EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013058 (Gene tree)
Gene ID: 111217079
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 26235 bases
Position: chrBDQW01000040.1:2239070-2265304
Accession: 111217079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017880	Exo_endo_phos	PF03372.23	8.7e-14	1	1
ENSSDUP00000017880	DUF1866	PF08952.11	9.3e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018205	-	8082	XM_022738777	ENSSDUP00000017880	1641 (aa)	XP_022594498	-

Gene Model

Click here to download ENSSDUG00000013058's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00562	Inositol phosphate metabolism	KEGG
sdu01100	Metabolic pathways	KEGG
sdu04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013058	synj1	88	66.394	ENSG00000159082	SYNJ1	100	83.214	Homo_sapiens
ENSSDUG00000013058	synj1	100	90.097	ENSAPOG00000002809	synj1	100	89.855	Acanthochromis_polyacanthus
ENSSDUG00000013058	synj1	89	61.964	ENSAMEG00000015028	SYNJ1	67	75.975	Ailuropoda_melanoleuca
ENSSDUG00000013058	synj1	99	83.814	ENSACIG00000008857	synj1	99	90.244	Amphilophus_citrinellus
ENSSDUG00000013058	synj1	100	90.571	ENSAOCG00000009835	synj1	99	92.802	Amphiprion_ocellaris
ENSSDUG00000013058	synj1	100	91.189	ENSAPEG00000021010	synj1	100	90.766	Amphiprion_percula
ENSSDUG00000013058	synj1	100	88.815	ENSATEG00000002306	synj1	100	88.513	Anabas_testudineus
ENSSDUG00000013058	synj1	98	56.789	ENSAPLG00000011832	SYNJ1	69	75.113	Anas_platyrhynchos
ENSSDUG00000013058	synj1	74	70.492	ENSACAG00000003006	-	84	76.818	Anolis_carolinensis
ENSSDUG00000013058	synj1	88	62.850	ENSANAG00000027325	SYNJ1	84	75.543	Aotus_nancymaae
ENSSDUG00000013058	synj1	100	88.282	ENSACLG00000002255	synj1	100	88.403	Astatotilapia_calliptera
ENSSDUG00000013058	synj1	99	75.990	ENSAMXG00000008208	synj1	67	89.411	Astyanax_mexicanus
ENSSDUG00000013058	synj1	97	61.108	ENSBTAG00000003063	SYNJ1	84	75.695	Bos_taurus
ENSSDUG00000013058	synj1	89	64.957	ENSCJAG00000009187	SYNJ1	84	75.566	Callithrix_jacchus
ENSSDUG00000013058	synj1	88	63.291	ENSCAFG00000009041	SYNJ1	99	67.116	Canis_familiaris
ENSSDUG00000013058	synj1	89	65.703	ENSCAFG00020025776	SYNJ1	85	66.740	Canis_lupus_dingo
ENSSDUG00000013058	synj1	96	62.194	ENSCHIG00000005095	SYNJ1	85	66.813	Capra_hircus
ENSSDUG00000013058	synj1	89	65.074	ENSTSYG00000014541	SYNJ1	85	75.248	Carlito_syrichta
ENSSDUG00000013058	synj1	68	64.249	ENSCAPG00000014483	SYNJ1	75	66.038	Cavia_aperea
ENSSDUG00000013058	synj1	98	59.468	ENSCPOG00000012182	SYNJ1	83	75.658	Cavia_porcellus
ENSSDUG00000013058	synj1	88	65.599	ENSCCAG00000020825	SYNJ1	84	75.543	Cebus_capucinus
ENSSDUG00000013058	synj1	88	63.915	ENSCATG00000033891	SYNJ1	86	76.433	Cercocebus_atys
ENSSDUG00000013058	synj1	91	61.026	ENSCLAG00000009796	SYNJ1	100	82.878	Chinchilla_lanigera
ENSSDUG00000013058	synj1	77	67.391	ENSCSAG00000009654	SYNJ1	84	75.610	Chlorocebus_sabaeus
ENSSDUG00000013058	synj1	74	71.933	ENSCHOG00000012390	SYNJ1	54	71.933	Choloepus_hoffmanni
ENSSDUG00000013058	synj1	73	71.267	ENSCPBG00000006402	SYNJ1	88	76.492	Chrysemys_picta_bellii
ENSSDUG00000013058	synj1	88	66.166	ENSCANG00000031359	SYNJ1	85	75.610	Colobus_angolensis_palliatus
ENSSDUG00000013058	synj1	88	65.191	ENSCGRG00001010861	Synj1	83	75.386	Cricetulus_griseus_chok1gshd
ENSSDUG00000013058	synj1	77	67.144	ENSCGRG00000015749	Synj1	100	82.158	Cricetulus_griseus_crigri
ENSSDUG00000013058	synj1	76	89.644	ENSCSEG00000019614	synj1	98	91.819	Cynoglossus_semilaevis
ENSSDUG00000013058	synj1	95	84.347	ENSCVAG00000019250	synj1	99	83.867	Cyprinodon_variegatus
ENSSDUG00000013058	synj1	80	83.183	ENSDARG00000025011	synj1	100	78.102	Danio_rerio
ENSSDUG00000013058	synj1	88	59.828	ENSDNOG00000010732	SYNJ1	71	72.321	Dasypus_novemcinctus
ENSSDUG00000013058	synj1	66	77.061	ENSETEG00000018674	SYNJ1	60	77.061	Echinops_telfairi
ENSSDUG00000013058	synj1	88	66.325	ENSEASG00005006287	SYNJ1	96	78.730	Equus_asinus_asinus
ENSSDUG00000013058	synj1	88	66.416	ENSECAG00000004829	SYNJ1	99	68.116	Equus_caballus
ENSSDUG00000013058	synj1	80	70.632	ENSEEUG00000005150	SYNJ1	60	70.632	Erinaceus_europaeus
ENSSDUG00000013058	synj1	100	71.172	ENSELUG00000009731	synj1	94	82.613	Esox_lucius
ENSSDUG00000013058	synj1	88	66.210	ENSFCAG00000012498	SYNJ1	99	66.987	Felis_catus
ENSSDUG00000013058	synj1	78	50.898	ENSFALG00000004680	SYNJ1	62	69.728	Ficedula_albicollis
ENSSDUG00000013058	synj1	77	67.895	ENSFDAG00000016818	SYNJ1	100	83.309	Fukomys_damarensis
ENSSDUG00000013058	synj1	99	81.655	ENSFHEG00000017689	synj1	99	82.415	Fundulus_heteroclitus
ENSSDUG00000013058	synj1	64	86.108	ENSGMOG00000014852	synj1	81	86.876	Gadus_morhua
ENSSDUG00000013058	synj1	90	64.400	ENSGALG00000034317	SYNJ1	84	66.084	Gallus_gallus
ENSSDUG00000013058	synj1	99	84.714	ENSGAFG00000019466	synj1	100	84.348	Gambusia_affinis
ENSSDUG00000013058	synj1	79	86.241	ENSGACG00000020575	synj1	99	86.511	Gasterosteus_aculeatus
ENSSDUG00000013058	synj1	98	61.651	ENSGAGG00000022523	SYNJ1	82	76.481	Gopherus_agassizii
ENSSDUG00000013058	synj1	88	63.514	ENSGGOG00000015945	SYNJ1	99	68.632	Gorilla_gorilla
ENSSDUG00000013058	synj1	100	86.910	ENSHBUG00000007774	synj1	94	94.536	Haplochromis_burtoni
ENSSDUG00000013058	synj1	89	63.389	ENSHGLG00000006420	SYNJ1	100	82.590	Heterocephalus_glaber_female
ENSSDUG00000013058	synj1	89	63.389	ENSHGLG00100012591	SYNJ1	100	82.590	Heterocephalus_glaber_male
ENSSDUG00000013058	synj1	79	79.313	ENSHCOG00000012774	synj1	96	79.693	Hippocampus_comes
ENSSDUG00000013058	synj1	88	62.748	ENSSTOG00000015806	SYNJ1	84	75.700	Ictidomys_tridecemlineatus
ENSSDUG00000013058	synj1	88	58.788	ENSJJAG00000020168	Synj1	69	70.641	Jaculus_jaculus
ENSSDUG00000013058	synj1	100	82.271	ENSKMAG00000004221	synj1	93	87.840	Kryptolebias_marmoratus
ENSSDUG00000013058	synj1	90	87.483	ENSLBEG00000015081	synj1	99	87.441	Labrus_bergylta
ENSSDUG00000013058	synj1	99	59.178	ENSLACG00000005928	SYNJ1	71	75.426	Latimeria_chalumnae
ENSSDUG00000013058	synj1	95	64.893	ENSLOCG00000009230	synj1	73	82.557	Lepisosteus_oculatus
ENSSDUG00000013058	synj1	96	62.309	ENSLAFG00000011806	SYNJ1	70	75.067	Loxodonta_africana
ENSSDUG00000013058	synj1	86	64.833	ENSMFAG00000018883	SYNJ1	84	74.373	Macaca_fascicularis
ENSSDUG00000013058	synj1	88	63.802	ENSMMUG00000004624	SYNJ1	84	75.790	Macaca_mulatta
ENSSDUG00000013058	synj1	88	65.962	ENSMNEG00000040077	SYNJ1	79	75.610	Macaca_nemestrina
ENSSDUG00000013058	synj1	88	65.894	ENSMLEG00000037029	SYNJ1	85	75.519	Mandrillus_leucophaeus
ENSSDUG00000013058	synj1	100	90.413	ENSMAMG00000013404	synj1	100	90.109	Mastacembelus_armatus
ENSSDUG00000013058	synj1	100	88.282	ENSMZEG00005024358	synj1	100	92.133	Maylandia_zebra
ENSSDUG00000013058	synj1	90	62.549	ENSMGAG00000014522	SYNJ1	84	63.837	Meleagris_gallopavo
ENSSDUG00000013058	synj1	77	67.445	ENSMAUG00000009743	Synj1	100	82.302	Mesocricetus_auratus
ENSSDUG00000013058	synj1	88	65.959	ENSMICG00000034953	SYNJ1	86	76.524	Microcebus_murinus
ENSSDUG00000013058	synj1	79	86.986	ENSMMOG00000010203	synj1	85	93.081	Mola_mola
ENSSDUG00000013058	synj1	79	65.556	ENSMODG00000021073	SYNJ1	82	72.284	Monodelphis_domestica
ENSSDUG00000013058	synj1	100	86.842	ENSMALG00000014015	synj1	100	87.201	Monopterus_albus
ENSSDUG00000013058	synj1	89	62.313	MGP_CAROLIEiJ_G0020951	Synj1	100	83.022	Mus_caroli
ENSSDUG00000013058	synj1	96	59.806	ENSMUSG00000022973	Synj1	100	83.022	Mus_musculus
ENSSDUG00000013058	synj1	96	61.070	MGP_PahariEiJ_G0016656	Synj1	100	82.734	Mus_pahari
ENSSDUG00000013058	synj1	96	59.756	MGP_SPRETEiJ_G0021857	Synj1	100	82.878	Mus_spretus
ENSSDUG00000013058	synj1	89	61.818	ENSMPUG00000001153	SYNJ1	70	75.383	Mustela_putorius_furo
ENSSDUG00000013058	synj1	57	57.955	ENSMLUG00000005764	-	54	72.049	Myotis_lucifugus
ENSSDUG00000013058	synj1	78	66.149	ENSNGAG00000000453	Synj1	100	82.446	Nannospalax_galili
ENSSDUG00000013058	synj1	100	81.669	ENSNBRG00000011936	synj1	99	84.974	Neolamprologus_brichardi
ENSSDUG00000013058	synj1	76	62.189	ENSNLEG00000003734	SYNJ1	98	64.347	Nomascus_leucogenys
ENSSDUG00000013058	synj1	62	72.439	ENSMEUG00000004158	-	65	63.375	Notamacropus_eugenii
ENSSDUG00000013058	synj1	81	77.333	ENSOPRG00000013602	SYNJ1	63	77.333	Ochotona_princeps
ENSSDUG00000013058	synj1	88	83.411	ENSONIG00000004667	synj1	78	94.545	Oreochromis_niloticus
ENSSDUG00000013058	synj1	72	66.667	ENSOANG00000006929	SYNJ1	69	74.299	Ornithorhynchus_anatinus
ENSSDUG00000013058	synj1	89	61.206	ENSOCUG00000001420	SYNJ1	67	77.438	Oryctolagus_cuniculus
ENSSDUG00000013058	synj1	99	83.112	ENSORLG00000004320	synj1	100	81.159	Oryzias_latipes
ENSSDUG00000013058	synj1	80	85.595	ENSORLG00020011994	synj1	98	81.236	Oryzias_latipes_hni
ENSSDUG00000013058	synj1	98	84.735	ENSORLG00015018077	synj1	95	83.970	Oryzias_latipes_hsok
ENSSDUG00000013058	synj1	98	83.853	ENSOMEG00000014322	synj1	99	85.938	Oryzias_melastigma
ENSSDUG00000013058	synj1	88	60.000	ENSOGAG00000006010	SYNJ1	68	72.442	Otolemur_garnettii
ENSSDUG00000013058	synj1	97	58.767	ENSOARG00000013414	SYNJ1	69	74.508	Ovis_aries
ENSSDUG00000013058	synj1	88	66.303	ENSPPAG00000026784	SYNJ1	85	75.700	Pan_paniscus
ENSSDUG00000013058	synj1	88	66.278	ENSPPRG00000023469	SYNJ1	99	66.987	Panthera_pardus
ENSSDUG00000013058	synj1	88	66.347	ENSPTIG00000007930	SYNJ1	99	67.061	Panthera_tigris_altaica
ENSSDUG00000013058	synj1	88	63.109	ENSPTRG00000023787	SYNJ1	86	76.524	Pan_troglodytes
ENSSDUG00000013058	synj1	88	66.303	ENSPTRG00000048135	-	86	76.524	Pan_troglodytes
ENSSDUG00000013058	synj1	88	65.985	ENSPANG00000022531	SYNJ1	85	75.610	Papio_anubis
ENSSDUG00000013058	synj1	66	86.380	ENSPKIG00000022603	synj1	89	86.106	Paramormyrops_kingsleyae
ENSSDUG00000013058	synj1	94	90.985	ENSPMGG00000016831	synj1	99	90.955	Periophthalmus_magnuspinnatus
ENSSDUG00000013058	synj1	77	70.488	ENSPEMG00000018767	Synj1	100	82.878	Peromyscus_maniculatus_bairdii
ENSSDUG00000013058	synj1	88	64.247	ENSPCIG00000016372	SYNJ1	82	75.923	Phascolarctos_cinereus
ENSSDUG00000013058	synj1	79	89.755	ENSPFOG00000016886	synj1	100	89.358	Poecilia_formosa
ENSSDUG00000013058	synj1	99	84.601	ENSPLAG00000017559	synj1	100	87.852	Poecilia_latipinna
ENSSDUG00000013058	synj1	99	84.420	ENSPMEG00000007643	synj1	100	83.998	Poecilia_mexicana
ENSSDUG00000013058	synj1	99	85.009	ENSPREG00000012412	synj1	100	84.704	Poecilia_reticulata
ENSSDUG00000013058	synj1	81	65.962	ENSPPYG00000011365	SYNJ1	79	75.429	Pongo_abelii
ENSSDUG00000013058	synj1	51	85.714	ENSPCAG00000009906	SYNJ1	55	85.714	Procavia_capensis
ENSSDUG00000013058	synj1	81	76.884	ENSPCOG00000024841	SYNJ1	83	74.820	Propithecus_coquereli
ENSSDUG00000013058	synj1	67	71.763	ENSPVAG00000000892	SYNJ1	69	72.142	Pteropus_vampyrus
ENSSDUG00000013058	synj1	100	82.836	ENSPNYG00000022989	synj1	100	89.970	Pundamilia_nyererei
ENSSDUG00000013058	synj1	66	89.580	ENSPNAG00000021119	synj1	91	88.566	Pygocentrus_nattereri
ENSSDUG00000013058	synj1	96	59.295	ENSRNOG00000002051	Synj1	85	75.766	Rattus_norvegicus
ENSSDUG00000013058	synj1	96	62.155	ENSRBIG00000034477	SYNJ1	85	75.519	Rhinopithecus_bieti
ENSSDUG00000013058	synj1	96	63.741	ENSRROG00000039256	SYNJ1	85	75.610	Rhinopithecus_roxellana
ENSSDUG00000013058	synj1	88	65.621	ENSSBOG00000021001	SYNJ1	84	75.453	Saimiri_boliviensis_boliviensis
ENSSDUG00000013058	synj1	90	61.155	ENSSHAG00000008538	SYNJ1	83	66.617	Sarcophilus_harrisii
ENSSDUG00000013058	synj1	90	79.416	ENSSFOG00015006095	synj1	100	73.238	Scleropages_formosus
ENSSDUG00000013058	synj1	100	82.445	ENSSMAG00000018066	synj1	98	89.013	Scophthalmus_maximus
ENSSDUG00000013058	synj1	100	99.086	ENSSLDG00000021406	synj1	100	99.086	Seriola_lalandi_dorsalis
ENSSDUG00000013058	synj1	98	60.528	ENSSPUG00000012552	SYNJ1	71	77.015	Sphenodon_punctatus
ENSSDUG00000013058	synj1	90	93.365	ENSSPAG00000017029	synj1	93	93.315	Stegastes_partitus
ENSSDUG00000013058	synj1	96	90.978	ENSSPAG00000006812	SYNJ1	100	90.726	Stegastes_partitus
ENSSDUG00000013058	synj1	88	64.734	ENSSSCG00000012035	SYNJ1	99	66.815	Sus_scrofa
ENSSDUG00000013058	synj1	99	59.774	ENSTGUG00000013445	SYNJ1	70	75.067	Taeniopygia_guttata
ENSSDUG00000013058	synj1	99	80.356	ENSTRUG00000006907	synj1	99	80.809	Takifugu_rubripes
ENSSDUG00000013058	synj1	86	76.162	ENSTNIG00000009940	synj1	83	88.489	Tetraodon_nigroviridis
ENSSDUG00000013058	synj1	83	83.544	ENSTBEG00000016298	SYNJ1	56	83.544	Tupaia_belangeri
ENSSDUG00000013058	synj1	91	76.943	ENSTTRG00000002222	SYNJ1	71	68.841	Tursiops_truncatus
ENSSDUG00000013058	synj1	96	62.084	ENSUAMG00000018606	SYNJ1	98	79.725	Ursus_americanus
ENSSDUG00000013058	synj1	86	76.065	ENSUMAG00000018419	SYNJ1	99	79.153	Ursus_maritimus
ENSSDUG00000013058	synj1	88	85.714	ENSVPAG00000001241	SYNJ1	67	85.714	Vicugna_pacos
ENSSDUG00000013058	synj1	89	63.456	ENSVVUG00000023125	SYNJ1	84	75.429	Vulpes_vulpes
ENSSDUG00000013058	synj1	89	60.103	ENSXETG00000009899	synj1	92	60.115	Xenopus_tropicalis
ENSSDUG00000013058	synj1	79	88.692	ENSXCOG00000011896	synj1	99	88.737	Xiphophorus_couchianus
ENSSDUG00000013058	synj1	99	82.580	ENSXMAG00000017524	synj1	100	86.497	Xiphophorus_maculatus