EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013213 (Gene tree)
Gene ID: 111228674
Gene Symbol: pes
Alias: etID309792.5
Full Name: pescadillo ribosomal biogenesis factor 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8747 bases
Position: chrBDQW01000017.1:853765-862511
Accession: 111228674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018149	Pescadillo_N	PF06732.11	2.2e-124	1	1
ENSSDUP00000018192	Pescadillo_N	PF06732.11	2.5e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018520	-	1707	-	ENSSDUP00000018192	568 (aa)	-	-
ENSSDUT00000018477	-	3235	XM_022754682	ENSSDUP00000018149	588 (aa)	XP_022610403	UPI000BBEA720

Gene Model

Click here to download ENSSDUG00000013213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013213	pes	99	71.747	ENSG00000100029	PES1	100	76.471	Homo_sapiens
ENSSDUG00000013213	pes	98	88.388	ENSAPOG00000010054	pes	98	88.083	Acanthochromis_polyacanthus
ENSSDUG00000013213	pes	99	70.478	ENSAMEG00000007417	PES1	98	70.862	Ailuropoda_melanoleuca
ENSSDUG00000013213	pes	98	87.002	ENSACIG00000017610	pes	98	86.874	Amphilophus_citrinellus
ENSSDUG00000013213	pes	98	87.522	ENSAOCG00000008883	pes	98	86.874	Amphiprion_ocellaris
ENSSDUG00000013213	pes	98	86.828	ENSAPEG00000022652	pes	98	86.528	Amphiprion_percula
ENSSDUG00000013213	pes	98	84.276	ENSATEG00000007439	pes	98	84.099	Anabas_testudineus
ENSSDUG00000013213	pes	93	69.424	ENSAPLG00000014852	PES1	98	69.835	Anas_platyrhynchos
ENSSDUG00000013213	pes	98	71.601	ENSACAG00000009723	PES1	97	73.056	Anolis_carolinensis
ENSSDUG00000013213	pes	98	72.049	ENSANAG00000036411	PES1	98	71.972	Aotus_nancymaae
ENSSDUG00000013213	pes	98	56.454	ENSANAG00000021598	-	94	56.971	Aotus_nancymaae
ENSSDUG00000013213	pes	100	85.884	ENSACLG00000000815	pes	98	86.183	Astatotilapia_calliptera
ENSSDUG00000013213	pes	99	71.529	ENSAMXG00000001216	pes	98	72.193	Astyanax_mexicanus
ENSSDUG00000013213	pes	99	68.078	ENSBTAG00000007728	PES1	98	68.750	Bos_taurus
ENSSDUG00000013213	pes	75	48.712	WBGene00003063	lpd-7	79	49.533	Caenorhabditis_elegans
ENSSDUG00000013213	pes	99	71.918	ENSCJAG00000010617	PES1	98	72.145	Callithrix_jacchus
ENSSDUG00000013213	pes	99	70.085	ENSCAFG00000012792	PES1	98	70.639	Canis_familiaris
ENSSDUG00000013213	pes	99	70.205	ENSCAFG00020000977	PES1	98	70.761	Canis_lupus_dingo
ENSSDUG00000013213	pes	99	70.719	ENSCHIG00000015760	PES1	98	71.626	Capra_hircus
ENSSDUG00000013213	pes	99	71.233	ENSTSYG00000009798	PES1	98	71.626	Carlito_syrichta
ENSSDUG00000013213	pes	99	61.263	ENSCAPG00000012218	-	97	61.379	Cavia_aperea
ENSSDUG00000013213	pes	85	66.398	ENSCAPG00000007736	-	88	67.206	Cavia_aperea
ENSSDUG00000013213	pes	99	70.598	ENSCPOG00000003565	-	98	71.084	Cavia_porcellus
ENSSDUG00000013213	pes	99	61.092	ENSCPOG00000022594	-	97	61.207	Cavia_porcellus
ENSSDUG00000013213	pes	99	66.438	ENSCPOG00000039303	-	98	66.609	Cavia_porcellus
ENSSDUG00000013213	pes	99	71.062	ENSCCAG00000026457	PES1	98	71.280	Cebus_capucinus
ENSSDUG00000013213	pes	99	71.160	ENSCATG00000036948	PES1	98	71.379	Cercocebus_atys
ENSSDUG00000013213	pes	99	71.918	ENSCLAG00000010775	PES1	98	72.145	Chinchilla_lanigera
ENSSDUG00000013213	pes	99	70.769	ENSCSAG00000009207	PES1	98	71.157	Chlorocebus_sabaeus
ENSSDUG00000013213	pes	99	72.603	ENSCPBG00000007548	PES1	98	72.664	Chrysemys_picta_bellii
ENSSDUG00000013213	pes	99	71.575	ENSCANG00000039970	PES1	98	71.972	Colobus_angolensis_palliatus
ENSSDUG00000013213	pes	61	75.910	ENSCGRG00000015052	Pes1	97	75.350	Cricetulus_griseus_crigri
ENSSDUG00000013213	pes	98	87.522	ENSCSEG00000017612	pes	99	86.874	Cynoglossus_semilaevis
ENSSDUG00000013213	pes	98	87.219	ENSCVAG00000011600	pes	98	86.701	Cyprinodon_variegatus
ENSSDUG00000013213	pes	98	81.217	ENSDARG00000018902	pes	98	81.315	Danio_rerio
ENSSDUG00000013213	pes	97	48.582	ENSDNOG00000031909	-	97	48.387	Dasypus_novemcinctus
ENSSDUG00000013213	pes	99	71.039	ENSDNOG00000015709	-	98	71.799	Dasypus_novemcinctus
ENSSDUG00000013213	pes	96	72.212	ENSDORG00000016636	Pes1	100	72.035	Dipodomys_ordii
ENSSDUG00000013213	pes	75	51.598	FBgn0032138	CG4364	70	52.036	Drosophila_melanogaster
ENSSDUG00000013213	pes	81	56.531	ENSEBUG00000010234	pes	98	56.224	Eptatretus_burgeri
ENSSDUG00000013213	pes	96	57.914	ENSEASG00005010295	PES1	97	57.618	Equus_asinus_asinus
ENSSDUG00000013213	pes	99	70.918	ENSECAG00000002578	PES1	98	70.769	Equus_caballus
ENSSDUG00000013213	pes	98	80.961	ENSELUG00000003253	pes	98	80.308	Esox_lucius
ENSSDUG00000013213	pes	99	70.548	ENSFCAG00000008655	PES1	98	71.107	Felis_catus
ENSSDUG00000013213	pes	93	72.694	ENSFALG00000006909	PES1	98	71.429	Ficedula_albicollis
ENSSDUG00000013213	pes	99	71.791	ENSFDAG00000019029	PES1	98	72.633	Fukomys_damarensis
ENSSDUG00000013213	pes	98	80.243	ENSFHEG00000000287	pes	98	80.311	Fundulus_heteroclitus
ENSSDUG00000013213	pes	99	79.522	ENSGMOG00000013010	pes	99	78.584	Gadus_morhua
ENSSDUG00000013213	pes	98	71.972	ENSGALG00000007778	PES1	98	71.626	Gallus_gallus
ENSSDUG00000013213	pes	98	86.135	ENSGAFG00000012399	pes	98	84.629	Gambusia_affinis
ENSSDUG00000013213	pes	100	83.844	ENSGACG00000009302	pes	98	83.247	Gasterosteus_aculeatus
ENSSDUG00000013213	pes	99	72.774	ENSGAGG00000010897	PES1	98	73.010	Gopherus_agassizii
ENSSDUG00000013213	pes	99	71.575	ENSGGOG00000008530	PES1	98	71.972	Gorilla_gorilla
ENSSDUG00000013213	pes	99	55.214	ENSGGOG00000028472	-	97	55.536	Gorilla_gorilla
ENSSDUG00000013213	pes	83	90.323	ENSHBUG00000008000	pes	96	90.323	Haplochromis_burtoni
ENSSDUG00000013213	pes	99	71.115	ENSHGLG00000018472	PES1	98	71.945	Heterocephalus_glaber_female
ENSSDUG00000013213	pes	99	70.973	ENSHGLG00100004887	PES1	98	71.282	Heterocephalus_glaber_male
ENSSDUG00000013213	pes	100	81.633	ENSHCOG00000016666	pes	98	81.520	Hippocampus_comes
ENSSDUG00000013213	pes	98	79.723	ENSIPUG00000020261	pes1	98	78.893	Ictalurus_punctatus
ENSSDUG00000013213	pes	99	71.552	ENSSTOG00000013937	PES1	98	71.972	Ictidomys_tridecemlineatus
ENSSDUG00000013213	pes	99	71.429	ENSJJAG00000001782	-	98	71.799	Jaculus_jaculus
ENSSDUG00000013213	pes	77	69.697	ENSJJAG00000010640	-	92	69.697	Jaculus_jaculus
ENSSDUG00000013213	pes	98	86.874	ENSKMAG00000015285	pes	98	86.356	Kryptolebias_marmoratus
ENSSDUG00000013213	pes	98	83.216	ENSLBEG00000012366	pes	98	83.569	Labrus_bergylta
ENSSDUG00000013213	pes	98	73.310	ENSLACG00000017116	PES1	98	73.183	Latimeria_chalumnae
ENSSDUG00000013213	pes	98	74.332	ENSLOCG00000003935	pes	97	73.797	Lepisosteus_oculatus
ENSSDUG00000013213	pes	79	52.211	ENSLAFG00000022882	PES1	70	65.964	Loxodonta_africana
ENSSDUG00000013213	pes	99	71.575	ENSMFAG00000044708	PES1	98	71.972	Macaca_fascicularis
ENSSDUG00000013213	pes	99	71.575	ENSMMUG00000017562	PES1	98	71.972	Macaca_mulatta
ENSSDUG00000013213	pes	99	71.575	ENSMNEG00000029489	PES1	98	71.972	Macaca_nemestrina
ENSSDUG00000013213	pes	99	53.565	ENSMLEG00000030317	-	93	64.467	Mandrillus_leucophaeus
ENSSDUG00000013213	pes	99	70.769	ENSMLEG00000038584	PES1	98	71.675	Mandrillus_leucophaeus
ENSSDUG00000013213	pes	98	88.428	ENSMAMG00000014668	pes	98	87.737	Mastacembelus_armatus
ENSSDUG00000013213	pes	99	71.891	ENSMAUG00000018433	Pes1	98	72.145	Mesocricetus_auratus
ENSSDUG00000013213	pes	99	71.404	ENSMICG00000010123	PES1	98	71.799	Microcebus_murinus
ENSSDUG00000013213	pes	99	71.939	ENSMOCG00000021971	Pes1	98	72.366	Microtus_ochrogaster
ENSSDUG00000013213	pes	98	79.181	ENSMMOG00000017812	pes	98	78.723	Mola_mola
ENSSDUG00000013213	pes	98	72.097	ENSMODG00000009483	PES1	98	71.799	Monodelphis_domestica
ENSSDUG00000013213	pes	98	88.256	ENSMALG00000012929	pes	98	88.083	Monopterus_albus
ENSSDUG00000013213	pes	99	66.099	MGP_CAROLIEiJ_G0016021	Pes1	98	66.263	Mus_caroli
ENSSDUG00000013213	pes	99	71.721	ENSMUSG00000020430	Pes1	98	71.280	Mus_musculus
ENSSDUG00000013213	pes	78	95.385	MGP_PahariEiJ_G0016870	-	97	85.135	Mus_pahari
ENSSDUG00000013213	pes	99	71.044	MGP_SPRETEiJ_G0016862	Pes1	98	70.427	Mus_spretus
ENSSDUG00000013213	pes	99	71.404	ENSMPUG00000012950	PES1	98	71.453	Mustela_putorius_furo
ENSSDUG00000013213	pes	99	72.743	ENSNGAG00000015282	Pes1	98	73.356	Nannospalax_galili
ENSSDUG00000013213	pes	98	86.135	ENSNBRG00000006301	pes	98	86.010	Neolamprologus_brichardi
ENSSDUG00000013213	pes	99	64.103	ENSNLEG00000003908	PES1	98	64.767	Nomascus_leucogenys
ENSSDUG00000013213	pes	97	67.714	ENSMEUG00000011656	PES1	98	67.719	Notamacropus_eugenii
ENSSDUG00000013213	pes	99	70.628	ENSOPRG00000000636	PES1	98	71.184	Ochotona_princeps
ENSSDUG00000013213	pes	99	69.898	ENSODEG00000003187	PES1	98	70.103	Octodon_degus
ENSSDUG00000013213	pes	98	87.868	ENSONIG00000013543	pes	98	87.910	Oreochromis_niloticus
ENSSDUG00000013213	pes	62	66.940	ENSOANG00000012901	-	95	66.848	Ornithorhynchus_anatinus
ENSSDUG00000013213	pes	99	70.890	ENSOCUG00000009658	PES1	98	71.453	Oryctolagus_cuniculus
ENSSDUG00000013213	pes	98	85.320	ENSORLG00000007881	pes	98	84.801	Oryzias_latipes
ENSSDUG00000013213	pes	98	86.010	ENSORLG00020000368	pes	98	85.492	Oryzias_latipes_hni
ENSSDUG00000013213	pes	98	86.701	ENSORLG00015002220	pes	98	85.838	Oryzias_latipes_hsok
ENSSDUG00000013213	pes	98	86.010	ENSOMEG00000002922	pes	98	86.010	Oryzias_melastigma
ENSSDUG00000013213	pes	98	70.415	ENSOGAG00000005804	PES1	98	70.415	Otolemur_garnettii
ENSSDUG00000013213	pes	95	57.645	ENSOARG00000008214	PES1	100	58.377	Ovis_aries
ENSSDUG00000013213	pes	99	71.404	ENSPPAG00000029696	PES1	98	71.799	Pan_paniscus
ENSSDUG00000013213	pes	99	70.719	ENSPPRG00000024146	PES1	98	71.280	Panthera_pardus
ENSSDUG00000013213	pes	76	65.393	ENSPTIG00000021654	PES1	97	65.831	Panthera_tigris_altaica
ENSSDUG00000013213	pes	91	52.399	ENSPTRG00000045557	-	82	57.395	Pan_troglodytes
ENSSDUG00000013213	pes	99	71.575	ENSPTRG00000014251	PES1	98	71.972	Pan_troglodytes
ENSSDUG00000013213	pes	99	70.940	ENSPANG00000009607	PES1	97	71.848	Papio_anubis
ENSSDUG00000013213	pes	98	76.936	ENSPKIG00000024750	pes	97	78.082	Paramormyrops_kingsleyae
ENSSDUG00000013213	pes	98	84.258	ENSPMGG00000019024	pes	99	83.779	Periophthalmus_magnuspinnatus
ENSSDUG00000013213	pes	99	71.864	ENSPEMG00000012585	Pes1	98	72.117	Peromyscus_maniculatus_bairdii
ENSSDUG00000013213	pes	98	70.884	ENSPCIG00000023994	PES1	98	70.761	Phascolarctos_cinereus
ENSSDUG00000013213	pes	98	86.655	ENSPFOG00000014821	pes	98	86.010	Poecilia_formosa
ENSSDUG00000013213	pes	98	86.828	ENSPLAG00000003811	pes	98	86.183	Poecilia_latipinna
ENSSDUG00000013213	pes	98	86.655	ENSPMEG00000019878	pes	98	86.010	Poecilia_mexicana
ENSSDUG00000013213	pes	98	85.278	ENSPREG00000022586	pes	98	84.973	Poecilia_reticulata
ENSSDUG00000013213	pes	99	71.404	ENSPPYG00000011716	PES1	98	71.799	Pongo_abelii
ENSSDUG00000013213	pes	73	80.000	ENSPCAG00000011542	PES1	71	87.179	Procavia_capensis
ENSSDUG00000013213	pes	99	71.404	ENSPCOG00000016226	PES1	98	71.799	Propithecus_coquereli
ENSSDUG00000013213	pes	99	77.797	ENSPNAG00000020800	pes	98	77.233	Pygocentrus_nattereri
ENSSDUG00000013213	pes	99	72.232	ENSRNOG00000004515	Pes1	98	72.664	Rattus_norvegicus
ENSSDUG00000013213	pes	99	71.233	ENSRBIG00000040634	PES1	97	71.626	Rhinopithecus_bieti
ENSSDUG00000013213	pes	99	53.415	ENSRBIG00000034572	-	97	53.737	Rhinopithecus_bieti
ENSSDUG00000013213	pes	99	71.233	ENSRROG00000028779	PES1	98	71.626	Rhinopithecus_roxellana
ENSSDUG00000013213	pes	74	42.979	YGR103W	NOP7	97	40.299	Saccharomyces_cerevisiae
ENSSDUG00000013213	pes	99	70.719	ENSSBOG00000026073	PES1	98	70.934	Saimiri_boliviensis_boliviensis
ENSSDUG00000013213	pes	96	71.579	ENSSHAG00000002920	PES1	96	72.281	Sarcophilus_harrisii
ENSSDUG00000013213	pes	98	76.298	ENSSFOG00015005010	pes1	98	76.817	Scleropages_formosus
ENSSDUG00000013213	pes	100	89.286	ENSSMAG00000012102	pes	98	89.292	Scophthalmus_maximus
ENSSDUG00000013213	pes	100	97.619	ENSSLDG00000025373	pes	100	97.619	Seriola_lalandi_dorsalis
ENSSDUG00000013213	pes	98	72.145	ENSSPUG00000018150	PES1	98	72.664	Sphenodon_punctatus
ENSSDUG00000013213	pes	98	88.083	ENSSPAG00000018970	pes	98	87.910	Stegastes_partitus
ENSSDUG00000013213	pes	99	69.748	ENSSSCG00000010010	PES1	98	69.779	Sus_scrofa
ENSSDUG00000013213	pes	64	63.395	ENSTGUG00000015553	PES1	100	61.804	Taeniopygia_guttata
ENSSDUG00000013213	pes	98	84.629	ENSTRUG00000015909	pes	98	84.629	Takifugu_rubripes
ENSSDUG00000013213	pes	99	69.388	ENSTNIG00000015898	pes	99	68.739	Tetraodon_nigroviridis
ENSSDUG00000013213	pes	98	70.486	ENSTBEG00000009825	PES1	97	70.745	Tupaia_belangeri
ENSSDUG00000013213	pes	96	69.149	ENSTTRG00000001543	PES1	100	69.149	Tursiops_truncatus
ENSSDUG00000013213	pes	99	70.819	ENSUAMG00000006854	PES1	98	70.862	Ursus_americanus
ENSSDUG00000013213	pes	99	69.244	ENSUMAG00000016429	PES1	98	69.440	Ursus_maritimus
ENSSDUG00000013213	pes	99	70.377	ENSVVUG00000002684	-	98	70.934	Vulpes_vulpes
ENSSDUG00000013213	pes	99	68.995	ENSVVUG00000029961	-	98	69.377	Vulpes_vulpes
ENSSDUG00000013213	pes	99	59.899	ENSXETG00000030097	PES1	98	62.414	Xenopus_tropicalis
ENSSDUG00000013213	pes	98	85.689	ENSXCOG00000017009	pes	98	86.096	Xiphophorus_couchianus
ENSSDUG00000013213	pes	98	86.715	ENSXMAG00000007708	pes	98	85.868	Xiphophorus_maculatus