	83	66.667	ENSRNOG00000002914	Trmt1	89	66.667	Rattus_norvegicus
ENSSDUG00000012740	trmt1	85	49.231	ENSRBIG00000037505	-	92	49.744	Rhinopithecus_bieti
ENSSDUG00000012740	trmt1	84	67.776	ENSRBIG00000038324	TRMT1	86	67.776	Rhinopithecus_bieti
ENSSDUG00000012740	trmt1	85	48.718	ENSRROG00000031847	-	91	49.231	Rhinopithecus_roxellana
ENSSDUG00000012740	trmt1	84	67.776	ENSRROG00000028599	TRMT1	86	67.776	Rhinopithecus_roxellana
ENSSDUG00000012740	trmt1	76	38.662	YDR120C	-	93	38.476	Saccharomyces_cerevisiae
ENSSDUG00000012740	trmt1	84	64.623	ENSSBOG00000028861	TRMT1	92	64.623	Saimiri_boliviensis_boliviensis
ENSSDUG00000012740	trmt1	84	69.366	ENSSHAG00000014381	TRMT1	97	67.454	Sarcophilus_harrisii
ENSSDUG00000012740	trmt1	97	72.156	ENSSFOG00015004139	trmt1	99	71.429	Scleropages_formosus
ENSSDUG00000012740	trmt1	100	83.333	ENSSMAG00000021136	trmt1	100	83.480	Scophthalmus_maximus
ENSSDUG00000012740	trmt1	100	99.104	ENSSLDG00000005971	trmt1	100	99.104	Seriola_lalandi_dorsalis
ENSSDUG00000012740	trmt1	76	67.184	ENSSARG00000005138	TRMT1	91	67.184	Sorex_araneus
ENSSDUG00000012740	trmt1	90	50.980	ENSSPUG00000001084	TRMT1	95	51.827	Sphenodon_punctatus
ENSSDUG00000012740	trmt1	100	85.075	ENSSPAG00000007153	trmt1	99	89.713	Stegastes_partitus
ENSSDUG00000012740	trmt1	84	66.899	ENSSSCG00000013744	TRMT1	90	66.899	Sus_scrofa
ENSSDUG00000012740	trmt1	96	74.543	ENSTRUG00000010700	trmt1	95	74.543	Takifugu_rubripes
ENSSDUG00000012740	trmt1	86	86.237	ENSTNIG00000018808	trmt1	99	86.237	Tetraodon_nigroviridis
ENSSDUG00000012740	trmt1	86	63.667	ENSTTRG00000006379	TRMT1	88	63.667	Tursiops_truncatus
ENSSDUG00000012740	trmt1	84	67.483	ENSUAMG00000022911	TRMT1	93	64.410	Ursus_americanus
ENSSDUG00000012740	trmt1	84	67.133	ENSUMAG00000006027	TRMT1	90	67.133	Ursus_maritimus
ENSSDUG00000012740	trmt1	84	67.832	ENSVVUG00000024177	TRMT1	86	67.832	Vulpes_vulpes
ENSSDUG00000012740	trmt1	68	69.783	ENSXETG00000033863	TRMT1	92	69.783	Xenopus_tropicalis
ENSSDUG00000012740	trmt1	100	81.642	ENSXCOG00000015733	trmt1	100	81.493	Xiphophorus_couchianus
ENSSDUG00000012740	trmt1	86	89.703	ENSXMAG00000013823	trmt1	99	89.878	Xiphophorus_maculatus