EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013065 (Gene tree)
Gene ID: 111236727
Gene Symbol: raver2
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 78695 bases
Position: chrBDQW01000002.1:8988376-9067070
Accession: 111236727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017883	RRM_1	PF00076.22	6.1e-35	1	3
ENSSDUP00000017883	RRM_1	PF00076.22	6.1e-35	2	3
ENSSDUP00000017883	RRM_1	PF00076.22	6.1e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018208	-	2731	XM_022765616	ENSSDUP00000017883	878 (aa)	XP_022621337	-

Gene Model

Click here to download ENSSDUG00000013065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013065	raver2	77	43.750	ENSSDUG00000021063	raver1	74	47.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013065	raver2	69	48.693	ENSG00000162437	RAVER2	92	42.424	Homo_sapiens
ENSSDUG00000013065	raver2	100	89.002	ENSAPOG00000002766	raver2	100	89.683	Acanthochromis_polyacanthus
ENSSDUG00000013065	raver2	67	48.339	ENSAMEG00000015178	RAVER2	85	49.476	Ailuropoda_melanoleuca
ENSSDUG00000013065	raver2	72	95.223	ENSATEG00000019679	raver2	99	94.586	Anabas_testudineus
ENSSDUG00000013065	raver2	68	44.643	ENSAPLG00000013160	RAVER2	92	44.588	Anas_platyrhynchos
ENSSDUG00000013065	raver2	94	40.334	ENSACAG00000008443	RAVER2	89	43.847	Anolis_carolinensis
ENSSDUG00000013065	raver2	69	48.142	ENSANAG00000025857	RAVER2	80	49.063	Aotus_nancymaae
ENSSDUG00000013065	raver2	100	92.978	ENSACLG00000001840	raver2	100	92.978	Astatotilapia_calliptera
ENSSDUG00000013065	raver2	100	61.761	ENSAMXG00000010570	raver2	100	62.486	Astyanax_mexicanus
ENSSDUG00000013065	raver2	72	46.490	ENSBTAG00000030686	RAVER2	84	49.063	Bos_taurus
ENSSDUG00000013065	raver2	69	47.222	ENSCJAG00000016724	RAVER2	79	47.863	Callithrix_jacchus
ENSSDUG00000013065	raver2	60	45.338	ENSCAFG00000018617	RAVER2	83	46.408	Canis_familiaris
ENSSDUG00000013065	raver2	69	47.987	ENSCAFG00020018120	RAVER2	79	49.066	Canis_lupus_dingo
ENSSDUG00000013065	raver2	69	48.052	ENSCHIG00000005514	RAVER2	80	49.147	Capra_hircus
ENSSDUG00000013065	raver2	67	46.256	ENSTSYG00000006019	RAVER2	74	48.263	Carlito_syrichta
ENSSDUG00000013065	raver2	61	41.561	ENSCAPG00000013527	RAVER2	95	55.060	Cavia_aperea
ENSSDUG00000013065	raver2	69	47.967	ENSCCAG00000029834	RAVER2	79	48.885	Cebus_capucinus
ENSSDUG00000013065	raver2	69	47.377	ENSCATG00000040658	RAVER2	91	48.677	Cercocebus_atys
ENSSDUG00000013065	raver2	65	44.056	ENSCLAG00000006590	RAVER2	59	57.440	Chinchilla_lanigera
ENSSDUG00000013065	raver2	67	47.404	ENSCSAG00000001350	RAVER2	84	48.677	Chlorocebus_sabaeus
ENSSDUG00000013065	raver2	69	45.779	ENSCHOG00000007668	RAVER2	79	46.416	Choloepus_hoffmanni
ENSSDUG00000013065	raver2	79	46.264	ENSCPBG00000001015	RAVER2	89	45.034	Chrysemys_picta_bellii
ENSSDUG00000013065	raver2	69	48.197	ENSCANG00000042311	RAVER2	85	48.630	Colobus_angolensis_palliatus
ENSSDUG00000013065	raver2	71	45.866	ENSCGRG00001011852	Raver2	83	48.414	Cricetulus_griseus_chok1gshd
ENSSDUG00000013065	raver2	75	83.861	ENSCVAG00000002687	raver2	99	83.535	Cyprinodon_variegatus
ENSSDUG00000013065	raver2	100	63.889	ENSDARG00000075034	raver2	97	63.647	Danio_rerio
ENSSDUG00000013065	raver2	69	47.735	ENSDNOG00000012130	RAVER2	80	48.635	Dasypus_novemcinctus
ENSSDUG00000013065	raver2	72	47.567	ENSDORG00000002498	Raver2	64	53.138	Dipodomys_ordii
ENSSDUG00000013065	raver2	64	58.605	ENSETEG00000000706	RAVER2	77	58.605	Echinops_telfairi
ENSSDUG00000013065	raver2	67	48.093	ENSEASG00005008158	RAVER2	86	48.365	Equus_asinus_asinus
ENSSDUG00000013065	raver2	67	48.425	ENSECAG00000022014	RAVER2	86	48.877	Equus_caballus
ENSSDUG00000013065	raver2	53	67.453	ENSELUG00000022384	raver2	97	78.388	Esox_lucius
ENSSDUG00000013065	raver2	69	48.377	ENSFCAG00000022781	RAVER2	80	49.488	Felis_catus
ENSSDUG00000013065	raver2	64	46.208	ENSFDAG00000010721	RAVER2	85	45.043	Fukomys_damarensis
ENSSDUG00000013065	raver2	100	85.860	ENSFHEG00000001322	raver2	100	85.747	Fundulus_heteroclitus
ENSSDUG00000013065	raver2	59	86.000	ENSGMOG00000013535	raver2	79	86.000	Gadus_morhua
ENSSDUG00000013065	raver2	72	45.455	ENSGALG00000033759	RAVER2	54	56.490	Gallus_gallus
ENSSDUG00000013065	raver2	100	86.230	ENSGAFG00000008577	raver2	100	86.456	Gambusia_affinis
ENSSDUG00000013065	raver2	73	80.989	ENSGACG00000007122	raver2	99	80.401	Gasterosteus_aculeatus
ENSSDUG00000013065	raver2	77	46.009	ENSGAGG00000018767	RAVER2	95	45.101	Gopherus_agassizii
ENSSDUG00000013065	raver2	69	46.634	ENSGGOG00000016447	RAVER2	82	47.841	Gorilla_gorilla
ENSSDUG00000013065	raver2	100	92.978	ENSHBUG00000022983	raver2	100	92.978	Haplochromis_burtoni
ENSSDUG00000013065	raver2	66	44.574	ENSHGLG00100006640	RAVER2	94	58.982	Heterocephalus_glaber_male
ENSSDUG00000013065	raver2	100	80.408	ENSHCOG00000005933	raver2	100	80.181	Hippocampus_comes
ENSSDUG00000013065	raver2	100	60.894	ENSIPUG00000007082	raver2	100	60.447	Ictalurus_punctatus
ENSSDUG00000013065	raver2	69	49.355	ENSJJAG00000000374	Raver2	84	49.322	Jaculus_jaculus
ENSSDUG00000013065	raver2	77	85.903	ENSKMAG00000011656	raver2	100	85.756	Kryptolebias_marmoratus
ENSSDUG00000013065	raver2	88	41.000	ENSLACG00000005188	RAVER2	51	55.614	Latimeria_chalumnae
ENSSDUG00000013065	raver2	100	58.605	ENSLOCG00000006773	raver2	99	58.605	Lepisosteus_oculatus
ENSSDUG00000013065	raver2	65	47.059	ENSLAFG00000012508	RAVER2	84	48.358	Loxodonta_africana
ENSSDUG00000013065	raver2	68	48.112	ENSMFAG00000031436	RAVER2	84	47.802	Macaca_fascicularis
ENSSDUG00000013065	raver2	68	48.112	ENSMMUG00000018565	RAVER2	91	48.677	Macaca_mulatta
ENSSDUG00000013065	raver2	68	48.112	ENSMNEG00000033127	RAVER2	91	48.677	Macaca_nemestrina
ENSSDUG00000013065	raver2	65	46.435	ENSMLEG00000036310	RAVER2	84	47.706	Mandrillus_leucophaeus
ENSSDUG00000013065	raver2	100	92.978	ENSMZEG00005014386	raver2	100	92.978	Maylandia_zebra
ENSSDUG00000013065	raver2	68	44.878	ENSMGAG00000011806	RAVER2	92	45.130	Meleagris_gallopavo
ENSSDUG00000013065	raver2	72	45.191	ENSMAUG00000004248	Raver2	83	47.862	Mesocricetus_auratus
ENSSDUG00000013065	raver2	69	48.371	ENSMICG00000029259	RAVER2	80	49.231	Microcebus_murinus
ENSSDUG00000013065	raver2	70	44.757	ENSMOCG00000018087	Raver2	83	47.579	Microtus_ochrogaster
ENSSDUG00000013065	raver2	68	48.841	ENSMODG00000001242	RAVER2	79	49.327	Monodelphis_domestica
ENSSDUG00000013065	raver2	100	92.647	ENSMALG00000018093	raver2	97	91.006	Monopterus_albus
ENSSDUG00000013065	raver2	71	45.866	MGP_CAROLIEiJ_G0026202	Raver2	92	56.840	Mus_caroli
ENSSDUG00000013065	raver2	71	45.866	ENSMUSG00000035275	Raver2	92	57.075	Mus_musculus
ENSSDUG00000013065	raver2	71	45.736	MGP_PahariEiJ_G0028539	Raver2	92	56.501	Mus_pahari
ENSSDUG00000013065	raver2	71	45.866	MGP_SPRETEiJ_G0027171	Raver2	92	57.075	Mus_spretus
ENSSDUG00000013065	raver2	67	49.003	ENSMPUG00000000717	RAVER2	85	50.175	Mustela_putorius_furo
ENSSDUG00000013065	raver2	61	47.715	ENSMLUG00000007699	RAVER2	91	47.723	Myotis_lucifugus
ENSSDUG00000013065	raver2	69	47.191	ENSNGAG00000000905	Raver2	81	49.313	Nannospalax_galili
ENSSDUG00000013065	raver2	66	47.099	ENSNLEG00000015145	RAVER2	84	48.014	Nomascus_leucogenys
ENSSDUG00000013065	raver2	75	40.593	ENSODEG00000005253	RAVER2	68	47.758	Octodon_degus
ENSSDUG00000013065	raver2	67	93.750	ENSONIG00000008808	raver2	92	93.750	Oreochromis_niloticus
ENSSDUG00000013065	raver2	68	46.091	ENSOANG00000008327	-	63	57.641	Ornithorhynchus_anatinus
ENSSDUG00000013065	raver2	69	46.341	ENSOCUG00000006221	RAVER2	85	46.080	Oryctolagus_cuniculus
ENSSDUG00000013065	raver2	100	86.991	ENSORLG00000010073	raver2	100	85.747	Oryzias_latipes
ENSSDUG00000013065	raver2	100	87.104	ENSORLG00020010822	raver2	100	86.086	Oryzias_latipes_hni
ENSSDUG00000013065	raver2	100	87.330	ENSOMEG00000007789	raver2	100	86.765	Oryzias_melastigma
ENSSDUG00000013065	raver2	65	47.260	ENSOGAG00000011157	RAVER2	84	48.188	Otolemur_garnettii
ENSSDUG00000013065	raver2	69	48.214	ENSOARG00000010030	RAVER2	80	49.317	Ovis_aries
ENSSDUG00000013065	raver2	69	48.039	ENSPPAG00000039189	RAVER2	82	49.313	Pan_paniscus
ENSSDUG00000013065	raver2	69	48.377	ENSPPRG00000023350	RAVER2	80	49.488	Panthera_pardus
ENSSDUG00000013065	raver2	65	47.504	ENSPTIG00000009389	RAVER2	74	48.639	Panthera_tigris_altaica
ENSSDUG00000013065	raver2	69	47.213	ENSPTRG00000000824	RAVER2	85	48.448	Pan_troglodytes
ENSSDUG00000013065	raver2	68	47.650	ENSPANG00000003396	RAVER2	79	48.983	Papio_anubis
ENSSDUG00000013065	raver2	100	50.556	ENSPKIG00000019357	raver2	91	66.189	Paramormyrops_kingsleyae
ENSSDUG00000013065	raver2	70	40.441	ENSPSIG00000010074	RAVER2	69	54.381	Pelodiscus_sinensis
ENSSDUG00000013065	raver2	71	47.261	ENSPEMG00000001332	Raver2	68	53.390	Peromyscus_maniculatus_bairdii
ENSSDUG00000013065	raver2	78	46.110	ENSPCIG00000020336	RAVER2	81	49.502	Phascolarctos_cinereus
ENSSDUG00000013065	raver2	100	86.257	ENSPFOG00000009386	raver2	99	86.816	Poecilia_formosa
ENSSDUG00000013065	raver2	100	86.907	ENSPLAG00000005632	raver2	100	87.472	Poecilia_latipinna
ENSSDUG00000013065	raver2	100	87.133	ENSPMEG00000000509	raver2	100	87.698	Poecilia_mexicana
ENSSDUG00000013065	raver2	100	86.682	ENSPREG00000020514	raver2	100	87.246	Poecilia_reticulata
ENSSDUG00000013065	raver2	69	47.727	ENSPCOG00000028379	RAVER2	79	49.063	Propithecus_coquereli
ENSSDUG00000013065	raver2	65	46.988	ENSPVAG00000007172	RAVER2	85	47.550	Pteropus_vampyrus
ENSSDUG00000013065	raver2	77	58.949	ENSPNAG00000000962	raver2	85	76.923	Pygocentrus_nattereri
ENSSDUG00000013065	raver2	71	46.322	ENSRNOG00000023812	Raver2	86	47.695	Rattus_norvegicus
ENSSDUG00000013065	raver2	52	54.130	ENSRBIG00000044090	RAVER2	72	54.113	Rhinopithecus_bieti
ENSSDUG00000013065	raver2	66	48.311	ENSRROG00000041867	RAVER2	76	49.107	Rhinopithecus_roxellana
ENSSDUG00000013065	raver2	67	48.739	ENSSBOG00000023706	RAVER2	85	49.206	Saimiri_boliviensis_boliviensis
ENSSDUG00000013065	raver2	65	48.365	ENSSHAG00000014568	RAVER2	87	48.021	Sarcophilus_harrisii
ENSSDUG00000013065	raver2	85	50.587	ENSSFOG00015013015	raver2	54	64.548	Scleropages_formosus
ENSSDUG00000013065	raver2	100	89.426	ENSSMAG00000020654	raver2	100	89.876	Scophthalmus_maximus
ENSSDUG00000013065	raver2	97	99.648	ENSSLDG00000002746	raver2	100	99.648	Seriola_lalandi_dorsalis
ENSSDUG00000013065	raver2	69	48.777	ENSSPUG00000016441	RAVER2	85	48.604	Sphenodon_punctatus
ENSSDUG00000013065	raver2	69	48.445	ENSSSCG00000025672	-	85	49.742	Sus_scrofa
ENSSDUG00000013065	raver2	65	46.325	ENSTGUG00000009973	RAVER2	74	52.632	Taeniopygia_guttata
ENSSDUG00000013065	raver2	77	94.444	ENSTRUG00000018541	raver2	99	94.444	Takifugu_rubripes
ENSSDUG00000013065	raver2	70	72.846	ENSTNIG00000018106	raver2	100	72.520	Tetraodon_nigroviridis
ENSSDUG00000013065	raver2	61	44.604	ENSTBEG00000009004	RAVER2	85	44.485	Tupaia_belangeri
ENSSDUG00000013065	raver2	68	46.393	ENSUAMG00000007847	RAVER2	76	48.370	Ursus_americanus
ENSSDUG00000013065	raver2	65	46.907	ENSUMAG00000008489	RAVER2	78	48.007	Ursus_maritimus
ENSSDUG00000013065	raver2	67	48.105	ENSVVUG00000013993	RAVER2	85	49.217	Vulpes_vulpes
ENSSDUG00000013065	raver2	100	86.456	ENSXMAG00000002206	raver2	100	87.133	Xiphophorus_maculatus