EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000012974 (Gene tree)
Gene ID: 111236772
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 20659 bases
Position: chrBDQW01000025.1:11166895-11187553
Accession: 111236772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017797	GTP_EFTU	PF00009.27	3.4e-47	1	1
ENSSDUP00000017797	MMR_HSR1	PF01926.23	3.8e-06	1	1
ENSSDUP00000017797	GTP_EFTU_D2	PF03144.25	2.4e-08	1	1
ENSSDUP00000017797	GTP_EFTU_D3	PF03143.17	1.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018122	-	4536	XM_022765623	ENSSDUP00000017797	700 (aa)	XP_022621344	UPI000BBED9B4

Gene Model

Click here to download ENSSDUG00000012974's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000012974	hbs1l	61	41.190	ENSSDUG00000008198	-	95	41.190
ENSSDUG00000012974	hbs1l	61	40.826	ENSSDUG00000004897	eef1a1b	94	40.826
ENSSDUG00000012974	hbs1l	61	41.055	ENSSDUG00000020050	EEF1A1	94	41.055
ENSSDUG00000012974	hbs1l	61	40.654	ENSSDUG00000016908	gspt1l	75	40.706
ENSSDUG00000012974	hbs1l	61	37.585	ENSSDUG00000009163	si:dkey-37o8.1	95	37.585
ENSSDUG00000012974	hbs1l	61	41.002	ENSSDUG00000008223	-	94	41.055
ENSSDUG00000012974	hbs1l	60	40.941	ENSSDUG00000008404	GSPT1	72	40.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012974	hbs1l	100	72.096	ENSG00000112339	HBS1L	95	86.335	Homo_sapiens
ENSSDUG00000012974	hbs1l	93	76.579	ENSAPOG00000013169	hbs1l	97	76.425	Acanthochromis_polyacanthus
ENSSDUG00000012974	hbs1l	99	72.214	ENSAMEG00000009749	HBS1L	99	71.368	Ailuropoda_melanoleuca
ENSSDUG00000012974	hbs1l	76	91.806	ENSACIG00000017087	hbs1l	91	91.806	Amphilophus_citrinellus
ENSSDUG00000012974	hbs1l	100	89.758	ENSAPEG00000008320	hbs1l	100	89.758	Amphiprion_percula
ENSSDUG00000012974	hbs1l	100	92.472	ENSATEG00000004459	hbs1l	100	92.472	Anabas_testudineus
ENSSDUG00000012974	hbs1l	98	70.546	ENSAPLG00000007791	HBS1L	100	70.115	Anas_platyrhynchos
ENSSDUG00000012974	hbs1l	100	72.096	ENSACAG00000010120	HBS1L	100	72.096	Anolis_carolinensis
ENSSDUG00000012974	hbs1l	100	71.994	ENSANAG00000038076	HBS1L	95	81.250	Aotus_nancymaae
ENSSDUG00000012974	hbs1l	100	90.469	ENSACLG00000010469	hbs1l	100	90.469	Astatotilapia_calliptera
ENSSDUG00000012974	hbs1l	100	80.282	ENSAMXG00000004260	hbs1l	97	86.007	Astyanax_mexicanus
ENSSDUG00000012974	hbs1l	100	72.702	ENSBTAG00000020174	HBS1L	100	71.853	Bos_taurus
ENSSDUG00000012974	hbs1l	69	45.328	WBGene00010622	K07A12.4	86	43.691	Caenorhabditis_elegans
ENSSDUG00000012974	hbs1l	100	71.994	ENSCJAG00000007678	HBS1L	94	81.250	Callithrix_jacchus
ENSSDUG00000012974	hbs1l	100	71.711	ENSCAFG00000000226	HBS1L	100	71.004	Canis_familiaris
ENSSDUG00000012974	hbs1l	100	71.711	ENSCAFG00020021904	HBS1L	100	71.004	Canis_lupus_dingo
ENSSDUG00000012974	hbs1l	100	72.419	ENSCHIG00000010299	HBS1L	100	71.570	Capra_hircus
ENSSDUG00000012974	hbs1l	100	71.146	ENSTSYG00000007089	HBS1L	95	77.941	Carlito_syrichta
ENSSDUG00000012974	hbs1l	99	62.910	ENSCPOG00000007015	HBS1L	99	62.910	Cavia_porcellus
ENSSDUG00000012974	hbs1l	100	70.580	ENSCCAG00000033863	HBS1L	100	72.447	Cebus_capucinus
ENSSDUG00000012974	hbs1l	100	72.521	ENSCATG00000043042	HBS1L	93	81.250	Cercocebus_atys
ENSSDUG00000012974	hbs1l	100	71.711	ENSCLAG00000004937	HBS1L	100	71.146	Chinchilla_lanigera
ENSSDUG00000012974	hbs1l	100	72.136	ENSCSAG00000016791	HBS1L	100	71.328	Chlorocebus_sabaeus
ENSSDUG00000012974	hbs1l	97	56.977	ENSCHOG00000001852	HBS1L	99	55.827	Choloepus_hoffmanni
ENSSDUG00000012974	hbs1l	100	71.570	ENSCPBG00000017635	HBS1L	100	71.570	Chrysemys_picta_bellii
ENSSDUG00000012974	hbs1l	99	48.072	ENSCING00000005592	-	99	47.940	Ciona_intestinalis
ENSSDUG00000012974	hbs1l	92	59.381	ENSCSAVG00000002297	-	99	60.000	Ciona_savignyi
ENSSDUG00000012974	hbs1l	100	71.813	ENSCANG00000031208	HBS1L	93	81.250	Colobus_angolensis_palliatus
ENSSDUG00000012974	hbs1l	100	72.254	ENSCGRG00001024531	Hbs1l	100	71.549	Cricetulus_griseus_chok1gshd
ENSSDUG00000012974	hbs1l	100	72.254	ENSCGRG00000017361	Hbs1l	100	71.549	Cricetulus_griseus_crigri
ENSSDUG00000012974	hbs1l	99	88.210	ENSCSEG00000002794	hbs1l	94	87.784	Cynoglossus_semilaevis
ENSSDUG00000012974	hbs1l	100	85.633	ENSCVAG00000001462	hbs1l	100	85.633	Cyprinodon_variegatus
ENSSDUG00000012974	hbs1l	100	79.774	ENSDARG00000036778	hbs1l	100	80.057	Danio_rerio
ENSSDUG00000012974	hbs1l	100	71.348	ENSDORG00000005958	Hbs1l	100	71.348	Dipodomys_ordii
ENSSDUG00000012974	hbs1l	99	45.856	FBgn0042712	HBS1	100	46.250	Drosophila_melanogaster
ENSSDUG00000012974	hbs1l	100	65.819	ENSETEG00000000913	HBS1L	100	64.972	Echinops_telfairi
ENSSDUG00000012974	hbs1l	99	58.699	ENSEBUG00000010759	hbs1l	100	64.563	Eptatretus_burgeri
ENSSDUG00000012974	hbs1l	100	71.751	ENSEASG00005011148	HBS1L	100	70.787	Equus_asinus_asinus
ENSSDUG00000012974	hbs1l	100	71.791	ENSECAG00000004470	HBS1L	100	70.945	Equus_caballus
ENSSDUG00000012974	hbs1l	100	67.701	ENSEEUG00000013582	HBS1L	100	67.651	Erinaceus_europaeus
ENSSDUG00000012974	hbs1l	91	76.955	ENSELUG00000006444	hbs1l	96	76.955	Esox_lucius
ENSSDUG00000012974	hbs1l	100	72.458	ENSFCAG00000001810	HBS1L	100	80.077	Felis_catus
ENSSDUG00000012974	hbs1l	87	72.846	ENSFALG00000011898	HBS1L	100	72.846	Ficedula_albicollis
ENSSDUG00000012974	hbs1l	100	71.711	ENSFDAG00000011841	HBS1L	100	71.146	Fukomys_damarensis
ENSSDUG00000012974	hbs1l	100	87.749	ENSFHEG00000006942	hbs1l	100	87.749	Fundulus_heteroclitus
ENSSDUG00000012974	hbs1l	99	79.433	ENSGMOG00000011843	hbs1l	100	79.433	Gadus_morhua
ENSSDUG00000012974	hbs1l	100	72.740	ENSGALG00000013962	HBS1L	100	71.751	Gallus_gallus
ENSSDUG00000012974	hbs1l	100	88.478	ENSGAFG00000004157	hbs1l	100	88.478	Gambusia_affinis
ENSSDUG00000012974	hbs1l	99	85.917	ENSGACG00000011035	hbs1l	100	86.202	Gasterosteus_aculeatus
ENSSDUG00000012974	hbs1l	100	70.904	ENSGAGG00000002033	HBS1L	100	70.480	Gopherus_agassizii
ENSSDUG00000012974	hbs1l	77	73.849	ENSGGOG00000034956	-	93	82.796	Gorilla_gorilla
ENSSDUG00000012974	hbs1l	100	90.612	ENSHBUG00000013424	hbs1l	100	90.612	Haplochromis_burtoni
ENSSDUG00000012974	hbs1l	100	71.469	ENSHGLG00000000516	HBS1L	100	71.105	Heterocephalus_glaber_female
ENSSDUG00000012974	hbs1l	100	71.469	ENSHGLG00100003550	HBS1L	100	71.105	Heterocephalus_glaber_male
ENSSDUG00000012974	hbs1l	100	84.233	ENSHCOG00000007581	hbs1l	94	83.262	Hippocampus_comes
ENSSDUG00000012974	hbs1l	100	79.291	ENSIPUG00000010748	hbs1l	100	78.865	Ictalurus_punctatus
ENSSDUG00000012974	hbs1l	100	72.175	ENSSTOG00000007551	HBS1L	100	71.429	Ictidomys_tridecemlineatus
ENSSDUG00000012974	hbs1l	100	56.011	ENSJJAG00000012660	-	100	55.446	Jaculus_jaculus
ENSSDUG00000012974	hbs1l	99	69.448	ENSJJAG00000017024	-	97	69.504	Jaculus_jaculus
ENSSDUG00000012974	hbs1l	100	89.047	ENSKMAG00000012130	hbs1l	100	89.047	Kryptolebias_marmoratus
ENSSDUG00000012974	hbs1l	100	90.754	ENSLBEG00000002784	hbs1l	100	95.181	Labrus_bergylta
ENSSDUG00000012974	hbs1l	69	78.571	ENSLACG00000004528	HBS1L	99	78.571	Latimeria_chalumnae
ENSSDUG00000012974	hbs1l	100	74.930	ENSLOCG00000016221	hbs1l	100	74.930	Lepisosteus_oculatus
ENSSDUG00000012974	hbs1l	100	69.394	ENSLAFG00000007835	HBS1L	100	68.936	Loxodonta_africana
ENSSDUG00000012974	hbs1l	100	72.191	ENSMFAG00000003766	HBS1L	95	81.250	Macaca_fascicularis
ENSSDUG00000012974	hbs1l	89	78.453	ENSMMUG00000004802	HBS1L	98	78.558	Macaca_mulatta
ENSSDUG00000012974	hbs1l	100	72.191	ENSMNEG00000043942	HBS1L	95	81.250	Macaca_nemestrina
ENSSDUG00000012974	hbs1l	99	72.262	ENSMLEG00000043218	HBS1L	93	81.250	Mandrillus_leucophaeus
ENSSDUG00000012974	hbs1l	100	91.335	ENSMAMG00000016498	hbs1l	100	91.335	Mastacembelus_armatus
ENSSDUG00000012974	hbs1l	76	92.007	ENSMZEG00005024018	-	90	92.007	Maylandia_zebra
ENSSDUG00000012974	hbs1l	100	90.469	ENSMZEG00005015575	hbs1l	100	90.469	Maylandia_zebra
ENSSDUG00000012974	hbs1l	99	71.266	ENSMGAG00000013065	HBS1L	99	70.270	Meleagris_gallopavo
ENSSDUG00000012974	hbs1l	100	72.096	ENSMAUG00000001077	Hbs1l	100	71.388	Mesocricetus_auratus
ENSSDUG00000012974	hbs1l	99	67.801	ENSMICG00000001533	-	99	67.801	Microcebus_murinus
ENSSDUG00000012974	hbs1l	100	61.669	ENSMICG00000030043	-	96	80.645	Microcebus_murinus
ENSSDUG00000012974	hbs1l	100	72.316	ENSMOCG00000023038	Hbs1l	100	71.610	Microtus_ochrogaster
ENSSDUG00000012974	hbs1l	97	91.069	ENSMMOG00000015507	hbs1l	100	91.069	Mola_mola
ENSSDUG00000012974	hbs1l	100	71.610	ENSMODG00000017499	HBS1L	100	71.610	Monodelphis_domestica
ENSSDUG00000012974	hbs1l	100	93.324	ENSMALG00000010768	hbs1l	100	93.324	Monopterus_albus
ENSSDUG00000012974	hbs1l	100	71.629	MGP_CAROLIEiJ_G0015162	Hbs1l	100	70.787	Mus_caroli
ENSSDUG00000012974	hbs1l	100	72.073	ENSMUSG00000019977	Hbs1l	100	90.323	Mus_musculus
ENSSDUG00000012974	hbs1l	100	70.950	MGP_PahariEiJ_G0023782	Hbs1l	100	70.251	Mus_pahari
ENSSDUG00000012974	hbs1l	100	71.629	MGP_SPRETEiJ_G0015970	Hbs1l	100	70.927	Mus_spretus
ENSSDUG00000012974	hbs1l	100	72.238	ENSMPUG00000014810	HBS1L	100	71.671	Mustela_putorius_furo
ENSSDUG00000012974	hbs1l	100	71.186	ENSMLUG00000010618	HBS1L	100	70.480	Myotis_lucifugus
ENSSDUG00000012974	hbs1l	100	71.853	ENSNGAG00000015184	Hbs1l	100	71.711	Nannospalax_galili
ENSSDUG00000012974	hbs1l	100	90.185	ENSNBRG00000020095	hbs1l	100	91.160	Neolamprologus_brichardi
ENSSDUG00000012974	hbs1l	100	71.388	ENSNLEG00000014721	HBS1L	94	81.250	Nomascus_leucogenys
ENSSDUG00000012974	hbs1l	82	82.234	ENSMEUG00000003907	HBS1L	81	82.234	Notamacropus_eugenii
ENSSDUG00000012974	hbs1l	75	78.512	ENSOPRG00000013595	HBS1L	71	78.512	Ochotona_princeps
ENSSDUG00000012974	hbs1l	99	71.266	ENSODEG00000008959	HBS1L	100	70.767	Octodon_degus
ENSSDUG00000012974	hbs1l	100	90.327	ENSONIG00000000460	hbs1l	100	89.816	Oreochromis_niloticus
ENSSDUG00000012974	hbs1l	99	70.381	ENSOANG00000002684	-	99	70.014	Ornithorhynchus_anatinus
ENSSDUG00000012974	hbs1l	100	68.258	ENSOCUG00000011619	HBS1L	99	69.793	Oryctolagus_cuniculus
ENSSDUG00000012974	hbs1l	100	86.344	ENSORLG00000016559	hbs1l	100	86.344	Oryzias_latipes
ENSSDUG00000012974	hbs1l	100	86.486	ENSORLG00020003827	hbs1l	100	86.486	Oryzias_latipes_hni
ENSSDUG00000012974	hbs1l	100	86.202	ENSORLG00015023105	hbs1l	100	86.202	Oryzias_latipes_hsok
ENSSDUG00000012974	hbs1l	100	86.913	ENSOMEG00000016715	hbs1l	100	86.913	Oryzias_melastigma
ENSSDUG00000012974	hbs1l	100	72.380	ENSOGAG00000012604	HBS1L	100	71.570	Otolemur_garnettii
ENSSDUG00000012974	hbs1l	99	72.624	ENSOARG00000014798	-	99	71.773	Ovis_aries
ENSSDUG00000012974	hbs1l	100	72.277	ENSOARG00000005671	-	100	71.429	Ovis_aries
ENSSDUG00000012974	hbs1l	100	72.238	ENSPPAG00000029900	HBS1L	93	81.250	Pan_paniscus
ENSSDUG00000012974	hbs1l	100	72.380	ENSPPRG00000005285	HBS1L	95	81.250	Panthera_pardus
ENSSDUG00000012974	hbs1l	100	72.521	ENSPTIG00000015803	HBS1L	95	81.250	Panthera_tigris_altaica
ENSSDUG00000012974	hbs1l	100	72.238	ENSPTRG00000018630	HBS1L	93	81.250	Pan_troglodytes
ENSSDUG00000012974	hbs1l	100	72.521	ENSPANG00000007075	HBS1L	93	81.250	Papio_anubis
ENSSDUG00000012974	hbs1l	98	81.061	ENSPKIG00000023171	hbs1l	100	75.533	Paramormyrops_kingsleyae
ENSSDUG00000012974	hbs1l	86	68.515	ENSPSIG00000016467	HBS1L	97	68.026	Pelodiscus_sinensis
ENSSDUG00000012974	hbs1l	99	82.857	ENSPMGG00000018051	hbs1l	96	90.957	Periophthalmus_magnuspinnatus
ENSSDUG00000012974	hbs1l	100	72.254	ENSPEMG00000014369	Hbs1l	100	71.549	Peromyscus_maniculatus_bairdii
ENSSDUG00000012974	hbs1l	100	64.266	ENSPMAG00000002516	hbs1l	100	63.842	Petromyzon_marinus
ENSSDUG00000012974	hbs1l	100	88.227	ENSPFOG00000021764	hbs1l	100	88.227	Poecilia_formosa
ENSSDUG00000012974	hbs1l	100	88.620	ENSPLAG00000006193	hbs1l	100	88.620	Poecilia_latipinna
ENSSDUG00000012974	hbs1l	100	88.620	ENSPMEG00000000925	hbs1l	100	88.620	Poecilia_mexicana
ENSSDUG00000012974	hbs1l	100	87.909	ENSPREG00000011270	hbs1l	100	87.909	Poecilia_reticulata
ENSSDUG00000012974	hbs1l	100	71.530	ENSPPYG00000017027	HBS1L	100	70.863	Pongo_abelii
ENSSDUG00000012974	hbs1l	76	77.079	ENSPCAG00000007002	HBS1L	79	77.079	Procavia_capensis
ENSSDUG00000012974	hbs1l	84	76.996	ENSPVAG00000015229	HBS1L	85	76.111	Pteropus_vampyrus
ENSSDUG00000012974	hbs1l	100	90.327	ENSPNYG00000013360	hbs1l	100	90.327	Pundamilia_nyererei
ENSSDUG00000012974	hbs1l	100	79.577	ENSPNAG00000026721	hbs1l	100	80.000	Pygocentrus_nattereri
ENSSDUG00000012974	hbs1l	100	70.968	ENSRNOG00000014531	Hbs1l	100	70.266	Rattus_norvegicus
ENSSDUG00000012974	hbs1l	100	72.096	ENSRBIG00000004484	HBS1L	100	71.570	Rhinopithecus_bieti
ENSSDUG00000012974	hbs1l	100	71.955	ENSRROG00000026176	HBS1L	93	79.167	Rhinopithecus_roxellana
ENSSDUG00000012974	hbs1l	61	38.255	YKR084C	-	73	38.255	Saccharomyces_cerevisiae
ENSSDUG00000012974	hbs1l	100	72.136	ENSSBOG00000019696	-	95	81.250	Saimiri_boliviensis_boliviensis
ENSSDUG00000012974	hbs1l	100	64.074	ENSSBOG00000016930	-	98	78.723	Saimiri_boliviensis_boliviensis
ENSSDUG00000012974	hbs1l	100	71.429	ENSSHAG00000013509	HBS1L	100	71.429	Sarcophilus_harrisii
ENSSDUG00000012974	hbs1l	99	75.818	ENSSFOG00015017544	hbs1l	96	75.818	Scleropages_formosus
ENSSDUG00000012974	hbs1l	100	89.474	ENSSMAG00000010621	hbs1l	100	89.758	Scophthalmus_maximus
ENSSDUG00000012974	hbs1l	100	99.143	ENSSLDG00000004960	hbs1l	100	99.143	Seriola_lalandi_dorsalis
ENSSDUG00000012974	hbs1l	98	70.870	ENSSARG00000006747	HBS1L	100	70.435	Sorex_araneus
ENSSDUG00000012974	hbs1l	99	69.929	ENSSPUG00000012389	HBS1L	99	70.071	Sphenodon_punctatus
ENSSDUG00000012974	hbs1l	97	72.182	ENSSSCG00000004169	HBS1L	100	71.081	Sus_scrofa
ENSSDUG00000012974	hbs1l	99	71.328	ENSTGUG00000011507	HBS1L	99	70.845	Taeniopygia_guttata
ENSSDUG00000012974	hbs1l	99	85.185	ENSTRUG00000016128	hbs1l	99	85.185	Takifugu_rubripes
ENSSDUG00000012974	hbs1l	99	85.307	ENSTNIG00000016320	hbs1l	99	85.307	Tetraodon_nigroviridis
ENSSDUG00000012974	hbs1l	100	65.957	ENSTBEG00000009950	HBS1L	100	65.957	Tupaia_belangeri
ENSSDUG00000012974	hbs1l	99	71.813	ENSTTRG00000003715	HBS1L	99	71.246	Tursiops_truncatus
ENSSDUG00000012974	hbs1l	100	72.433	ENSUAMG00000001064	HBS1L	100	71.589	Ursus_americanus
ENSSDUG00000012974	hbs1l	100	72.293	ENSUMAG00000024395	HBS1L	100	84.211	Ursus_maritimus
ENSSDUG00000012974	hbs1l	88	79.298	ENSVPAG00000006280	HBS1L	86	81.250	Vicugna_pacos
ENSSDUG00000012974	hbs1l	100	71.994	ENSVVUG00000000295	HBS1L	100	71.287	Vulpes_vulpes
ENSSDUG00000012974	hbs1l	100	71.124	ENSXETG00000003726	hbs1l	100	70.982	Xenopus_tropicalis
ENSSDUG00000012974	hbs1l	99	86.610	ENSXCOG00000005323	hbs1l	100	86.610	Xiphophorus_couchianus
ENSSDUG00000012974	hbs1l	100	88.905	ENSXMAG00000004359	hbs1l	100	88.905	Xiphophorus_maculatus