EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000013280 (Gene tree)
Gene ID: 111232887
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 551-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5881 bases
Position: chrBDQW01000341.1:475965-481845
Accession: 111232887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018188	zf-C2H2	PF00096.26	2.2e-24	1	2
ENSSDUP00000018188	zf-C2H2	PF00096.26	2.2e-24	2	2
ENSSDUP00000018188	zf-met	PF12874.7	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018516	-	3491	XM_022760572	ENSSDUP00000018188	746 (aa)	XP_022616293	-

Gene Model

Click here to download ENSSDUG00000013280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000013280	-	54	32.143	ENSSDUG00000020788	-	66	32.143
ENSSDUG00000013280	-	53	30.857	ENSSDUG00000011244	-	72	30.857
ENSSDUG00000013280	-	55	30.579	ENSSDUG00000013904	-	67	32.967
ENSSDUG00000013280	-	60	36.264	ENSSDUG00000011170	znf236	56	36.264
ENSSDUG00000013280	-	52	31.387	ENSSDUG00000006426	-	86	32.353
ENSSDUG00000013280	-	51	30.267	ENSSDUG00000009601	-	88	31.977
ENSSDUG00000013280	-	50	31.250	ENSSDUG00000006808	-	69	31.250
ENSSDUG00000013280	-	51	35.955	ENSSDUG00000009421	-	79	35.955
ENSSDUG00000013280	-	52	30.888	ENSSDUG00000019911	-	52	41.270
ENSSDUG00000013280	-	53	32.143	ENSSDUG00000005401	-	85	38.393
ENSSDUG00000013280	-	55	34.118	ENSSDUG00000008329	-	71	32.000
ENSSDUG00000013280	-	51	30.398	ENSSDUG00000009534	-	67	31.153
ENSSDUG00000013280	-	57	34.821	ENSSDUG00000009439	-	87	35.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013280	-	79	57.380	ENSCSEG00000005462	-	99	50.730	Cynoglossus_semilaevis
ENSSDUG00000013280	-	83	57.686	ENSCVAG00000008425	-	91	57.863	Cyprinodon_variegatus
ENSSDUG00000013280	-	98	51.943	ENSORLG00000024487	-	99	52.584	Oryzias_latipes
ENSSDUG00000013280	-	98	52.270	ENSORLG00020002690	-	89	52.529	Oryzias_latipes_hni
ENSSDUG00000013280	-	98	52.276	ENSORLG00015018912	-	99	52.857	Oryzias_latipes_hsok
ENSSDUG00000013280	-	98	53.272	ENSOMEG00000010494	-	99	52.880	Oryzias_melastigma