EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000012996 (Gene tree)
Gene ID: 111221440
Gene Symbol: mbd1b
Alias: mbd1|wu:fi45g12
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 14011 bases
Position: chrBDQW01000088.1:7407029-7421039
Accession: 111221440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017786	MBD	PF01429.19	3.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018110	-	5470	XM_022744793	ENSSDUP00000017786	886 (aa)	XP_022600514	-

Gene Model

Click here to download ENSSDUG00000012996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000012996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000012996	mbd1b	92	75.214	ENSAPOG00000012810	mbd1b	92	77.937	Acanthochromis_polyacanthus
ENSSDUG00000012996	mbd1b	99	60.603	ENSACIG00000010590	mbd1b	88	65.589	Amphilophus_citrinellus
ENSSDUG00000012996	mbd1b	100	73.761	ENSAOCG00000020272	mbd1b	92	80.915	Amphiprion_ocellaris
ENSSDUG00000012996	mbd1b	100	73.678	ENSAPEG00000023230	mbd1b	92	80.809	Amphiprion_percula
ENSSDUG00000012996	mbd1b	100	74.860	ENSATEG00000009608	mbd1b	100	74.635	Anabas_testudineus
ENSSDUG00000012996	mbd1b	99	72.379	ENSACLG00000021383	mbd1b	90	80.105	Astatotilapia_calliptera
ENSSDUG00000012996	mbd1b	90	61.287	ENSCSEG00000009082	mbd1b	94	63.502	Cynoglossus_semilaevis
ENSSDUG00000012996	mbd1b	99	62.220	ENSCVAG00000001167	mbd1b	91	68.010	Cyprinodon_variegatus
ENSSDUG00000012996	mbd1b	92	37.813	ENSDARG00000025699	mbd1b	80	36.745	Danio_rerio
ENSSDUG00000012996	mbd1b	86	46.601	ENSELUG00000004375	mbd1b	90	46.041	Esox_lucius
ENSSDUG00000012996	mbd1b	99	61.883	ENSFHEG00000020120	mbd1b	91	67.360	Fundulus_heteroclitus
ENSSDUG00000012996	mbd1b	86	65.223	ENSGAFG00000008975	mbd1b	90	66.667	Gambusia_affinis
ENSSDUG00000012996	mbd1b	68	81.081	ENSGACG00000012106	-	99	81.081	Gasterosteus_aculeatus
ENSSDUG00000012996	mbd1b	99	73.055	ENSHBUG00000014270	mbd1b	90	80.366	Haplochromis_burtoni
ENSSDUG00000012996	mbd1b	90	57.869	ENSHCOG00000009952	mbd1b	92	59.868	Hippocampus_comes
ENSSDUG00000012996	mbd1b	86	38.670	ENSIPUG00000015243	-	85	50.633	Ictalurus_punctatus
ENSSDUG00000012996	mbd1b	94	65.677	ENSKMAG00000020760	mbd1b	91	70.558	Kryptolebias_marmoratus
ENSSDUG00000012996	mbd1b	58	44.094	ENSLACG00000002414	-	67	53.623	Latimeria_chalumnae
ENSSDUG00000012996	mbd1b	71	80.284	ENSMAMG00000023341	-	93	83.389	Mastacembelus_armatus
ENSSDUG00000012996	mbd1b	99	72.492	ENSMZEG00005010421	mbd1b	90	80.236	Maylandia_zebra
ENSSDUG00000012996	mbd1b	84	83.439	ENSMMOG00000011607	mbd1b	84	91.667	Mola_mola
ENSSDUG00000012996	mbd1b	59	49.254	ENSMODG00000001286	-	61	45.783	Monodelphis_domestica
ENSSDUG00000012996	mbd1b	100	76.983	ENSMALG00000007808	mbd1b	92	84.585	Monopterus_albus
ENSSDUG00000012996	mbd1b	99	73.619	ENSONIG00000020289	mbd1b	99	72.379	Oreochromis_niloticus
ENSSDUG00000012996	mbd1b	93	68.187	ENSORLG00000029390	mbd1b	90	71.503	Oryzias_latipes
ENSSDUG00000012996	mbd1b	99	65.955	ENSORLG00020000575	mbd1b	90	71.895	Oryzias_latipes_hni
ENSSDUG00000012996	mbd1b	99	65.881	ENSORLG00015014812	mbd1b	90	71.932	Oryzias_latipes_hsok
ENSSDUG00000012996	mbd1b	100	64.206	ENSOMEG00000023660	mbd1b	90	70.260	Oryzias_melastigma
ENSSDUG00000012996	mbd1b	86	65.177	ENSPFOG00000007511	mbd1b	90	66.230	Poecilia_formosa
ENSSDUG00000012996	mbd1b	86	64.961	ENSPLAG00000021258	mbd1b	90	65.969	Poecilia_latipinna
ENSSDUG00000012996	mbd1b	86	65.223	ENSPMEG00000024145	mbd1b	90	66.230	Poecilia_mexicana
ENSSDUG00000012996	mbd1b	94	62.139	ENSPREG00000021805	mbd1b	90	66.492	Poecilia_reticulata
ENSSDUG00000012996	mbd1b	85	39.651	ENSPNAG00000018075	mbd1b	92	38.586	Pygocentrus_nattereri
ENSSDUG00000012996	mbd1b	86	81.795	ENSSMAG00000014640	mbd1b	82	82.315	Scophthalmus_maximus
ENSSDUG00000012996	mbd1b	74	100.000	ENSSLDG00000012422	mbd1b	93	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000012996	mbd1b	100	75.338	ENSSPAG00000021447	mbd1b	91	83.268	Stegastes_partitus
ENSSDUG00000012996	mbd1b	96	64.554	ENSTRUG00000013422	mbd1b	91	68.463	Takifugu_rubripes
ENSSDUG00000012996	mbd1b	59	70.992	ENSTNIG00000007326	-	73	70.992	Tetraodon_nigroviridis
ENSSDUG00000012996	mbd1b	86	65.576	ENSXMAG00000005628	mbd1b	89	66.055	Xiphophorus_maculatus