EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000012982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4845 bases
Position: chrBDQW01000003.1:17754020-17758864
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017778	RVT_1	PF00078.27	4.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018102	-	4845	-	ENSSDUP00000017778	1223 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000012982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000012982	-	53	42.191	ENSSDUG00000010009	-	64	42.191
ENSSDUG00000012982	-	50	76.346	ENSSDUG00000008761	-	100	76.346
ENSSDUG00000012982	-	53	36.453	ENSSDUG00000002460	-	52	36.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012982	-	73	61.937	ENSATEG00000021232	-	87	61.937	Anabas_testudineus
ENSSDUG00000012982	-	73	62.050	ENSATEG00000007261	-	87	62.050	Anabas_testudineus
ENSSDUG00000012982	-	71	60.414	ENSATEG00000018457	-	79	60.414	Anabas_testudineus
ENSSDUG00000012982	-	86	34.194	ENSACAG00000029570	-	83	34.105	Anolis_carolinensis
ENSSDUG00000012982	-	84	33.213	ENSACAG00000028334	-	79	33.213	Anolis_carolinensis
ENSSDUG00000012982	-	81	32.389	ENSACAG00000029297	-	79	32.389	Anolis_carolinensis
ENSSDUG00000012982	-	70	60.681	ENSACLG00000025657	-	96	61.059	Astatotilapia_calliptera
ENSSDUG00000012982	-	73	60.382	ENSACLG00000017671	-	79	60.517	Astatotilapia_calliptera
ENSSDUG00000012982	-	66	55.760	ENSACLG00000022094	-	78	55.760	Astatotilapia_calliptera
ENSSDUG00000012982	-	66	59.851	ENSACLG00000001434	-	93	59.851	Astatotilapia_calliptera
ENSSDUG00000012982	-	66	55.392	ENSACLG00000008738	-	72	55.392	Astatotilapia_calliptera
ENSSDUG00000012982	-	77	49.636	ENSAMXG00000031305	-	91	49.636	Astyanax_mexicanus
ENSSDUG00000012982	-	99	47.416	ENSAMXG00000040695	-	82	47.416	Astyanax_mexicanus
ENSSDUG00000012982	-	77	50.208	ENSAMXG00000042521	-	75	50.208	Astyanax_mexicanus
ENSSDUG00000012982	-	98	47.001	ENSAMXG00000033138	-	85	47.001	Astyanax_mexicanus
ENSSDUG00000012982	-	68	53.270	ENSAMXG00000037157	-	95	53.270	Astyanax_mexicanus
ENSSDUG00000012982	-	99	46.508	ENSAMXG00000040149	-	79	46.825	Astyanax_mexicanus
ENSSDUG00000012982	-	99	45.751	ENSAMXG00000036523	-	74	45.751	Astyanax_mexicanus
ENSSDUG00000012982	-	50	56.627	ENSAMXG00000033786	-	91	56.627	Astyanax_mexicanus
ENSSDUG00000012982	-	99	46.099	ENSAMXG00000040104	-	73	46.264	Astyanax_mexicanus
ENSSDUG00000012982	-	60	64.617	ENSCVAG00000020653	-	83	64.617	Cyprinodon_variegatus
ENSSDUG00000012982	-	98	56.788	ENSDARG00000086495	BX546500.1	88	56.788	Danio_rerio
ENSSDUG00000012982	-	98	56.561	ENSDARG00000116402	CR925755.2	84	56.645	Danio_rerio
ENSSDUG00000012982	-	100	54.560	ENSDARG00000114583	BX890543.1	84	54.815	Danio_rerio
ENSSDUG00000012982	-	71	53.584	ENSDARG00000101547	CR354395.1	97	53.584	Danio_rerio
ENSSDUG00000012982	-	100	46.310	ENSDARG00000112601	FO704673.1	82	46.310	Danio_rerio
ENSSDUG00000012982	-	99	46.148	ENSDARG00000116832	CR749164.1	81	46.248	Danio_rerio
ENSSDUG00000012982	-	100	55.331	ENSDARG00000099359	CR855320.1	85	55.331	Danio_rerio
ENSSDUG00000012982	-	100	55.109	ENSDARG00000113243	BX511224.1	85	55.109	Danio_rerio
ENSSDUG00000012982	-	100	56.336	ENSDARG00000113678	BX511082.1	85	56.336	Danio_rerio
ENSSDUG00000012982	-	99	49.716	ENSFHEG00000015797	-	94	49.838	Fundulus_heteroclitus
ENSSDUG00000012982	-	67	59.466	ENSGAFG00000020459	-	85	59.466	Gambusia_affinis
ENSSDUG00000012982	-	99	51.393	ENSGAFG00000015891	-	85	51.475	Gambusia_affinis
ENSSDUG00000012982	-	99	48.520	ENSKMAG00000012888	-	93	48.520	Kryptolebias_marmoratus
ENSSDUG00000012982	-	65	62.121	ENSKMAG00000000229	-	84	62.121	Kryptolebias_marmoratus
ENSSDUG00000012982	-	93	53.241	ENSKMAG00000021870	-	81	53.500	Kryptolebias_marmoratus
ENSSDUG00000012982	-	93	49.431	ENSKMAG00000010001	-	87	47.412	Kryptolebias_marmoratus
ENSSDUG00000012982	-	71	54.650	ENSKMAG00000010098	-	99	54.650	Kryptolebias_marmoratus
ENSSDUG00000012982	-	74	57.650	ENSKMAG00000017146	-	86	57.650	Kryptolebias_marmoratus
ENSSDUG00000012982	-	93	53.013	ENSKMAG00000006793	-	83	50.569	Kryptolebias_marmoratus
ENSSDUG00000012982	-	72	61.092	ENSORLG00000028742	-	78	61.092	Oryzias_latipes
ENSSDUG00000012982	-	85	54.554	ENSORLG00000027979	-	76	54.389	Oryzias_latipes
ENSSDUG00000012982	-	100	70.986	ENSORLG00000024098	-	85	70.931	Oryzias_latipes
ENSSDUG00000012982	-	99	49.316	ENSORLG00000026705	-	83	49.316	Oryzias_latipes
ENSSDUG00000012982	-	61	63.418	ENSORLG00000027753	-	77	63.418	Oryzias_latipes
ENSSDUG00000012982	-	71	60.184	ENSORLG00000022135	-	80	60.184	Oryzias_latipes
ENSSDUG00000012982	-	100	71.149	ENSORLG00000030124	-	85	71.093	Oryzias_latipes
ENSSDUG00000012982	-	99	51.148	ENSORLG00000023643	-	80	51.148	Oryzias_latipes
ENSSDUG00000012982	-	99	51.090	ENSORLG00000022515	-	84	51.090	Oryzias_latipes
ENSSDUG00000012982	-	72	61.206	ENSORLG00000023151	-	81	61.206	Oryzias_latipes
ENSSDUG00000012982	-	99	50.440	ENSORLG00000024962	-	84	50.440	Oryzias_latipes
ENSSDUG00000012982	-	72	59.432	ENSORLG00000029873	-	77	59.432	Oryzias_latipes
ENSSDUG00000012982	-	61	63.151	ENSORLG00000024028	-	77	63.151	Oryzias_latipes
ENSSDUG00000012982	-	72	61.206	ENSORLG00000027596	-	81	61.206	Oryzias_latipes
ENSSDUG00000012982	-	72	60.068	ENSORLG00000023407	-	75	60.068	Oryzias_latipes
ENSSDUG00000012982	-	61	63.418	ENSORLG00000025119	-	77	63.418	Oryzias_latipes
ENSSDUG00000012982	-	72	59.639	ENSORLG00000023674	-	79	59.639	Oryzias_latipes
ENSSDUG00000012982	-	98	50.493	ENSORLG00000027499	-	92	50.493	Oryzias_latipes
ENSSDUG00000012982	-	72	57.338	ENSORLG00000027415	-	79	57.338	Oryzias_latipes
ENSSDUG00000012982	-	100	71.068	ENSORLG00000026965	-	85	71.012	Oryzias_latipes
ENSSDUG00000012982	-	98	50.657	ENSORLG00000024952	-	83	50.657	Oryzias_latipes
ENSSDUG00000012982	-	99	51.800	ENSORLG00000023008	-	85	51.800	Oryzias_latipes
ENSSDUG00000012982	-	70	60.468	ENSORLG00000024241	-	80	60.468	Oryzias_latipes
ENSSDUG00000012982	-	99	51.649	ENSORLG00000030034	-	84	51.649	Oryzias_latipes
ENSSDUG00000012982	-	63	62.727	ENSORLG00000027523	-	84	62.727	Oryzias_latipes
ENSSDUG00000012982	-	99	51.804	ENSORLG00000021952	-	84	51.804	Oryzias_latipes
ENSSDUG00000012982	-	72	58.248	ENSORLG00000030436	-	77	58.248	Oryzias_latipes
ENSSDUG00000012982	-	70	60.351	ENSORLG00000022062	-	80	60.351	Oryzias_latipes
ENSSDUG00000012982	-	100	72.268	ENSORLG00000022632	-	85	72.268	Oryzias_latipes
ENSSDUG00000012982	-	98	49.421	ENSORLG00000026506	-	93	49.421	Oryzias_latipes
ENSSDUG00000012982	-	98	48.722	ENSORLG00000030216	-	90	48.722	Oryzias_latipes
ENSSDUG00000012982	-	93	54.040	ENSORLG00000022308	-	85	52.223	Oryzias_latipes
ENSSDUG00000012982	-	99	51.311	ENSORLG00000024838	-	80	51.311	Oryzias_latipes
ENSSDUG00000012982	-	99	48.306	ENSORLG00000030585	-	82	48.306	Oryzias_latipes
ENSSDUG00000012982	-	74	55.652	ENSORLG00000024316	-	91	55.652	Oryzias_latipes
ENSSDUG00000012982	-	61	63.551	ENSORLG00000023147	-	77	63.551	Oryzias_latipes
ENSSDUG00000012982	-	99	50.360	ENSORLG00000025916	-	84	50.360	Oryzias_latipes
ENSSDUG00000012982	-	98	48.667	ENSORLG00000027932	-	87	48.750	Oryzias_latipes
ENSSDUG00000012982	-	72	60.068	ENSORLG00000023596	-	83	60.068	Oryzias_latipes
ENSSDUG00000012982	-	72	57.452	ENSORLG00000025105	-	85	57.452	Oryzias_latipes
ENSSDUG00000012982	-	72	60.339	ENSORLG00000025100	-	78	60.339	Oryzias_latipes
ENSSDUG00000012982	-	91	53.280	ENSORLG00000025108	-	83	51.391	Oryzias_latipes
ENSSDUG00000012982	-	100	70.488	ENSORLG00000030165	-	85	70.650	Oryzias_latipes
ENSSDUG00000012982	-	97	52.976	ENSORLG00000027153	-	83	52.981	Oryzias_latipes
ENSSDUG00000012982	-	72	58.061	ENSORLG00000027877	-	79	58.061	Oryzias_latipes
ENSSDUG00000012982	-	93	52.641	ENSORLG00000022552	-	84	50.407	Oryzias_latipes
ENSSDUG00000012982	-	72	59.932	ENSORLG00000024848	-	77	59.932	Oryzias_latipes
ENSSDUG00000012982	-	66	61.881	ENSORLG00000024925	-	78	61.881	Oryzias_latipes
ENSSDUG00000012982	-	70	63.275	ENSORLG00000024198	-	80	63.275	Oryzias_latipes
ENSSDUG00000012982	-	96	51.474	ENSORLG00000022696	-	79	52.114	Oryzias_latipes
ENSSDUG00000012982	-	71	59.701	ENSORLG00000029259	-	74	59.701	Oryzias_latipes
ENSSDUG00000012982	-	65	61.845	ENSORLG00000022683	-	78	61.845	Oryzias_latipes
ENSSDUG00000012982	-	66	63.557	ENSORLG00000025220	-	79	63.557	Oryzias_latipes
ENSSDUG00000012982	-	73	58.817	ENSORLG00000024912	-	79	58.817	Oryzias_latipes
ENSSDUG00000012982	-	98	50.446	ENSORLG00000026067	-	84	50.446	Oryzias_latipes
ENSSDUG00000012982	-	99	51.230	ENSORLG00000023431	-	80	51.230	Oryzias_latipes
ENSSDUG00000012982	-	99	49.589	ENSORLG00000029044	-	91	49.589	Oryzias_latipes
ENSSDUG00000012982	-	93	53.374	ENSORLG00000022229	-	78	53.374	Oryzias_latipes
ENSSDUG00000012982	-	99	51.332	ENSORLG00000029674	-	84	51.332	Oryzias_latipes
ENSSDUG00000012982	-	93	54.167	ENSORLG00000023585	-	85	52.342	Oryzias_latipes
ENSSDUG00000012982	-	99	51.574	ENSORLG00020003988	-	84	51.574	Oryzias_latipes_hni
ENSSDUG00000012982	-	71	59.816	ENSORLG00020005114	-	82	59.816	Oryzias_latipes_hni
ENSSDUG00000012982	-	71	59.816	ENSORLG00020011789	-	74	59.816	Oryzias_latipes_hni
ENSSDUG00000012982	-	72	59.774	ENSORLG00020003377	-	74	59.774	Oryzias_latipes_hni
ENSSDUG00000012982	-	72	61.206	ENSORLG00020004934	-	78	61.206	Oryzias_latipes_hni
ENSSDUG00000012982	-	83	72.102	ENSORLG00020017439	-	93	72.055	Oryzias_latipes_hni
ENSSDUG00000012982	-	100	71.149	ENSORLG00020011809	-	85	71.093	Oryzias_latipes_hni
ENSSDUG00000012982	-	100	71.149	ENSORLG00020008167	-	85	71.093	Oryzias_latipes_hni
ENSSDUG00000012982	-	99	51.371	ENSORLG00020020735	-	84	51.371	Oryzias_latipes_hni
ENSSDUG00000012982	-	93	53.953	ENSORLG00020013601	-	85	52.142	Oryzias_latipes_hni
ENSSDUG00000012982	-	100	70.358	ENSORLG00020001553	-	85	70.089	Oryzias_latipes_hni
ENSSDUG00000012982	-	93	53.432	ENSORLG00020000745	-	85	51.657	Oryzias_latipes_hni
ENSSDUG00000012982	-	67	59.119	ENSORLG00020001657	-	94	59.119	Oryzias_latipes_hni
ENSSDUG00000012982	-	98	47.611	ENSORLG00020014566	-	94	47.666	Oryzias_latipes_hni
ENSSDUG00000012982	-	77	57.911	ENSORLG00020005485	-	81	57.676	Oryzias_latipes_hni
ENSSDUG00000012982	-	100	70.277	ENSORLG00020009070	-	86	70.008	Oryzias_latipes_hni
ENSSDUG00000012982	-	100	71.149	ENSORLG00020003499	-	86	71.059	Oryzias_latipes_hni
ENSSDUG00000012982	-	99	51.574	ENSORLG00020021168	-	84	51.574	Oryzias_latipes_hni
ENSSDUG00000012982	-	100	71.149	ENSORLG00020000947	-	85	71.093	Oryzias_latipes_hni
ENSSDUG00000012982	-	71	59.816	ENSORLG00020011308	-	73	59.816	Oryzias_latipes_hni
ENSSDUG00000012982	-	60	63.798	ENSORLG00020021845	-	76	63.798	Oryzias_latipes_hni
ENSSDUG00000012982	-	91	59.209	ENSORLG00020005141	-	79	59.209	Oryzias_latipes_hni
ENSSDUG00000012982	-	61	63.151	ENSORLG00020013042	-	77	63.151	Oryzias_latipes_hni
ENSSDUG00000012982	-	98	51.764	ENSORLG00015006303	-	82	51.764	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	47.049	ENSORLG00015022412	-	93	47.049	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	51.212	ENSORLG00015021482	-	85	51.212	Oryzias_latipes_hsok
ENSSDUG00000012982	-	69	60.190	ENSORLG00015020941	-	79	60.190	Oryzias_latipes_hsok
ENSSDUG00000012982	-	94	46.553	ENSORLG00015010438	-	96	46.553	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	47.377	ENSORLG00015009802	-	90	47.377	Oryzias_latipes_hsok
ENSSDUG00000012982	-	93	51.790	ENSORLG00015021620	-	74	51.790	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	51.001	ENSORLG00015022083	-	84	51.001	Oryzias_latipes_hsok
ENSSDUG00000012982	-	71	59.332	ENSORLG00015020866	-	80	59.264	Oryzias_latipes_hsok
ENSSDUG00000012982	-	90	72.973	ENSORLG00015019527	-	97	72.973	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	47.819	ENSORLG00015010296	-	77	48.069	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	51.131	ENSORLG00015016198	-	85	51.131	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	51.212	ENSORLG00015014929	-	91	51.212	Oryzias_latipes_hsok
ENSSDUG00000012982	-	94	50.260	ENSORLG00015011577	-	78	50.217	Oryzias_latipes_hsok
ENSSDUG00000012982	-	77	57.624	ENSORLG00015021573	-	98	57.624	Oryzias_latipes_hsok
ENSSDUG00000012982	-	93	53.779	ENSORLG00015008912	-	85	51.981	Oryzias_latipes_hsok
ENSSDUG00000012982	-	96	47.720	ENSORLG00015018042	-	92	47.720	Oryzias_latipes_hsok
ENSSDUG00000012982	-	94	46.724	ENSORLG00015005993	-	87	46.724	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	50.601	ENSORLG00015019144	-	93	50.601	Oryzias_latipes_hsok
ENSSDUG00000012982	-	99	50.962	ENSORLG00015019969	-	88	50.962	Oryzias_latipes_hsok
ENSSDUG00000012982	-	73	75.874	ENSORLG00015001210	-	82	75.874	Oryzias_latipes_hsok
ENSSDUG00000012982	-	97	46.903	ENSOMEG00000017119	-	79	46.986	Oryzias_melastigma
ENSSDUG00000012982	-	77	52.331	ENSOMEG00000011112	-	94	52.331	Oryzias_melastigma
ENSSDUG00000012982	-	70	63.349	ENSOMEG00000011861	-	91	63.349	Oryzias_melastigma
ENSSDUG00000012982	-	67	47.816	ENSOMEG00000005417	-	96	47.816	Oryzias_melastigma
ENSSDUG00000012982	-	98	70.441	ENSOMEG00000008259	-	99	70.116	Oryzias_melastigma
ENSSDUG00000012982	-	99	51.317	ENSOMEG00000022422	-	85	51.397	Oryzias_melastigma
ENSSDUG00000012982	-	82	55.196	ENSOMEG00000006056	-	93	55.196	Oryzias_melastigma
ENSSDUG00000012982	-	66	63.403	ENSOMEG00000013280	-	79	63.403	Oryzias_melastigma
ENSSDUG00000012982	-	90	60.412	ENSOMEG00000010967	-	81	60.412	Oryzias_melastigma
ENSSDUG00000012982	-	96	47.547	ENSOMEG00000007684	-	90	47.547	Oryzias_melastigma
ENSSDUG00000012982	-	86	45.472	ENSPKIG00000005143	-	89	45.755	Paramormyrops_kingsleyae
ENSSDUG00000012982	-	93	47.652	ENSPKIG00000009885	-	95	47.024	Paramormyrops_kingsleyae
ENSSDUG00000012982	-	69	58.588	ENSPFOG00000022857	-	92	58.588	Poecilia_formosa
ENSSDUG00000012982	-	71	58.087	ENSPMEG00000022292	-	81	58.087	Poecilia_mexicana
ENSSDUG00000012982	-	71	57.803	ENSPREG00000005745	-	86	57.803	Poecilia_reticulata
ENSSDUG00000012982	-	66	66.543	ENSSLDG00000016219	-	76	66.543	Seriola_lalandi_dorsalis
ENSSDUG00000012982	-	71	45.578	ENSSPUG00000017371	-	75	45.578	Sphenodon_punctatus
ENSSDUG00000012982	-	99	48.699	ENSXCOG00000000074	-	84	48.699	Xiphophorus_couchianus