EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013118 (Gene tree)
Gene ID: 111237976
Gene Symbol: nup35
Alias: fj68d11|wu:fj68d11|zgc:65979
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6407 bases
Position: chrBDQW01001125.1:666466-672872
Accession: 111237976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000017981	Nup35_RRM	PF05172.13	2.1e-25	1	1
ENSSDUP00000017985	Nup35_RRM	PF05172.13	2.1e-25	1	1
ENSSDUP00000017985	Nup35_RRM_2	PF14605.6	4.2e-10	1	1
ENSSDUP00000017981	Nup35_RRM_2	PF14605.6	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018310	-	882	-	ENSSDUP00000017981	293 (aa)	-	-
ENSSDUT00000018313	-	2005	XM_022767309	ENSSDUP00000017985	292 (aa)	XP_022623030	UPI000BBECE12

Gene Model

Click here to download ENSSDUG00000013118's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013118	nup35	99	59.190	ENSG00000163002	NUP35	100	66.667	Homo_sapiens
ENSSDUG00000013118	nup35	100	90.847	ENSAPOG00000003630	nup35	100	90.169	Acanthochromis_polyacanthus
ENSSDUG00000013118	nup35	99	60.883	ENSAMEG00000001191	NUP35	99	57.055	Ailuropoda_melanoleuca
ENSSDUG00000013118	nup35	79	90.517	ENSACIG00000023984	nup35	96	90.870	Amphilophus_citrinellus
ENSSDUG00000013118	nup35	100	91.186	ENSAOCG00000007484	nup35	100	90.508	Amphiprion_ocellaris
ENSSDUG00000013118	nup35	100	90.169	ENSAPEG00000020027	nup35	100	89.492	Amphiprion_percula
ENSSDUG00000013118	nup35	100	92.857	ENSATEG00000019305	nup35	100	92.857	Anabas_testudineus
ENSSDUG00000013118	nup35	99	62.145	ENSAPLG00000009161	NUP35	97	60.252	Anas_platyrhynchos
ENSSDUG00000013118	nup35	99	58.934	ENSACAG00000008692	NUP35	96	59.425	Anolis_carolinensis
ENSSDUG00000013118	nup35	99	59.813	ENSANAG00000021090	NUP35	99	56.481	Aotus_nancymaae
ENSSDUG00000013118	nup35	100	87.584	ENSACLG00000013918	nup35	100	85.235	Astatotilapia_calliptera
ENSSDUG00000013118	nup35	99	64.465	ENSAMXG00000003371	nup35	100	65.033	Astyanax_mexicanus
ENSSDUG00000013118	nup35	99	59.502	ENSBTAG00000009777	NUP35	99	58.025	Bos_taurus
ENSSDUG00000013118	nup35	99	59.813	ENSCJAG00000011104	NUP35	99	56.481	Callithrix_jacchus
ENSSDUG00000013118	nup35	97	58.176	ENSCAFG00000031849	NUP35	100	59.295	Canis_familiaris
ENSSDUG00000013118	nup35	98	58.385	ENSCAFG00020008408	NUP35	96	59.494	Canis_lupus_dingo
ENSSDUG00000013118	nup35	97	59.494	ENSCHIG00000023148	NUP35	100	60.323	Capra_hircus
ENSSDUG00000013118	nup35	99	59.327	ENSTSYG00000002117	NUP35	99	57.585	Carlito_syrichta
ENSSDUG00000013118	nup35	98	49.682	ENSCAPG00000005703	NUP35	97	50.637	Cavia_aperea
ENSSDUG00000013118	nup35	99	58.567	ENSCPOG00000011906	NUP35	97	60.703	Cavia_porcellus
ENSSDUG00000013118	nup35	99	59.813	ENSCCAG00000025009	NUP35	100	60.000	Cebus_capucinus
ENSSDUG00000013118	nup35	99	53.226	ENSCATG00000033109	NUP35	99	52.412	Cercocebus_atys
ENSSDUG00000013118	nup35	99	58.567	ENSCLAG00000012559	NUP35	99	57.231	Chinchilla_lanigera
ENSSDUG00000013118	nup35	99	58.879	ENSCSAG00000012620	NUP35	99	57.099	Chlorocebus_sabaeus
ENSSDUG00000013118	nup35	100	60.123	ENSCPBG00000001303	NUP35	98	61.180	Chrysemys_picta_bellii
ENSSDUG00000013118	nup35	97	43.910	ENSCING00000009659	-	97	43.269	Ciona_intestinalis
ENSSDUG00000013118	nup35	97	41.265	ENSCSAVG00000007467	-	99	41.265	Ciona_savignyi
ENSSDUG00000013118	nup35	99	58.879	ENSCANG00000030785	NUP35	100	60.000	Colobus_angolensis_palliatus
ENSSDUG00000013118	nup35	99	59.375	ENSCGRG00001018638	-	99	57.453	Cricetulus_griseus_chok1gshd
ENSSDUG00000013118	nup35	99	59.375	ENSCGRG00000011313	-	99	57.453	Cricetulus_griseus_crigri
ENSSDUG00000013118	nup35	100	82.943	ENSCSEG00000000938	nup35	100	80.602	Cynoglossus_semilaevis
ENSSDUG00000013118	nup35	100	86.486	ENSCVAG00000001792	nup35	100	84.797	Cyprinodon_variegatus
ENSSDUG00000013118	nup35	100	65.094	ENSDARG00000012222	nup35	100	65.894	Danio_rerio
ENSSDUG00000013118	nup35	99	61.006	ENSDNOG00000038754	-	99	57.669	Dasypus_novemcinctus
ENSSDUG00000013118	nup35	99	61.321	ENSDNOG00000009513	-	88	57.975	Dasypus_novemcinctus
ENSSDUG00000013118	nup35	99	59.190	ENSDORG00000010458	-	97	60.191	Dipodomys_ordii
ENSSDUG00000013118	nup35	56	35.119	FBgn0030943	CG6540	50	34.524	Drosophila_melanogaster
ENSSDUG00000013118	nup35	98	58.934	ENSETEG00000005896	NUP35	100	60.064	Echinops_telfairi
ENSSDUG00000013118	nup35	98	54.321	ENSEBUG00000013034	nup35	99	53.704	Eptatretus_burgeri
ENSSDUG00000013118	nup35	99	58.879	ENSEASG00005022100	NUP35	99	57.975	Equus_asinus_asinus
ENSSDUG00000013118	nup35	99	58.824	ENSECAG00000003968	NUP35	100	60.256	Equus_caballus
ENSSDUG00000013118	nup35	99	53.251	ENSEEUG00000008469	NUP35	97	53.628	Erinaceus_europaeus
ENSSDUG00000013118	nup35	100	66.773	ENSELUG00000013693	nup35	100	66.776	Esox_lucius
ENSSDUG00000013118	nup35	99	58.204	ENSFCAG00000025636	NUP35	100	58.974	Felis_catus
ENSSDUG00000013118	nup35	100	59.190	ENSFALG00000013175	NUP35	98	59.190	Ficedula_albicollis
ENSSDUG00000013118	nup35	99	58.879	ENSFDAG00000017998	NUP35	99	57.099	Fukomys_damarensis
ENSSDUG00000013118	nup35	100	87.797	ENSFHEG00000010229	nup35	100	88.136	Fundulus_heteroclitus
ENSSDUG00000013118	nup35	79	69.328	ENSGMOG00000003337	nup35	100	69.068	Gadus_morhua
ENSSDUG00000013118	nup35	98	59.810	ENSGALG00000002689	NUP35	97	59.177	Gallus_gallus
ENSSDUG00000013118	nup35	100	84.228	ENSGAFG00000022048	nup35	100	85.235	Gambusia_affinis
ENSSDUG00000013118	nup35	100	87.031	ENSGACG00000008203	nup35	100	87.031	Gasterosteus_aculeatus
ENSSDUG00000013118	nup35	97	60.252	ENSGAGG00000001967	NUP35	100	61.342	Gopherus_agassizii
ENSSDUG00000013118	nup35	99	59.190	ENSGGOG00000009919	NUP35	99	57.407	Gorilla_gorilla
ENSSDUG00000013118	nup35	99	58.567	ENSHGLG00000013230	NUP35	99	57.846	Heterocephalus_glaber_female
ENSSDUG00000013118	nup35	98	44.654	ENSHGLG00000000414	-	97	45.513	Heterocephalus_glaber_female
ENSSDUG00000013118	nup35	92	50.676	ENSHGLG00000008616	-	90	51.568	Heterocephalus_glaber_female
ENSSDUG00000013118	nup35	92	50.676	ENSHGLG00100000091	-	91	51.568	Heterocephalus_glaber_male
ENSSDUG00000013118	nup35	99	58.567	ENSHGLG00100012840	NUP35	99	57.846	Heterocephalus_glaber_male
ENSSDUG00000013118	nup35	98	44.654	ENSHGLG00100010869	-	97	45.513	Heterocephalus_glaber_male
ENSSDUG00000013118	nup35	100	82.935	ENSHCOG00000003882	nup35	100	82.253	Hippocampus_comes
ENSSDUG00000013118	nup35	100	65.176	ENSIPUG00000002798	nup35	98	67.110	Ictalurus_punctatus
ENSSDUG00000013118	nup35	99	58.621	ENSSTOG00000000711	NUP35	99	58.075	Ictidomys_tridecemlineatus
ENSSDUG00000013118	nup35	100	57.329	ENSJJAG00000007003	-	97	58.416	Jaculus_jaculus
ENSSDUG00000013118	nup35	99	52.941	ENSJJAG00000017434	-	99	52.941	Jaculus_jaculus
ENSSDUG00000013118	nup35	84	56.727	ENSJJAG00000006387	-	91	56.364	Jaculus_jaculus
ENSSDUG00000013118	nup35	99	58.567	ENSJJAG00000016432	-	97	60.127	Jaculus_jaculus
ENSSDUG00000013118	nup35	100	83.278	ENSKMAG00000011162	nup35	100	83.278	Kryptolebias_marmoratus
ENSSDUG00000013118	nup35	99	70.690	ENSLBEG00000012416	nup35	99	70.690	Labrus_bergylta
ENSSDUG00000013118	nup35	97	60.252	ENSLACG00000008247	NUP35	100	61.415	Latimeria_chalumnae
ENSSDUG00000013118	nup35	100	64.596	ENSLOCG00000006726	nup35	100	65.506	Lepisosteus_oculatus
ENSSDUG00000013118	nup35	99	59.502	ENSLAFG00000008155	NUP35	99	55.793	Loxodonta_africana
ENSSDUG00000013118	nup35	99	58.567	ENSMFAG00000000834	NUP35	100	59.677	Macaca_fascicularis
ENSSDUG00000013118	nup35	99	58.879	ENSMMUG00000004140	NUP35	99	60.064	Macaca_mulatta
ENSSDUG00000013118	nup35	99	58.879	ENSMNEG00000029014	NUP35	99	57.099	Macaca_nemestrina
ENSSDUG00000013118	nup35	99	58.879	ENSMLEG00000035422	NUP35	100	60.000	Mandrillus_leucophaeus
ENSSDUG00000013118	nup35	100	90.068	ENSMAMG00000013232	nup35	100	89.384	Mastacembelus_armatus
ENSSDUG00000013118	nup35	99	86.735	ENSMZEG00005020619	nup35	98	83.942	Maylandia_zebra
ENSSDUG00000013118	nup35	97	58.013	ENSMGAG00000004412	NUP35	95	58.013	Meleagris_gallopavo
ENSSDUG00000013118	nup35	99	58.255	ENSMAUG00000013776	-	99	56.966	Mesocricetus_auratus
ENSSDUG00000013118	nup35	99	57.632	ENSMICG00000006790	NUP35	100	59.677	Microcebus_murinus
ENSSDUG00000013118	nup35	99	58.567	ENSMOCG00000014754	-	99	56.966	Microtus_ochrogaster
ENSSDUG00000013118	nup35	100	86.644	ENSMMOG00000005026	nup35	100	86.644	Mola_mola
ENSSDUG00000013118	nup35	99	61.442	ENSMODG00000010578	NUP35	96	62.620	Monodelphis_domestica
ENSSDUG00000013118	nup35	100	89.384	ENSMALG00000020187	nup35	100	88.699	Monopterus_albus
ENSSDUG00000013118	nup35	99	57.944	MGP_CAROLIEiJ_G0023709	-	99	56.966	Mus_caroli
ENSSDUG00000013118	nup35	99	57.367	ENSMUSG00000026999	Nup35	99	56.966	Mus_musculus
ENSSDUG00000013118	nup35	99	57.944	MGP_PahariEiJ_G0025160	-	99	56.966	Mus_pahari
ENSSDUG00000013118	nup35	80	51.195	MGP_SPRETEiJ_G0033063	-	96	51.034	Mus_spretus
ENSSDUG00000013118	nup35	99	57.585	ENSMPUG00000002063	NUP35	96	59.621	Mustela_putorius_furo
ENSSDUG00000013118	nup35	99	60.748	ENSMLUG00000013154	NUP35	99	58.462	Myotis_lucifugus
ENSSDUG00000013118	nup35	99	58.438	ENSNGAG00000012107	-	99	56.522	Nannospalax_galili
ENSSDUG00000013118	nup35	100	88.699	ENSNBRG00000020466	nup35	98	89.041	Neolamprologus_brichardi
ENSSDUG00000013118	nup35	99	59.190	ENSNLEG00000035026	NUP35	100	60.323	Nomascus_leucogenys
ENSSDUG00000013118	nup35	65	44.762	ENSMEUG00000003001	-	64	44.762	Notamacropus_eugenii
ENSSDUG00000013118	nup35	79	59.375	ENSOPRG00000016609	NUP35	78	59.216	Ochotona_princeps
ENSSDUG00000013118	nup35	98	43.042	ENSODEG00000000280	-	98	41.534	Octodon_degus
ENSSDUG00000013118	nup35	99	58.879	ENSODEG00000011202	-	97	59.306	Octodon_degus
ENSSDUG00000013118	nup35	100	88.629	ENSONIG00000016251	nup35	100	87.625	Oreochromis_niloticus
ENSSDUG00000013118	nup35	74	63.559	ENSOANG00000006793	-	97	63.559	Ornithorhynchus_anatinus
ENSSDUG00000013118	nup35	99	59.190	ENSOCUG00000014407	NUP35	99	57.895	Oryctolagus_cuniculus
ENSSDUG00000013118	nup35	100	85.859	ENSORLG00000013588	nup35	100	84.848	Oryzias_latipes
ENSSDUG00000013118	nup35	100	85.859	ENSORLG00020008201	nup35	100	84.848	Oryzias_latipes_hni
ENSSDUG00000013118	nup35	100	85.522	ENSORLG00015011096	nup35	100	84.512	Oryzias_latipes_hsok
ENSSDUG00000013118	nup35	100	86.195	ENSOMEG00000007628	nup35	100	85.185	Oryzias_melastigma
ENSSDUG00000013118	nup35	99	57.632	ENSOGAG00000011920	NUP35	99	57.231	Otolemur_garnettii
ENSSDUG00000013118	nup35	99	59.190	ENSOARG00000016728	NUP35	99	57.846	Ovis_aries
ENSSDUG00000013118	nup35	99	59.190	ENSPPAG00000036316	NUP35	100	60.323	Pan_paniscus
ENSSDUG00000013118	nup35	99	58.514	ENSPPRG00000024726	NUP35	100	59.295	Panthera_pardus
ENSSDUG00000013118	nup35	99	58.514	ENSPTIG00000017299	NUP35	99	56.269	Panthera_tigris_altaica
ENSSDUG00000013118	nup35	99	59.190	ENSPTRG00000012711	NUP35	100	60.323	Pan_troglodytes
ENSSDUG00000013118	nup35	99	58.879	ENSPANG00000013686	NUP35	99	57.099	Papio_anubis
ENSSDUG00000013118	nup35	100	64.815	ENSPKIG00000022051	nup35	100	66.667	Paramormyrops_kingsleyae
ENSSDUG00000013118	nup35	97	60.759	ENSPSIG00000002146	NUP35	100	61.859	Pelodiscus_sinensis
ENSSDUG00000013118	nup35	98	72.727	ENSPMGG00000022915	nup35	98	73.810	Periophthalmus_magnuspinnatus
ENSSDUG00000013118	nup35	99	58.567	ENSPEMG00000014718	-	99	57.276	Peromyscus_maniculatus_bairdii
ENSSDUG00000013118	nup35	99	54.348	ENSPMAG00000006604	nup35	98	53.416	Petromyzon_marinus
ENSSDUG00000013118	nup35	99	60.748	ENSPCIG00000015482	NUP35	96	60.952	Phascolarctos_cinereus
ENSSDUG00000013118	nup35	100	84.228	ENSPFOG00000010020	nup35	100	85.235	Poecilia_formosa
ENSSDUG00000013118	nup35	100	83.893	ENSPLAG00000005867	nup35	100	84.899	Poecilia_latipinna
ENSSDUG00000013118	nup35	100	85.616	ENSPMEG00000010552	nup35	100	85.274	Poecilia_mexicana
ENSSDUG00000013118	nup35	100	86.301	ENSPREG00000021005	nup35	100	85.959	Poecilia_reticulata
ENSSDUG00000013118	nup35	98	59.375	ENSPPYG00000012998	-	77	60.510	Pongo_abelii
ENSSDUG00000013118	nup35	72	78.049	ENSPCAG00000000605	NUP35	77	78.049	Procavia_capensis
ENSSDUG00000013118	nup35	99	57.944	ENSPCOG00000024097	NUP35	99	57.231	Propithecus_coquereli
ENSSDUG00000013118	nup35	99	58.567	ENSPVAG00000015908	NUP35	99	57.538	Pteropus_vampyrus
ENSSDUG00000013118	nup35	99	87.931	ENSPNYG00000012486	nup35	96	86.552	Pundamilia_nyererei
ENSSDUG00000013118	nup35	99	65.931	ENSPNAG00000005181	nup35	98	66.129	Pygocentrus_nattereri
ENSSDUG00000013118	nup35	99	57.944	ENSRNOG00000009290	Nup35	99	57.276	Rattus_norvegicus
ENSSDUG00000013118	nup35	99	58.879	ENSRBIG00000039427	NUP35	100	60.000	Rhinopithecus_bieti
ENSSDUG00000013118	nup35	99	58.879	ENSRROG00000026525	NUP35	99	57.099	Rhinopithecus_roxellana
ENSSDUG00000013118	nup35	99	59.813	ENSSBOG00000018676	NUP35	100	60.500	Saimiri_boliviensis_boliviensis
ENSSDUG00000013118	nup35	99	61.180	ENSSHAG00000009746	NUP35	99	58.154	Sarcophilus_harrisii
ENSSDUG00000013118	nup35	100	66.460	ENSSFOG00015002390	nup35	100	66.032	Scleropages_formosus
ENSSDUG00000013118	nup35	100	88.475	ENSSMAG00000015651	nup35	100	87.797	Scophthalmus_maximus
ENSSDUG00000013118	nup35	100	97.611	ENSSLDG00000018249	nup35	100	97.611	Seriola_lalandi_dorsalis
ENSSDUG00000013118	nup35	98	45.794	ENSSARG00000001535	-	100	46.349	Sorex_araneus
ENSSDUG00000013118	nup35	99	59.133	ENSSPUG00000018651	NUP35	97	60.568	Sphenodon_punctatus
ENSSDUG00000013118	nup35	100	89.831	ENSSPAG00000018264	nup35	100	89.153	Stegastes_partitus
ENSSDUG00000013118	nup35	99	60.125	ENSSSCG00000028949	NUP35	96	59.683	Sus_scrofa
ENSSDUG00000013118	nup35	99	59.248	ENSTGUG00000011278	NUP35	98	58.307	Taeniopygia_guttata
ENSSDUG00000013118	nup35	93	76.642	ENSTRUG00000014111	nup35	100	75.182	Takifugu_rubripes
ENSSDUG00000013118	nup35	99	67.128	ENSTNIG00000011568	nup35	99	63.636	Tetraodon_nigroviridis
ENSSDUG00000013118	nup35	99	56.250	ENSTBEG00000003328	NUP35	99	54.630	Tupaia_belangeri
ENSSDUG00000013118	nup35	99	52.903	ENSTTRG00000002512	NUP35	99	52.090	Tursiops_truncatus
ENSSDUG00000013118	nup35	64	63.500	ENSUAMG00000018696	-	97	60.804	Ursus_americanus
ENSSDUG00000013118	nup35	90	57.860	ENSUMAG00000017104	NUP35	99	54.785	Ursus_maritimus
ENSSDUG00000013118	nup35	99	58.879	ENSVPAG00000011898	NUP35	99	57.538	Vicugna_pacos
ENSSDUG00000013118	nup35	97	57.862	ENSVVUG00000016832	NUP35	100	58.974	Vulpes_vulpes
ENSSDUG00000013118	nup35	98	53.943	ENSXETG00000001335	nup35	98	52.174	Xenopus_tropicalis
ENSSDUG00000013118	nup35	100	84.564	ENSXMAG00000000409	nup35	100	85.570	Xiphophorus_maculatus