EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013160 (Gene tree)
Gene ID: 111218510
Gene Symbol: si:ch1073-55a19.2
Alias: -
Full Name: E3 SUMO-protein ligase RanBP2-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 25470 bases
Position: chrBDQW01000052.1:6954171-6979640
Accession: 111218510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018065	zf-RanBP	PF00641.18	2.6e-40	1	5
ENSSDUP00000018065	zf-RanBP	PF00641.18	2.6e-40	2	5
ENSSDUP00000018065	zf-RanBP	PF00641.18	2.6e-40	3	5
ENSSDUP00000018065	zf-RanBP	PF00641.18	2.6e-40	4	5
ENSSDUP00000018065	zf-RanBP	PF00641.18	2.6e-40	5	5
ENSSDUP00000018015	zf-RanBP	PF00641.18	2.8e-40	1	5
ENSSDUP00000018015	zf-RanBP	PF00641.18	2.8e-40	2	5
ENSSDUP00000018015	zf-RanBP	PF00641.18	2.8e-40	3	5
ENSSDUP00000018015	zf-RanBP	PF00641.18	2.8e-40	4	5
ENSSDUP00000018015	zf-RanBP	PF00641.18	2.8e-40	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018343	-	10580	-	ENSSDUP00000018015	3060 (aa)	-	-
ENSSDUT00000018393	-	10502	XM_022740845	ENSSDUP00000018065	3034 (aa)	XP_022596566	-

Gene Model

Click here to download ENSSDUG00000013160's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSG00000153201	RANBP2	90	69.565	Homo_sapiens
ENSSDUG00000013160	si:ch1073-55a19.2	100	87.915	ENSAPOG00000017146	si:ch1073-55a19.2	100	87.783	Acanthochromis_polyacanthus
ENSSDUG00000013160	si:ch1073-55a19.2	99	56.000	ENSAMEG00000013078	RANBP2	100	53.571	Ailuropoda_melanoleuca
ENSSDUG00000013160	si:ch1073-55a19.2	100	79.641	ENSACIG00000001203	si:ch1073-55a19.2	100	78.417	Amphilophus_citrinellus
ENSSDUG00000013160	si:ch1073-55a19.2	100	88.636	ENSAPEG00000012495	si:ch1073-55a19.2	100	88.701	Amphiprion_percula
ENSSDUG00000013160	si:ch1073-55a19.2	100	86.319	ENSATEG00000001716	si:ch1073-55a19.2	100	86.253	Anabas_testudineus
ENSSDUG00000013160	si:ch1073-55a19.2	95	51.573	ENSACAG00000002091	RANBP2	100	51.707	Anolis_carolinensis
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.730	ENSANAG00000023124	RANBP2	100	50.055	Aotus_nancymaae
ENSSDUG00000013160	si:ch1073-55a19.2	100	83.013	ENSACLG00000020500	si:ch1073-55a19.2	100	83.013	Astatotilapia_calliptera
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.459	ENSBTAG00000000152	RANBP2	100	51.469	Bos_taurus
ENSSDUG00000013160	si:ch1073-55a19.2	100	53.383	ENSCJAG00000001189	RANBP2	100	55.396	Callithrix_jacchus
ENSSDUG00000013160	si:ch1073-55a19.2	99	73.203	ENSCAFG00000023061	RANBP2	100	73.203	Canis_familiaris
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSCAFG00020009314	RANBP2	100	55.396	Canis_lupus_dingo
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.147	ENSCHIG00000012686	RANBP2	100	51.034	Capra_hircus
ENSSDUG00000013160	si:ch1073-55a19.2	99	51.190	ENSTSYG00000001656	RANBP2	100	50.124	Carlito_syrichta
ENSSDUG00000013160	si:ch1073-55a19.2	98	54.135	ENSCAPG00000010687	RANBP2	100	53.571	Cavia_aperea
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.732	ENSCPOG00000000392	RANBP2	100	50.015	Cavia_porcellus
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.150	ENSCCAG00000028166	RANBP2	100	56.115	Cebus_capucinus
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSCATG00000032597	RANBP2	100	53.571	Cercocebus_atys
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.861	ENSCLAG00000010533	RANBP2	100	50.724	Chinchilla_lanigera
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSCSAG00000017019	RANBP2	100	55.396	Chlorocebus_sabaeus
ENSSDUG00000013160	si:ch1073-55a19.2	63	68.000	ENSCHOG00000012659	-	59	68.000	Choloepus_hoffmanni
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.676	ENSCPBG00000006985	RANBP2	100	54.676	Chrysemys_picta_bellii
ENSSDUG00000013160	si:ch1073-55a19.2	97	50.359	ENSCANG00000041469	RANBP2	100	50.479	Colobus_angolensis_palliatus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.296	ENSCGRG00001000642	Ranbp2	100	51.022	Cricetulus_griseus_chok1gshd
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.655	ENSCGRG00000008995	Ranbp2	100	50.874	Cricetulus_griseus_crigri
ENSSDUG00000013160	si:ch1073-55a19.2	100	75.841	ENSCSEG00000013280	si:ch1073-55a19.2	100	75.775	Cynoglossus_semilaevis
ENSSDUG00000013160	si:ch1073-55a19.2	100	73.882	ENSCVAG00000016050	si:ch1073-55a19.2	100	74.076	Cyprinodon_variegatus
ENSSDUG00000013160	si:ch1073-55a19.2	100	57.212	ENSDARG00000093125	RANBP2	100	57.945	Danio_rerio
ENSSDUG00000013160	si:ch1073-55a19.2	99	49.969	ENSDNOG00000040501	RANBP2	99	51.267	Dasypus_novemcinctus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.881	ENSDORG00000002206	Ranbp2	100	50.862	Dipodomys_ordii
ENSSDUG00000013160	si:ch1073-55a19.2	74	58.205	ENSETEG00000008891	-	66	56.271	Echinops_telfairi
ENSSDUG00000013160	si:ch1073-55a19.2	95	49.655	ENSEBUG00000010057	si:ch1073-55a19.2	85	62.295	Eptatretus_burgeri
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.880	ENSEASG00005012918	RANBP2	100	53.571	Equus_asinus_asinus
ENSSDUG00000013160	si:ch1073-55a19.2	97	54.622	ENSECAG00000008458	RANBP2	96	54.622	Equus_caballus
ENSSDUG00000013160	si:ch1073-55a19.2	81	62.100	ENSEEUG00000007806	RANBP2	68	62.100	Erinaceus_europaeus
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.941	ENSELUG00000007763	si:ch1073-55a19.2	95	75.225	Esox_lucius
ENSSDUG00000013160	si:ch1073-55a19.2	99	51.230	ENSFALG00000003519	RANBP2	99	51.020	Ficedula_albicollis
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.436	ENSFDAG00000016912	RANBP2	100	50.062	Fukomys_damarensis
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.983	ENSFHEG00000009774	si:ch1073-55a19.2	100	77.126	Fundulus_heteroclitus
ENSSDUG00000013160	si:ch1073-55a19.2	98	66.782	ENSGMOG00000007071	si:ch1073-55a19.2	96	67.014	Gadus_morhua
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.983	ENSGAFG00000010966	si:ch1073-55a19.2	100	76.787	Gambusia_affinis
ENSSDUG00000013160	si:ch1073-55a19.2	99	80.504	ENSGACG00000006831	si:ch1073-55a19.2	100	78.842	Gasterosteus_aculeatus
ENSSDUG00000013160	si:ch1073-55a19.2	94	54.815	ENSGAGG00000025039	RANBP2	96	62.025	Gopherus_agassizii
ENSSDUG00000013160	si:ch1073-55a19.2	100	83.111	ENSHBUG00000000053	si:ch1073-55a19.2	100	83.111	Haplochromis_burtoni
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.663	ENSHGLG00000018887	RANBP2	100	50.446	Heterocephalus_glaber_female
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.902	ENSHGLG00100007365	RANBP2	100	50.232	Heterocephalus_glaber_male
ENSSDUG00000013160	si:ch1073-55a19.2	53	69.203	ENSHCOG00000019596	si:ch1073-55a19.2	100	74.756	Hippocampus_comes
ENSSDUG00000013160	si:ch1073-55a19.2	100	59.070	ENSIPUG00000019614	si:ch1073-55a19.2	100	58.161	Ictalurus_punctatus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.167	ENSSTOG00000019518	RANBP2	54	52.029	Ictidomys_tridecemlineatus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.301	ENSJJAG00000021292	Ranbp2	100	50.858	Jaculus_jaculus
ENSSDUG00000013160	si:ch1073-55a19.2	100	81.899	ENSKMAG00000001158	si:ch1073-55a19.2	100	81.800	Kryptolebias_marmoratus
ENSSDUG00000013160	si:ch1073-55a19.2	94	82.991	ENSLBEG00000027979	si:ch1073-55a19.2	99	82.822	Labrus_bergylta
ENSSDUG00000013160	si:ch1073-55a19.2	100	52.558	ENSLACG00000009728	RANBP2	100	52.581	Latimeria_chalumnae
ENSSDUG00000013160	si:ch1073-55a19.2	100	61.356	ENSLOCG00000010333	si:ch1073-55a19.2	100	60.986	Lepisosteus_oculatus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.820	ENSLAFG00000000740	RANBP2	62	51.477	Loxodonta_africana
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSMFAG00000029029	RANBP2	100	55.396	Macaca_fascicularis
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSMMUG00000021019	RANBP2	100	55.396	Macaca_mulatta
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSMNEG00000043706	RANBP2	100	55.396	Macaca_nemestrina
ENSSDUG00000013160	si:ch1073-55a19.2	99	54.135	ENSMLEG00000037350	RANBP2	100	55.396	Mandrillus_leucophaeus
ENSSDUG00000013160	si:ch1073-55a19.2	100	84.508	ENSMAMG00000017900	si:ch1073-55a19.2	100	84.758	Mastacembelus_armatus
ENSSDUG00000013160	si:ch1073-55a19.2	100	83.013	ENSMZEG00005010956	si:ch1073-55a19.2	100	83.013	Maylandia_zebra
ENSSDUG00000013160	si:ch1073-55a19.2	99	50.016	ENSMGAG00000014831	-	99	49.762	Meleagris_gallopavo
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.776	ENSMAUG00000013313	Ranbp2	100	51.078	Mesocricetus_auratus
ENSSDUG00000013160	si:ch1073-55a19.2	100	53.237	ENSMICG00000011864	RANBP2	100	55.396	Microcebus_murinus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.807	ENSMOCG00000012516	Ranbp2	100	51.250	Microtus_ochrogaster
ENSSDUG00000013160	si:ch1073-55a19.2	99	83.254	ENSMMOG00000005743	si:ch1073-55a19.2	99	87.661	Mola_mola
ENSSDUG00000013160	si:ch1073-55a19.2	99	54.784	ENSMODG00000002914	RANBP2	100	55.401	Monodelphis_domestica
ENSSDUG00000013160	si:ch1073-55a19.2	100	86.021	ENSMALG00000004359	si:ch1073-55a19.2	100	85.858	Monopterus_albus
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.824	ENSMUSG00000003226	Ranbp2	100	50.542	Mus_musculus
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.590	MGP_PahariEiJ_G0030751	Ranbp2	100	50.448	Mus_pahari
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.027	MGP_SPRETEiJ_G0016147	Ranbp2	100	50.557	Mus_spretus
ENSSDUG00000013160	si:ch1073-55a19.2	100	61.702	ENSMPUG00000010754	RANBP2	100	59.259	Mustela_putorius_furo
ENSSDUG00000013160	si:ch1073-55a19.2	99	50.462	ENSMLUG00000005555	RANBP2	100	51.274	Myotis_lucifugus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.791	ENSNGAG00000016154	Ranbp2	100	51.238	Nannospalax_galili
ENSSDUG00000013160	si:ch1073-55a19.2	100	82.954	ENSNBRG00000004587	si:ch1073-55a19.2	100	83.116	Neolamprologus_brichardi
ENSSDUG00000013160	si:ch1073-55a19.2	99	54.887	ENSNLEG00000007501	RANBP2	99	55.396	Nomascus_leucogenys
ENSSDUG00000013160	si:ch1073-55a19.2	92	54.400	ENSOPRG00000009720	-	94	54.400	Ochotona_princeps
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.380	ENSODEG00000013212	RANBP2	100	51.579	Octodon_degus
ENSSDUG00000013160	si:ch1073-55a19.2	100	80.692	ENSONIG00000004346	si:ch1073-55a19.2	100	80.692	Oreochromis_niloticus
ENSSDUG00000013160	si:ch1073-55a19.2	79	51.537	ENSOANG00000004894	RANBP2	100	50.704	Ornithorhynchus_anatinus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.180	ENSOCUG00000001165	RANBP2	100	51.980	Oryctolagus_cuniculus
ENSSDUG00000013160	si:ch1073-55a19.2	100	74.908	ENSORLG00000015523	si:ch1073-55a19.2	100	73.373	Oryzias_latipes
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.978	ENSORLG00020003797	si:ch1073-55a19.2	100	77.148	Oryzias_latipes_hni
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.805	ENSORLG00015004994	si:ch1073-55a19.2	100	76.976	Oryzias_latipes_hsok
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.021	ENSOMEG00000022969	si:ch1073-55a19.2	100	76.217	Oryzias_melastigma
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.076	ENSOGAG00000028976	RANBP2	100	51.122	Otolemur_garnettii
ENSSDUG00000013160	si:ch1073-55a19.2	99	50.866	ENSOARG00000000558	RANBP2	99	50.834	Ovis_aries
ENSSDUG00000013160	si:ch1073-55a19.2	100	54.135	ENSPANG00000000990	RANBP2	100	55.396	Papio_anubis
ENSSDUG00000013160	si:ch1073-55a19.2	94	50.977	ENSPKIG00000021054	-	99	52.941	Paramormyrops_kingsleyae
ENSSDUG00000013160	si:ch1073-55a19.2	100	62.561	ENSPKIG00000010971	RANBP2	100	65.345	Paramormyrops_kingsleyae
ENSSDUG00000013160	si:ch1073-55a19.2	99	52.477	ENSPSIG00000007182	RANBP2	99	52.617	Pelodiscus_sinensis
ENSSDUG00000013160	si:ch1073-55a19.2	92	66.410	ENSPEMG00000021565	Ranbp2	99	49.479	Peromyscus_maniculatus_bairdii
ENSSDUG00000013160	si:ch1073-55a19.2	85	47.761	ENSPMAG00000007195	si:ch1073-55a19.2	100	59.124	Petromyzon_marinus
ENSSDUG00000013160	si:ch1073-55a19.2	100	52.268	ENSPCIG00000013912	RANBP2	100	51.990	Phascolarctos_cinereus
ENSSDUG00000013160	si:ch1073-55a19.2	100	75.370	ENSPFOG00000007377	si:ch1073-55a19.2	100	75.113	Poecilia_formosa
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.534	ENSPLAG00000012373	si:ch1073-55a19.2	100	76.469	Poecilia_latipinna
ENSSDUG00000013160	si:ch1073-55a19.2	100	76.434	ENSPMEG00000005561	si:ch1073-55a19.2	100	76.240	Poecilia_mexicana
ENSSDUG00000013160	si:ch1073-55a19.2	100	74.194	ENSPREG00000013331	si:ch1073-55a19.2	100	72.588	Poecilia_reticulata
ENSSDUG00000013160	si:ch1073-55a19.2	71	55.396	ENSPPYG00000012139	-	99	55.396	Pongo_abelii
ENSSDUG00000013160	si:ch1073-55a19.2	52	59.621	ENSPPYG00000029793	-	99	59.937	Pongo_abelii
ENSSDUG00000013160	si:ch1073-55a19.2	95	65.109	ENSPCAG00000000957	RANBP2	76	65.109	Procavia_capensis
ENSSDUG00000013160	si:ch1073-55a19.2	100	57.556	ENSPCOG00000008879	RANBP2	99	55.396	Propithecus_coquereli
ENSSDUG00000013160	si:ch1073-55a19.2	99	56.364	ENSPVAG00000003883	RANBP2	93	56.364	Pteropus_vampyrus
ENSSDUG00000013160	si:ch1073-55a19.2	100	82.981	ENSPNYG00000015971	si:ch1073-55a19.2	100	82.981	Pundamilia_nyererei
ENSSDUG00000013160	si:ch1073-55a19.2	100	64.353	ENSPNAG00000026129	si:ch1073-55a19.2	100	64.182	Pygocentrus_nattereri
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.122	ENSRNOG00000000796	Ranbp2	100	50.882	Rattus_norvegicus
ENSSDUG00000013160	si:ch1073-55a19.2	100	55.000	ENSRBIG00000043515	RANBP2	100	55.000	Rhinopithecus_bieti
ENSSDUG00000013160	si:ch1073-55a19.2	100	50.844	ENSRROG00000026113	RANBP2	100	55.396	Rhinopithecus_roxellana
ENSSDUG00000013160	si:ch1073-55a19.2	98	55.949	ENSSBOG00000035336	RANBP2	100	55.396	Saimiri_boliviensis_boliviensis
ENSSDUG00000013160	si:ch1073-55a19.2	99	51.464	ENSSHAG00000004676	RANBP2	99	51.874	Sarcophilus_harrisii
ENSSDUG00000013160	si:ch1073-55a19.2	100	59.923	ENSSFOG00015023201	RANBP2	100	59.783	Scleropages_formosus
ENSSDUG00000013160	si:ch1073-55a19.2	99	65.639	ENSSFOG00015003943	-	99	65.639	Scleropages_formosus
ENSSDUG00000013160	si:ch1073-55a19.2	100	88.172	ENSSMAG00000007331	si:ch1073-55a19.2	100	88.237	Scophthalmus_maximus
ENSSDUG00000013160	si:ch1073-55a19.2	100	91.889	ENSSLDG00000023392	si:ch1073-55a19.2	100	91.889	Seriola_lalandi_dorsalis
ENSSDUG00000013160	si:ch1073-55a19.2	93	59.269	ENSSARG00000005595	RANBP2	74	59.269	Sorex_araneus
ENSSDUG00000013160	si:ch1073-55a19.2	100	88.411	ENSSPAG00000008000	si:ch1073-55a19.2	100	88.314	Stegastes_partitus
ENSSDUG00000013160	si:ch1073-55a19.2	100	51.336	ENSSSCG00000008136	RANBP2	98	53.459	Sus_scrofa
ENSSDUG00000013160	si:ch1073-55a19.2	100	53.268	ENSTGUG00000009571	RANBP2	100	55.479	Taeniopygia_guttata
ENSSDUG00000013160	si:ch1073-55a19.2	95	52.663	ENSTTRG00000007400	RANBP2	96	53.571	Tursiops_truncatus
ENSSDUG00000013160	si:ch1073-55a19.2	95	49.930	ENSUAMG00000020025	RANBP2	99	54.676	Ursus_americanus
ENSSDUG00000013160	si:ch1073-55a19.2	96	65.274	ENSVPAG00000006676	RANBP2	91	65.274	Vicugna_pacos
ENSSDUG00000013160	si:ch1073-55a19.2	98	55.574	ENSVVUG00000014899	RANBP2	99	67.488	Vulpes_vulpes
ENSSDUG00000013160	si:ch1073-55a19.2	94	50.450	ENSXETG00000016006	ranbp2	99	49.967	Xenopus_tropicalis
ENSSDUG00000013160	si:ch1073-55a19.2	99	72.443	ENSXCOG00000000752	si:ch1073-55a19.2	99	84.319	Xiphophorus_couchianus
ENSSDUG00000013160	si:ch1073-55a19.2	98	84.143	ENSXMAG00000003519	si:ch1073-55a19.2	100	76.020	Xiphophorus_maculatus