EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013048 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: histone-lysine N-methyltransferase PRDM9-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4037 bases
Position: chrBDQW01000068.1:4284612-4288648
Accession: 111219884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017866	zf-C2H2	PF00096.26	1.5e-45	1	7
ENSSDUP00000017866	zf-C2H2	PF00096.26	1.5e-45	2	7
ENSSDUP00000017866	zf-C2H2	PF00096.26	1.5e-45	3	7
ENSSDUP00000017866	zf-C2H2	PF00096.26	1.5e-45	4	7
ENSSDUP00000017866	zf-C2H2	PF00096.26	1.5e-45	5	7
ENSSDUP00000017866	zf-C2H2	PF00096.26	1.5e-45	6	7
ENSSDUP00000017866	zf-C2H2	PF00096.26	1.5e-45	7	7
ENSSDUP00000017866	zf-met	PF12874.7	6.7e-08	1	2
ENSSDUP00000017866	zf-met	PF12874.7	6.7e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018191	-	2133	XM_022742722	ENSSDUP00000017866	710 (aa)	XP_022598443	-

Gene Model

Click here to download ENSSDUG00000013048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013048	-	69	40.541	ENSSDUG00000011170	znf236	70	40.541
ENSSDUG00000013048	-	51	41.892	ENSSDUG00000019071	-	80	41.892
ENSSDUG00000013048	-	66	31.469	ENSSDUG00000015013	-	60	32.131
ENSSDUG00000013048	-	65	33.597	ENSSDUG00000000799	-	71	34.946
ENSSDUG00000013048	-	65	34.859	ENSSDUG00000000695	-	76	30.496
ENSSDUG00000013048	-	53	40.361	ENSSDUG00000000786	-	98	53.012
ENSSDUG00000013048	-	52	36.923	ENSSDUG00000009223	zbtb41	58	36.923
ENSSDUG00000013048	-	91	32.459	ENSSDUG00000020397	prdm5	99	32.459
ENSSDUG00000013048	-	68	37.226	ENSSDUG00000014574	znf526	63	37.226
ENSSDUG00000013048	-	71	38.323	ENSSDUG00000002195	-	84	47.826
ENSSDUG00000013048	-	65	33.876	ENSSDUG00000020595	-	84	41.509
ENSSDUG00000013048	-	81	32.558	ENSSDUG00000013311	prdm14	55	32.768
ENSSDUG00000013048	-	68	51.493	ENSSDUG00000004089	-	93	51.493
ENSSDUG00000013048	-	71	36.567	ENSSDUG00000000705	-	63	36.567
ENSSDUG00000013048	-	67	45.506	ENSSDUG00000013904	-	65	45.506
ENSSDUG00000013048	-	66	35.556	ENSSDUG00000006740	-	79	33.981
ENSSDUG00000013048	-	69	35.714	ENSSDUG00000009534	-	68	35.897
ENSSDUG00000013048	-	67	43.165	ENSSDUG00000000946	-	99	38.346
ENSSDUG00000013048	-	66	41.667	ENSSDUG00000009601	-	94	41.667
ENSSDUG00000013048	-	68	40.933	ENSSDUG00000022914	-	85	40.933
ENSSDUG00000013048	-	66	41.905	ENSSDUG00000023764	-	99	45.000
ENSSDUG00000013048	-	66	37.358	ENSSDUG00000008943	-	89	37.349
ENSSDUG00000013048	-	66	32.979	ENSSDUG00000002675	znf646	88	32.979
ENSSDUG00000013048	-	53	31.343	ENSSDUG00000007752	scrt1b	82	31.343
ENSSDUG00000013048	-	65	30.696	ENSSDUG00000019932	ZNF319	86	30.696
ENSSDUG00000013048	-	67	38.667	ENSSDUG00000016450	-	67	38.667
ENSSDUG00000013048	-	66	35.505	ENSSDUG00000006463	-	86	35.505
ENSSDUG00000013048	-	67	42.857	ENSSDUG00000007336	-	89	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013048	-	99	70.816	ENSAPOG00000008319	-	97	70.816	Acanthochromis_polyacanthus
ENSSDUG00000013048	-	67	70.612	ENSAOCG00000015944	-	100	70.612	Amphiprion_ocellaris
ENSSDUG00000013048	-	67	31.503	ENSAOCG00000016897	-	66	31.503	Amphiprion_ocellaris
ENSSDUG00000013048	-	67	70.612	ENSAOCG00000014769	-	96	70.612	Amphiprion_ocellaris
ENSSDUG00000013048	-	68	40.719	ENSATEG00000018931	-	97	40.719	Anabas_testudineus
ENSSDUG00000013048	-	65	40.854	ENSCVAG00000015616	-	74	40.854	Cyprinodon_variegatus
ENSSDUG00000013048	-	52	37.885	ENSEBUG00000002290	-	55	37.885	Eptatretus_burgeri
ENSSDUG00000013048	-	68	32.765	ENSELUG00000001909	-	79	32.738	Esox_lucius
ENSSDUG00000013048	-	65	48.000	ENSELUG00000024007	-	86	48.000	Esox_lucius
ENSSDUG00000013048	-	68	42.073	ENSLBEG00000001132	-	99	41.667	Labrus_bergylta
ENSSDUG00000013048	-	68	41.085	ENSLOCG00000004208	-	99	41.085	Lepisosteus_oculatus
ENSSDUG00000013048	-	88	39.205	ENSMAMG00000017939	-	97	41.135	Mastacembelus_armatus
ENSSDUG00000013048	-	52	40.000	ENSMZEG00005013907	-	77	31.646	Maylandia_zebra
ENSSDUG00000013048	-	99	73.717	ENSONIG00000007967	-	96	73.717	Oreochromis_niloticus
ENSSDUG00000013048	-	67	31.776	ENSORLG00000002268	-	94	31.776	Oryzias_latipes
ENSSDUG00000013048	-	53	45.946	ENSORLG00020019227	-	56	45.946	Oryzias_latipes_hni
ENSSDUG00000013048	-	68	35.519	ENSPMGG00000006928	-	55	35.519	Periophthalmus_magnuspinnatus
ENSSDUG00000013048	-	55	44.961	ENSPMGG00000002661	-	88	44.961	Periophthalmus_magnuspinnatus
ENSSDUG00000013048	-	66	41.250	ENSPMGG00000009571	-	77	41.250	Periophthalmus_magnuspinnatus
ENSSDUG00000013048	-	67	39.506	ENSPFOG00000018860	-	99	39.506	Poecilia_formosa
ENSSDUG00000013048	-	58	38.994	ENSPFOG00000009491	-	67	38.994	Poecilia_formosa
ENSSDUG00000013048	-	58	38.994	ENSPMEG00000024117	-	67	38.994	Poecilia_mexicana
ENSSDUG00000013048	-	99	76.327	ENSSMAG00000008308	-	98	76.327	Scophthalmus_maximus
ENSSDUG00000013048	-	69	37.736	ENSSMAG00000013291	-	92	41.667	Scophthalmus_maximus
ENSSDUG00000013048	-	99	92.025	ENSSLDG00000011849	-	97	92.025	Seriola_lalandi_dorsalis
ENSSDUG00000013048	-	67	46.789	ENSXETG00000012506	znf91	100	46.789	Xenopus_tropicalis
ENSSDUG00000013048	-	59	41.727	ENSXCOG00000020768	-	92	41.727	Xiphophorus_couchianus
ENSSDUG00000013048	-	52	44.828	ENSXCOG00000000254	-	92	44.828	Xiphophorus_couchianus