EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013271 (Gene tree)
Gene ID: 111218740
Gene Symbol: efl1
Alias: eftud1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 117708 bases
Position: chrBDQW01000003.1:18002706-18120413
Accession: 111218740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018237	GTP_EFTU	PF00009.27	1.2e-62	1	1
ENSSDUP00000018307	GTP_EFTU	PF00009.27	1.4e-62	1	1
ENSSDUP00000018307	GTP_EFTU_D2	PF03144.25	3.3e-10	1	1
ENSSDUP00000018237	GTP_EFTU_D2	PF03144.25	5.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018639	-	3357	-	ENSSDUP00000018307	1118 (aa)	-	-
ENSSDUT00000018569	-	4975	XM_022741183	ENSSDUP00000018237	1125 (aa)	XP_022596904	UPI000BBE91D5

Gene Model

Click here to download ENSSDUG00000013271's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013271	efl1	87	36.994	ENSSDUG00000022675	eftud2	84	36.994
ENSSDUG00000013271	efl1	92	36.645	ENSSDUG00000005084	-	98	36.607
ENSSDUG00000013271	efl1	92	35.982	ENSSDUG00000015383	eef2b	98	35.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013271	efl1	99	68.347	ENSG00000140598	EFL1	96	78.249	Homo_sapiens
ENSSDUG00000013271	efl1	100	87.456	ENSAPOG00000000188	efl1	100	87.721	Acanthochromis_polyacanthus
ENSSDUG00000013271	efl1	99	68.278	ENSAMEG00000006031	EFL1	99	68.366	Ailuropoda_melanoleuca
ENSSDUG00000013271	efl1	100	87.123	ENSACIG00000017802	efl1	100	87.300	Amphilophus_citrinellus
ENSSDUG00000013271	efl1	100	86.412	ENSAOCG00000023933	efl1	100	86.590	Amphiprion_ocellaris
ENSSDUG00000013271	efl1	100	88.339	ENSAPEG00000000262	efl1	100	88.604	Amphiprion_percula
ENSSDUG00000013271	efl1	100	87.279	ENSATEG00000012373	efl1	100	87.279	Anabas_testudineus
ENSSDUG00000013271	efl1	99	70.976	ENSAPLG00000011147	EFL1	99	70.976	Anas_platyrhynchos
ENSSDUG00000013271	efl1	99	69.726	ENSACAG00000011040	EFL1	99	69.726	Anolis_carolinensis
ENSSDUG00000013271	efl1	99	68.258	ENSANAG00000027459	EFL1	99	68.347	Aotus_nancymaae
ENSSDUG00000013271	efl1	100	86.069	ENSACLG00000025780	efl1	100	86.069	Astatotilapia_calliptera
ENSSDUG00000013271	efl1	100	76.307	ENSAMXG00000019529	efl1	100	76.087	Astyanax_mexicanus
ENSSDUG00000013271	efl1	99	69.190	ENSBTAG00000003410	EFL1	99	69.190	Bos_taurus
ENSSDUG00000013271	efl1	94	38.072	WBGene00010732	K10C3.5	93	56.780	Caenorhabditis_elegans
ENSSDUG00000013271	efl1	84	91.270	ENSCJAG00000015607	-	93	91.270	Callithrix_jacchus
ENSSDUG00000013271	efl1	99	67.663	ENSCAFG00000013671	EFL1	99	67.663	Canis_familiaris
ENSSDUG00000013271	efl1	99	68.893	ENSCHIG00000001883	EFL1	99	68.750	Capra_hircus
ENSSDUG00000013271	efl1	99	67.518	ENSTSYG00000000348	EFL1	99	67.606	Carlito_syrichta
ENSSDUG00000013271	efl1	99	58.107	ENSCAPG00000017944	EFL1	99	58.107	Cavia_aperea
ENSSDUG00000013271	efl1	99	67.750	ENSCPOG00000001924	EFL1	99	67.838	Cavia_porcellus
ENSSDUG00000013271	efl1	99	68.435	ENSCCAG00000034450	EFL1	99	68.523	Cebus_capucinus
ENSSDUG00000013271	efl1	99	67.639	ENSCATG00000031678	-	99	67.728	Cercocebus_atys
ENSSDUG00000013271	efl1	99	68.194	ENSCLAG00000010155	EFL1	86	81.928	Chinchilla_lanigera
ENSSDUG00000013271	efl1	99	67.816	ENSCSAG00000015165	EFL1	99	67.905	Chlorocebus_sabaeus
ENSSDUG00000013271	efl1	73	65.568	ENSCHOG00000014029	EFL1	78	65.568	Choloepus_hoffmanni
ENSSDUG00000013271	efl1	99	70.374	ENSCPBG00000017638	EFL1	99	70.547	Chrysemys_picta_bellii
ENSSDUG00000013271	efl1	100	56.605	ENSCSAVG00000001787	-	100	56.518	Ciona_savignyi
ENSSDUG00000013271	efl1	99	67.905	ENSCANG00000038093	EFL1	99	67.993	Colobus_angolensis_palliatus
ENSSDUG00000013271	efl1	99	65.172	ENSCGRG00001010826	Efl1	99	65.259	Cricetulus_griseus_chok1gshd
ENSSDUG00000013271	efl1	99	68.162	ENSCGRG00000003273	Efl1	99	68.250	Cricetulus_griseus_crigri
ENSSDUG00000013271	efl1	99	79.858	ENSCSEG00000005856	efl1	99	80.035	Cynoglossus_semilaevis
ENSSDUG00000013271	efl1	93	77.026	ENSCVAG00000011863	efl1	95	77.026	Cyprinodon_variegatus
ENSSDUG00000013271	efl1	100	76.325	ENSDARG00000079672	efl1	98	76.077	Danio_rerio
ENSSDUG00000013271	efl1	99	68.310	ENSDNOG00000006097	EFL1	99	68.398	Dasypus_novemcinctus
ENSSDUG00000013271	efl1	99	67.518	ENSDORG00000000719	Efl1	99	67.606	Dipodomys_ordii
ENSSDUG00000013271	efl1	99	46.023	FBgn0053158	CG33158	99	46.032	Drosophila_melanogaster
ENSSDUG00000013271	efl1	93	60.569	ENSETEG00000004309	EFL1	99	60.664	Echinops_telfairi
ENSSDUG00000013271	efl1	84	70.492	ENSEBUG00000010738	efl1	100	70.492	Eptatretus_burgeri
ENSSDUG00000013271	efl1	99	68.640	ENSEASG00005007108	EFL1	99	68.728	Equus_asinus_asinus
ENSSDUG00000013271	efl1	95	68.052	ENSECAG00000016354	EFL1	99	68.144	Equus_caballus
ENSSDUG00000013271	efl1	69	73.563	ENSEEUG00000006326	EFL1	78	73.563	Erinaceus_europaeus
ENSSDUG00000013271	efl1	100	74.328	ENSELUG00000002520	efl1	99	83.729	Esox_lucius
ENSSDUG00000013271	efl1	99	68.468	ENSFCAG00000007741	EFL1	99	68.468	Felis_catus
ENSSDUG00000013271	efl1	99	70.830	ENSFALG00000011103	EFL1	99	70.830	Ficedula_albicollis
ENSSDUG00000013271	efl1	99	68.102	ENSFDAG00000009023	EFL1	80	88.000	Fukomys_damarensis
ENSSDUG00000013271	efl1	100	80.390	ENSFHEG00000017795	efl1	100	80.479	Fundulus_heteroclitus
ENSSDUG00000013271	efl1	99	76.250	ENSGMOG00000005041	efl1	100	76.250	Gadus_morhua
ENSSDUG00000013271	efl1	99	70.768	ENSGALG00000006225	EFL1	99	70.768	Gallus_gallus
ENSSDUG00000013271	efl1	100	82.011	ENSGACG00000012495	efl1	100	82.011	Gasterosteus_aculeatus
ENSSDUG00000013271	efl1	99	71.179	ENSGAGG00000022841	EFL1	99	71.179	Gopherus_agassizii
ENSSDUG00000013271	efl1	97	63.917	ENSGGOG00000005017	EFL1	100	64.007	Gorilla_gorilla
ENSSDUG00000013271	efl1	100	85.185	ENSHBUG00000022667	efl1	100	85.538	Haplochromis_burtoni
ENSSDUG00000013271	efl1	99	65.581	ENSHGLG00000011798	EFL1	99	65.669	Heterocephalus_glaber_female
ENSSDUG00000013271	efl1	99	68.134	ENSHGLG00100010319	EFTUD1	94	85.897	Heterocephalus_glaber_male
ENSSDUG00000013271	efl1	100	82.092	ENSHCOG00000007325	efl1	100	82.004	Hippocampus_comes
ENSSDUG00000013271	efl1	100	75.332	ENSIPUG00000023360	EFTUD1	100	75.199	Ictalurus_punctatus
ENSSDUG00000013271	efl1	99	65.347	ENSSTOG00000022945	EFL1	99	65.435	Ictidomys_tridecemlineatus
ENSSDUG00000013271	efl1	99	68.078	ENSJJAG00000018598	Efl1	99	68.166	Jaculus_jaculus
ENSSDUG00000013271	efl1	100	84.704	ENSLBEG00000015269	efl1	100	84.704	Labrus_bergylta
ENSSDUG00000013271	efl1	100	72.101	ENSLACG00000016121	EFL1	100	72.101	Latimeria_chalumnae
ENSSDUG00000013271	efl1	100	75.022	ENSLOCG00000012862	efl1	99	75.154	Lepisosteus_oculatus
ENSSDUG00000013271	efl1	99	66.725	ENSLAFG00000012504	EFL1	99	66.813	Loxodonta_africana
ENSSDUG00000013271	efl1	99	67.816	ENSMFAG00000032657	-	99	67.905	Macaca_fascicularis
ENSSDUG00000013271	efl1	99	65.837	ENSMMUG00000023353	EFL1	99	65.923	Macaca_mulatta
ENSSDUG00000013271	efl1	99	67.728	ENSMNEG00000041671	-	99	67.816	Macaca_nemestrina
ENSSDUG00000013271	efl1	99	67.816	ENSMLEG00000033735	EFL1	99	67.905	Mandrillus_leucophaeus
ENSSDUG00000013271	efl1	100	87.721	ENSMAMG00000011336	efl1	100	87.721	Mastacembelus_armatus
ENSSDUG00000013271	efl1	100	85.172	ENSMZEG00005003012	efl1	100	85.525	Maylandia_zebra
ENSSDUG00000013271	efl1	99	70.903	ENSMGAG00000007991	EFL1	99	70.903	Meleagris_gallopavo
ENSSDUG00000013271	efl1	99	68.722	ENSMAUG00000010709	Efl1	99	68.811	Mesocricetus_auratus
ENSSDUG00000013271	efl1	99	68.250	ENSMICG00000027853	EFL1	94	76.826	Microcebus_murinus
ENSSDUG00000013271	efl1	99	67.920	ENSMOCG00000007470	Efl1	99	68.007	Microtus_ochrogaster
ENSSDUG00000013271	efl1	100	77.511	ENSMMOG00000015370	efl1	100	77.778	Mola_mola
ENSSDUG00000013271	efl1	100	68.241	ENSMODG00000019386	EFL1	100	68.329	Monodelphis_domestica
ENSSDUG00000013271	efl1	100	87.367	ENSMALG00000018810	efl1	100	87.367	Monopterus_albus
ENSSDUG00000013271	efl1	99	68.049	MGP_CAROLIEiJ_G0029936	Efl1	98	80.417	Mus_caroli
ENSSDUG00000013271	efl1	99	67.873	ENSMUSG00000038563	Efl1	99	80.087	Mus_musculus
ENSSDUG00000013271	efl1	99	67.577	MGP_PahariEiJ_G0013157	Efl1	99	79.654	Mus_pahari
ENSSDUG00000013271	efl1	99	75.556	MGP_SPRETEiJ_G0031038	Efl1	99	75.556	Mus_spretus
ENSSDUG00000013271	efl1	99	67.252	ENSMPUG00000015494	EFL1	99	67.603	Mustela_putorius_furo
ENSSDUG00000013271	efl1	99	68.430	ENSNGAG00000017740	Efl1	99	68.519	Nannospalax_galili
ENSSDUG00000013271	efl1	93	66.730	ENSNLEG00000010679	EFL1	100	66.825	Nomascus_leucogenys
ENSSDUG00000013271	efl1	63	81.132	ENSMEUG00000012049	-	69	81.132	Notamacropus_eugenii
ENSSDUG00000013271	efl1	58	88.710	ENSOPRG00000012488	-	57	88.710	Ochotona_princeps
ENSSDUG00000013271	efl1	99	67.345	ENSODEG00000016193	EFL1	82	88.158	Octodon_degus
ENSSDUG00000013271	efl1	100	85.123	ENSONIG00000003394	efl1	100	85.387	Oreochromis_niloticus
ENSSDUG00000013271	efl1	99	68.230	ENSOCUG00000012163	EFL1	99	68.319	Oryctolagus_cuniculus
ENSSDUG00000013271	efl1	63	72.676	ENSORLG00000020390	efl1	100	72.984	Oryzias_latipes
ENSSDUG00000013271	efl1	100	77.620	ENSORLG00015012031	efl1	98	84.188	Oryzias_latipes_hsok
ENSSDUG00000013271	efl1	100	78.280	ENSOMEG00000022784	efl1	100	78.191	Oryzias_melastigma
ENSSDUG00000013271	efl1	99	68.690	ENSOARG00000014452	EFL1	99	68.690	Ovis_aries
ENSSDUG00000013271	efl1	99	63.484	ENSPPAG00000039672	EFL1	99	63.572	Pan_paniscus
ENSSDUG00000013271	efl1	99	68.584	ENSPPRG00000002193	EFL1	99	68.761	Panthera_pardus
ENSSDUG00000013271	efl1	99	68.407	ENSPTIG00000007053	EFL1	99	68.584	Panthera_tigris_altaica
ENSSDUG00000013271	efl1	99	68.258	ENSPTRG00000007374	EFL1	99	68.347	Pan_troglodytes
ENSSDUG00000013271	efl1	99	67.728	ENSPANG00000015635	-	98	67.905	Papio_anubis
ENSSDUG00000013271	efl1	99	76.163	ENSPKIG00000018456	efl1	99	74.487	Paramormyrops_kingsleyae
ENSSDUG00000013271	efl1	99	70.496	ENSPSIG00000007790	EFL1	99	70.496	Pelodiscus_sinensis
ENSSDUG00000013271	efl1	93	63.485	ENSPMAG00000002026	efl1	100	63.442	Petromyzon_marinus
ENSSDUG00000013271	efl1	100	68.549	ENSPCIG00000004372	EFL1	100	69.008	Phascolarctos_cinereus
ENSSDUG00000013271	efl1	100	80.107	ENSPFOG00000018687	efl1	100	80.425	Poecilia_formosa
ENSSDUG00000013271	efl1	100	80.107	ENSPLAG00000001988	efl1	100	80.425	Poecilia_latipinna
ENSSDUG00000013271	efl1	100	79.929	ENSPMEG00000000402	efl1	100	80.248	Poecilia_mexicana
ENSSDUG00000013271	efl1	100	80.533	ENSPREG00000022085	efl1	100	80.851	Poecilia_reticulata
ENSSDUG00000013271	efl1	99	68.347	ENSPPYG00000006724	EFL1	99	68.435	Pongo_abelii
ENSSDUG00000013271	efl1	99	68.053	ENSPVAG00000003189	EFL1	99	68.142	Pteropus_vampyrus
ENSSDUG00000013271	efl1	100	76.611	ENSPNYG00000019406	efl1	100	77.052	Pundamilia_nyererei
ENSSDUG00000013271	efl1	100	77.388	ENSPNAG00000012104	efl1	100	77.301	Pygocentrus_nattereri
ENSSDUG00000013271	efl1	99	68.342	ENSRNOG00000032723	Efl1	99	68.342	Rattus_norvegicus
ENSSDUG00000013271	efl1	99	67.905	ENSRBIG00000040576	EFL1	99	67.993	Rhinopithecus_bieti
ENSSDUG00000013271	efl1	100	66.078	ENSRROG00000031475	EFL1	99	66.253	Rhinopithecus_roxellana
ENSSDUG00000013271	efl1	95	51.556	YNL163C	RIA1	87	50.547	Saccharomyces_cerevisiae
ENSSDUG00000013271	efl1	99	68.347	ENSSBOG00000018280	EFL1	99	68.435	Saimiri_boliviensis_boliviensis
ENSSDUG00000013271	efl1	100	64.917	ENSSHAG00000018863	EFL1	100	65.004	Sarcophilus_harrisii
ENSSDUG00000013271	efl1	100	76.670	ENSSFOG00015016244	efl1	100	76.670	Scleropages_formosus
ENSSDUG00000013271	efl1	100	86.849	ENSSMAG00000016928	efl1	100	86.849	Scophthalmus_maximus
ENSSDUG00000013271	efl1	100	99.022	ENSSLDG00000014655	efl1	100	99.022	Seriola_lalandi_dorsalis
ENSSDUG00000013271	efl1	100	70.761	ENSSPUG00000000941	EFL1	100	70.761	Sphenodon_punctatus
ENSSDUG00000013271	efl1	100	88.781	ENSSPAG00000011885	efl1	100	88.781	Stegastes_partitus
ENSSDUG00000013271	efl1	99	68.551	ENSSSCG00000001792	EFL1	99	68.640	Sus_scrofa
ENSSDUG00000013271	efl1	99	71.919	ENSTGUG00000007850	EFL1	99	71.919	Taeniopygia_guttata
ENSSDUG00000013271	efl1	100	73.134	ENSTNIG00000003399	efl1	100	72.935	Tetraodon_nigroviridis
ENSSDUG00000013271	efl1	73	79.503	ENSTBEG00000011804	EFL1	78	79.503	Tupaia_belangeri
ENSSDUG00000013271	efl1	99	67.608	ENSTTRG00000011243	EFL1	99	67.696	Tursiops_truncatus
ENSSDUG00000013271	efl1	99	67.753	ENSUAMG00000022106	EFL1	99	67.841	Ursus_americanus
ENSSDUG00000013271	efl1	99	68.018	ENSUMAG00000010303	EFL1	99	68.106	Ursus_maritimus
ENSSDUG00000013271	efl1	94	82.008	ENSVPAG00000005735	EFL1	94	82.008	Vicugna_pacos
ENSSDUG00000013271	efl1	99	67.750	ENSVVUG00000004967	EFL1	99	67.750	Vulpes_vulpes
ENSSDUG00000013271	efl1	100	71.366	ENSXETG00000015701	EFL1	100	71.229	Xenopus_tropicalis
ENSSDUG00000013271	efl1	100	80.373	ENSXMAG00000023705	efl1	100	80.602	Xiphophorus_maculatus