EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012930 (Gene tree)
Gene ID: 111236943
Gene Symbol: srp19
Alias: zgc:63961
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5955 bases
Position: chrBDQW01000783.1:57378-63332
Accession: 111236943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017699	SRP19	PF01922.17	6.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018023	-	462	XM_022765865	ENSSDUP00000017699	153 (aa)	XP_022621586	-

Gene Model

Click here to download ENSSDUG00000012930's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012930	srp19	91	62.143	ENSG00000153037	SRP19	95	57.273	Homo_sapiens
ENSSDUG00000012930	srp19	95	80.000	ENSAPOG00000002199	srp19	94	80.000	Acanthochromis_polyacanthus
ENSSDUG00000012930	srp19	91	62.857	ENSAMEG00000012623	SRP19	88	62.857	Ailuropoda_melanoleuca
ENSSDUG00000012930	srp19	94	79.167	ENSACIG00000005082	srp19	94	79.167	Amphilophus_citrinellus
ENSSDUG00000012930	srp19	94	81.250	ENSAOCG00000002718	srp19	94	81.250	Amphiprion_ocellaris
ENSSDUG00000012930	srp19	94	81.944	ENSAPEG00000022170	srp19	94	81.944	Amphiprion_percula
ENSSDUG00000012930	srp19	94	84.722	ENSATEG00000012472	srp19	94	84.722	Anabas_testudineus
ENSSDUG00000012930	srp19	80	57.724	ENSAPLG00000002624	SRP19	93	57.937	Anas_platyrhynchos
ENSSDUG00000012930	srp19	88	59.559	ENSACAG00000007550	SRP19	87	60.145	Anolis_carolinensis
ENSSDUG00000012930	srp19	89	52.174	ENSANAG00000029862	-	87	67.368	Aotus_nancymaae
ENSSDUG00000012930	srp19	90	47.143	ENSANAG00000030287	-	89	46.667	Aotus_nancymaae
ENSSDUG00000012930	srp19	91	62.857	ENSANAG00000032576	-	90	62.857	Aotus_nancymaae
ENSSDUG00000012930	srp19	94	78.472	ENSACLG00000006259	srp19	87	88.660	Astatotilapia_calliptera
ENSSDUG00000012930	srp19	93	71.831	ENSAMXG00000043011	srp19	94	72.222	Astyanax_mexicanus
ENSSDUG00000012930	srp19	91	62.143	ENSBTAG00000012803	SRP19	90	62.143	Bos_taurus
ENSSDUG00000012930	srp19	83	42.636	WBGene00018159	F37F2.2	82	42.636	Caenorhabditis_elegans
ENSSDUG00000012930	srp19	91	63.571	ENSCJAG00000038676	-	86	57.547	Callithrix_jacchus
ENSSDUG00000012930	srp19	86	46.617	ENSCJAG00000045531	-	80	46.715	Callithrix_jacchus
ENSSDUG00000012930	srp19	91	62.143	ENSCAFG00000031549	SRP19	90	62.143	Canis_familiaris
ENSSDUG00000012930	srp19	91	62.143	ENSCAFG00020014267	-	90	62.143	Canis_lupus_dingo
ENSSDUG00000012930	srp19	85	62.595	ENSCAFG00020022437	-	92	63.433	Canis_lupus_dingo
ENSSDUG00000012930	srp19	60	69.892	ENSCAFG00020004285	-	86	70.833	Canis_lupus_dingo
ENSSDUG00000012930	srp19	91	62.143	ENSCHIG00000017551	SRP19	90	62.143	Capra_hircus
ENSSDUG00000012930	srp19	91	62.857	ENSTSYG00000007875	SRP19	90	62.857	Carlito_syrichta
ENSSDUG00000012930	srp19	83	50.769	ENSCPOG00000036806	SRP19	89	50.769	Cavia_porcellus
ENSSDUG00000012930	srp19	87	45.522	ENSCCAG00000029821	-	61	45.522	Cebus_capucinus
ENSSDUG00000012930	srp19	91	62.857	ENSCCAG00000035651	-	90	62.857	Cebus_capucinus
ENSSDUG00000012930	srp19	87	46.667	ENSCCAG00000023426	-	80	46.667	Cebus_capucinus
ENSSDUG00000012930	srp19	91	57.143	ENSCATG00000039250	-	89	57.143	Cercocebus_atys
ENSSDUG00000012930	srp19	87	53.333	ENSCATG00000040513	-	77	54.412	Cercocebus_atys
ENSSDUG00000012930	srp19	90	62.590	ENSCLAG00000004791	-	90	62.143	Chinchilla_lanigera
ENSSDUG00000012930	srp19	90	60.432	ENSCLAG00000016055	-	89	60.000	Chinchilla_lanigera
ENSSDUG00000012930	srp19	91	60.714	ENSCHOG00000013452	SRP19	90	60.714	Choloepus_hoffmanni
ENSSDUG00000012930	srp19	93	55.944	ENSCPBG00000013903	SRP19	94	56.552	Chrysemys_picta_bellii
ENSSDUG00000012930	srp19	91	60.714	ENSCGRG00001020510	Srp19	90	60.714	Cricetulus_griseus_chok1gshd
ENSSDUG00000012930	srp19	65	66.346	ENSCGRG00000010716	-	91	66.346	Cricetulus_griseus_crigri
ENSSDUG00000012930	srp19	61	71.579	ENSCGRG00000008542	-	74	71.579	Cricetulus_griseus_crigri
ENSSDUG00000012930	srp19	94	77.083	ENSCSEG00000010039	srp19	94	77.083	Cynoglossus_semilaevis
ENSSDUG00000012930	srp19	94	81.250	ENSCVAG00000017621	srp19	94	81.250	Cyprinodon_variegatus
ENSSDUG00000012930	srp19	93	70.423	ENSDARG00000035699	srp19	94	70.833	Danio_rerio
ENSSDUG00000012930	srp19	91	60.714	ENSDNOG00000013856	SRP19	90	60.714	Dasypus_novemcinctus
ENSSDUG00000012930	srp19	61	73.684	ENSDORG00000004746	Srp19	75	73.684	Dipodomys_ordii
ENSSDUG00000012930	srp19	87	43.609	FBgn0015298	Srp19	75	43.609	Drosophila_melanogaster
ENSSDUG00000012930	srp19	91	60.714	ENSETEG00000017132	SRP19	90	60.714	Echinops_telfairi
ENSSDUG00000012930	srp19	90	60.870	ENSEBUG00000006613	srp19	94	61.111	Eptatretus_burgeri
ENSSDUG00000012930	srp19	91	62.857	ENSEASG00005015182	SRP19	90	62.857	Equus_asinus_asinus
ENSSDUG00000012930	srp19	91	61.429	ENSEEUG00000007298	SRP19	90	61.429	Erinaceus_europaeus
ENSSDUG00000012930	srp19	94	65.972	ENSELUG00000004594	srp19	94	65.972	Esox_lucius
ENSSDUG00000012930	srp19	93	73.944	ENSELUG00000007958	srp19	94	74.306	Esox_lucius
ENSSDUG00000012930	srp19	91	62.857	ENSFCAG00000025895	SRP19	90	62.857	Felis_catus
ENSSDUG00000012930	srp19	91	60.714	ENSFDAG00000013543	SRP19	90	60.714	Fukomys_damarensis
ENSSDUG00000012930	srp19	94	78.472	ENSFHEG00000000493	srp19	94	78.472	Fundulus_heteroclitus
ENSSDUG00000012930	srp19	86	72.519	ENSGMOG00000003264	srp19	94	72.519	Gadus_morhua
ENSSDUG00000012930	srp19	89	59.854	ENSGALG00000000218	SRP19	92	59.028	Gallus_gallus
ENSSDUG00000012930	srp19	93	73.427	ENSGAFG00000015815	srp19	64	73.427	Gambusia_affinis
ENSSDUG00000012930	srp19	95	75.862	ENSGACG00000001093	srp19	91	75.862	Gasterosteus_aculeatus
ENSSDUG00000012930	srp19	93	55.944	ENSGAGG00000025305	SRP19	94	56.552	Gopherus_agassizii
ENSSDUG00000012930	srp19	91	73.571	ENSHBUG00000006131	srp19	90	73.571	Haplochromis_burtoni
ENSSDUG00000012930	srp19	91	60.714	ENSHGLG00000006075	SRP19	90	60.714	Heterocephalus_glaber_female
ENSSDUG00000012930	srp19	91	60.714	ENSHGLG00100015859	SRP19	90	60.714	Heterocephalus_glaber_male
ENSSDUG00000012930	srp19	94	71.034	ENSHCOG00000013231	srp19	94	71.034	Hippocampus_comes
ENSSDUG00000012930	srp19	93	72.535	ENSIPUG00000025084	srp19	94	72.917	Ictalurus_punctatus
ENSSDUG00000012930	srp19	91	62.143	ENSSTOG00000000348	SRP19	90	62.143	Ictidomys_tridecemlineatus
ENSSDUG00000012930	srp19	91	60.714	ENSJJAG00000017185	Srp19	90	60.714	Jaculus_jaculus
ENSSDUG00000012930	srp19	94	82.639	ENSKMAG00000011155	srp19	94	82.639	Kryptolebias_marmoratus
ENSSDUG00000012930	srp19	94	79.167	ENSLBEG00000026727	srp19	94	79.167	Labrus_bergylta
ENSSDUG00000012930	srp19	93	61.538	ENSLACG00000004459	SRP19	87	62.069	Latimeria_chalumnae
ENSSDUG00000012930	srp19	93	69.718	ENSLOCG00000010302	srp19	94	69.444	Lepisosteus_oculatus
ENSSDUG00000012930	srp19	91	60.000	ENSLAFG00000002564	SRP19	90	60.000	Loxodonta_africana
ENSSDUG00000012930	srp19	84	46.565	ENSMFAG00000040055	-	90	47.368	Macaca_fascicularis
ENSSDUG00000012930	srp19	86	56.818	ENSMFAG00000000554	-	88	61.856	Macaca_fascicularis
ENSSDUG00000012930	srp19	87	52.593	ENSMMUG00000032515	-	92	53.676	Macaca_mulatta
ENSSDUG00000012930	srp19	86	57.576	ENSMMUG00000049186	-	93	55.634	Macaca_mulatta
ENSSDUG00000012930	srp19	91	62.143	ENSMNEG00000038714	SRP19	90	62.143	Macaca_nemestrina
ENSSDUG00000012930	srp19	84	46.565	ENSMNEG00000040117	-	90	47.368	Macaca_nemestrina
ENSSDUG00000012930	srp19	94	83.333	ENSMAMG00000018346	srp19	94	83.333	Mastacembelus_armatus
ENSSDUG00000012930	srp19	94	78.472	ENSMZEG00005001765	srp19	94	78.472	Maylandia_zebra
ENSSDUG00000012930	srp19	85	58.779	ENSMGAG00000006762	SRP19	93	59.398	Meleagris_gallopavo
ENSSDUG00000012930	srp19	91	60.714	ENSMICG00000000399	SRP19	90	60.714	Microcebus_murinus
ENSSDUG00000012930	srp19	63	63.918	ENSMICG00000049202	-	90	65.000	Microcebus_murinus
ENSSDUG00000012930	srp19	91	62.143	ENSMOCG00000006534	Srp19	90	62.143	Microtus_ochrogaster
ENSSDUG00000012930	srp19	61	71.579	ENSMOCG00000010532	-	87	71.579	Microtus_ochrogaster
ENSSDUG00000012930	srp19	89	77.941	ENSMMOG00000010417	srp19	81	77.941	Mola_mola
ENSSDUG00000012930	srp19	93	60.839	ENSMODG00000013278	SRP19	94	61.379	Monodelphis_domestica
ENSSDUG00000012930	srp19	94	83.333	ENSMALG00000003858	srp19	94	83.333	Monopterus_albus
ENSSDUG00000012930	srp19	91	63.571	MGP_CAROLIEiJ_G0022086	Srp19	90	63.571	Mus_caroli
ENSSDUG00000012930	srp19	91	63.571	ENSMUSG00000014504	Srp19	90	63.571	Mus_musculus
ENSSDUG00000012930	srp19	91	62.857	MGP_PahariEiJ_G0018820	Srp19	90	62.857	Mus_pahari
ENSSDUG00000012930	srp19	91	63.571	MGP_SPRETEiJ_G0022998	Srp19	90	63.571	Mus_spretus
ENSSDUG00000012930	srp19	91	63.571	ENSMPUG00000012695	SRP19	88	63.571	Mustela_putorius_furo
ENSSDUG00000012930	srp19	88	57.037	ENSMLUG00000024549	-	91	57.664	Myotis_lucifugus
ENSSDUG00000012930	srp19	91	60.000	ENSMLUG00000014793	-	90	60.000	Myotis_lucifugus
ENSSDUG00000012930	srp19	88	57.778	ENSNGAG00000014524	-	95	57.778	Nannospalax_galili
ENSSDUG00000012930	srp19	90	61.871	ENSNGAG00000003440	-	89	61.871	Nannospalax_galili
ENSSDUG00000012930	srp19	90	56.835	ENSNLEG00000035364	-	87	67.368	Nomascus_leucogenys
ENSSDUG00000012930	srp19	84	61.538	ENSMEUG00000012529	SRP19	93	62.121	Notamacropus_eugenii
ENSSDUG00000012930	srp19	83	62.500	ENSOPRG00000010549	SRP19	93	62.879	Ochotona_princeps
ENSSDUG00000012930	srp19	89	57.664	ENSODEG00000019119	-	90	57.857	Octodon_degus
ENSSDUG00000012930	srp19	65	69.608	ENSODEG00000005538	-	89	69.608	Octodon_degus
ENSSDUG00000012930	srp19	59	66.304	ENSODEG00000013862	-	72	67.368	Octodon_degus
ENSSDUG00000012930	srp19	94	78.472	ENSONIG00000000542	srp19	94	78.472	Oreochromis_niloticus
ENSSDUG00000012930	srp19	93	56.944	ENSOANG00000011139	SRP19	78	57.534	Ornithorhynchus_anatinus
ENSSDUG00000012930	srp19	91	61.702	ENSOCUG00000015639	SRP19	90	61.702	Oryctolagus_cuniculus
ENSSDUG00000012930	srp19	94	78.472	ENSORLG00000028267	srp19	92	87.000	Oryzias_latipes
ENSSDUG00000012930	srp19	94	78.472	ENSORLG00020015201	srp19	92	87.000	Oryzias_latipes_hni
ENSSDUG00000012930	srp19	94	78.472	ENSORLG00015007525	srp19	92	87.000	Oryzias_latipes_hsok
ENSSDUG00000012930	srp19	94	77.778	ENSOMEG00000009178	srp19	95	77.778	Oryzias_melastigma
ENSSDUG00000012930	srp19	91	62.143	ENSOGAG00000008579	SRP19	90	62.143	Otolemur_garnettii
ENSSDUG00000012930	srp19	91	61.429	ENSOARG00000016066	SRP19	90	61.429	Ovis_aries
ENSSDUG00000012930	srp19	91	62.143	ENSPPAG00000037062	SRP19	90	62.143	Pan_paniscus
ENSSDUG00000012930	srp19	91	62.857	ENSPPRG00000015591	SRP19	90	62.857	Panthera_pardus
ENSSDUG00000012930	srp19	91	62.857	ENSPTIG00000021474	SRP19	90	62.857	Panthera_tigris_altaica
ENSSDUG00000012930	srp19	91	62.143	ENSPTRG00000017136	SRP19	90	62.143	Pan_troglodytes
ENSSDUG00000012930	srp19	90	57.554	ENSPANG00000034740	-	89	57.143	Papio_anubis
ENSSDUG00000012930	srp19	91	62.143	ENSPANG00000004370	-	90	62.143	Papio_anubis
ENSSDUG00000012930	srp19	94	67.361	ENSPKIG00000018671	srp19	94	67.361	Paramormyrops_kingsleyae
ENSSDUG00000012930	srp19	85	55.725	ENSPSIG00000013811	SRP19	93	56.391	Pelodiscus_sinensis
ENSSDUG00000012930	srp19	94	77.083	ENSPMGG00000015313	srp19	94	77.083	Periophthalmus_magnuspinnatus
ENSSDUG00000012930	srp19	86	63.636	ENSPEMG00000004412	-	88	63.636	Peromyscus_maniculatus_bairdii
ENSSDUG00000012930	srp19	95	56.552	ENSPMAG00000002685	srp19	93	57.746	Petromyzon_marinus
ENSSDUG00000012930	srp19	93	60.839	ENSPCIG00000010250	SRP19	93	61.379	Phascolarctos_cinereus
ENSSDUG00000012930	srp19	94	79.167	ENSPFOG00000015887	srp19	94	79.167	Poecilia_formosa
ENSSDUG00000012930	srp19	94	79.167	ENSPLAG00000007784	srp19	88	90.526	Poecilia_latipinna
ENSSDUG00000012930	srp19	94	78.472	ENSPMEG00000003056	srp19	88	90.526	Poecilia_mexicana
ENSSDUG00000012930	srp19	95	79.310	ENSPREG00000017307	srp19	94	79.310	Poecilia_reticulata
ENSSDUG00000012930	srp19	91	62.143	ENSPPYG00000029584	SRP19	88	62.143	Pongo_abelii
ENSSDUG00000012930	srp19	61	70.526	ENSPCAG00000000228	SRP19	66	70.526	Procavia_capensis
ENSSDUG00000012930	srp19	91	62.143	ENSPCOG00000023239	SRP19	90	62.143	Propithecus_coquereli
ENSSDUG00000012930	srp19	91	62.143	ENSPVAG00000004895	SRP19	90	62.143	Pteropus_vampyrus
ENSSDUG00000012930	srp19	93	71.329	ENSPNAG00000009392	srp19	94	71.724	Pygocentrus_nattereri
ENSSDUG00000012930	srp19	91	61.429	ENSRNOG00000020204	Srp19	90	61.429	Rattus_norvegicus
ENSSDUG00000012930	srp19	56	52.326	ENSRBIG00000031651	-	83	52.326	Rhinopithecus_bieti
ENSSDUG00000012930	srp19	90	55.474	ENSRBIG00000040440	-	90	55.714	Rhinopithecus_bieti
ENSSDUG00000012930	srp19	91	62.143	ENSRBIG00000015627	-	90	62.143	Rhinopithecus_bieti
ENSSDUG00000012930	srp19	90	55.474	ENSRROG00000037054	-	90	55.714	Rhinopithecus_roxellana
ENSSDUG00000012930	srp19	88	49.265	ENSRROG00000037316	-	91	50.000	Rhinopithecus_roxellana
ENSSDUG00000012930	srp19	91	50.714	ENSSBOG00000032685	-	90	60.000	Saimiri_boliviensis_boliviensis
ENSSDUG00000012930	srp19	91	62.857	ENSSBOG00000028071	-	90	62.857	Saimiri_boliviensis_boliviensis
ENSSDUG00000012930	srp19	94	71.528	ENSSFOG00015022139	srp19	94	71.528	Scleropages_formosus
ENSSDUG00000012930	srp19	95	78.621	ENSSMAG00000016803	srp19	94	78.621	Scophthalmus_maximus
ENSSDUG00000012930	srp19	63	72.449	ENSSLDG00000021916	-	71	72.449	Seriola_lalandi_dorsalis
ENSSDUG00000012930	srp19	91	60.000	ENSSARG00000000615	SRP19	90	60.000	Sorex_araneus
ENSSDUG00000012930	srp19	87	61.194	ENSSPUG00000015769	SRP19	92	60.417	Sphenodon_punctatus
ENSSDUG00000012930	srp19	91	62.143	ENSSSCG00000026230	SRP19	90	62.143	Sus_scrofa
ENSSDUG00000012930	srp19	87	59.701	ENSTGUG00000001019	SRP19	88	60.432	Taeniopygia_guttata
ENSSDUG00000012930	srp19	94	77.027	ENSTRUG00000023119	srp19	94	77.027	Takifugu_rubripes
ENSSDUG00000012930	srp19	94	79.861	ENSTNIG00000018880	srp19	94	79.861	Tetraodon_nigroviridis
ENSSDUG00000012930	srp19	91	61.429	ENSTTRG00000001690	SRP19	89	60.993	Tursiops_truncatus
ENSSDUG00000012930	srp19	89	62.774	ENSUAMG00000000111	SRP19	90	63.571	Ursus_americanus
ENSSDUG00000012930	srp19	91	63.571	ENSUMAG00000016997	SRP19	90	63.571	Ursus_maritimus
ENSSDUG00000012930	srp19	91	62.857	ENSVPAG00000006001	SRP19	90	62.857	Vicugna_pacos
ENSSDUG00000012930	srp19	65	70.000	ENSVVUG00000012423	SRP19	87	79.412	Vulpes_vulpes
ENSSDUG00000012930	srp19	86	58.647	ENSXETG00000011993	srp19	86	58.647	Xenopus_tropicalis
ENSSDUG00000012930	srp19	95	62.759	ENSXCOG00000012530	srp19	83	68.462	Xiphophorus_couchianus
ENSSDUG00000012930	srp19	94	79.167	ENSXMAG00000029788	srp19	94	79.167	Xiphophorus_maculatus