EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000013399 (Gene tree)
Gene ID: 111222902
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3749 bases
Position: chrBDQW01000109.1:52239-55987
Accession: 111222902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000018333	PseudoU_synth_2	PF00849.22	1.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000018665	-	1251	XM_022746809	ENSSDUP00000018333	377 (aa)	XP_022602530	UPI000BBE93C8

Gene Model

Click here to download ENSSDUG00000013399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000013399's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000013399	rpusd4	84	50.464	ENSG00000165526	RPUSD4	86	50.303	Homo_sapiens
ENSSDUG00000013399	rpusd4	100	75.907	ENSAPOG00000011024	rpusd4	97	75.907	Acanthochromis_polyacanthus
ENSSDUG00000013399	rpusd4	88	48.657	ENSAMEG00000000127	-	87	48.657	Ailuropoda_melanoleuca
ENSSDUG00000013399	rpusd4	61	50.515	ENSAMEG00000005953	-	93	50.515	Ailuropoda_melanoleuca
ENSSDUG00000013399	rpusd4	85	77.640	ENSACIG00000003533	rpusd4	95	77.640	Amphilophus_citrinellus
ENSSDUG00000013399	rpusd4	100	76.104	ENSAOCG00000015409	rpusd4	96	76.104	Amphiprion_ocellaris
ENSSDUG00000013399	rpusd4	100	76.104	ENSAPEG00000018935	rpusd4	96	76.104	Amphiprion_percula
ENSSDUG00000013399	rpusd4	100	78.442	ENSATEG00000008059	rpusd4	96	78.442	Anabas_testudineus
ENSSDUG00000013399	rpusd4	74	51.773	ENSAPLG00000013250	RPUSD4	99	51.014	Anas_platyrhynchos
ENSSDUG00000013399	rpusd4	84	49.688	ENSACAG00000000189	RPUSD4	86	49.688	Anolis_carolinensis
ENSSDUG00000013399	rpusd4	84	48.916	ENSANAG00000024050	RPUSD4	85	48.916	Aotus_nancymaae
ENSSDUG00000013399	rpusd4	100	74.870	ENSACLG00000020996	rpusd4	99	74.870	Astatotilapia_calliptera
ENSSDUG00000013399	rpusd4	89	60.526	ENSAMXG00000031479	rpusd4	96	60.526	Astyanax_mexicanus
ENSSDUG00000013399	rpusd4	96	46.505	ENSBTAG00000020900	RPUSD4	93	46.505	Bos_taurus
ENSSDUG00000013399	rpusd4	84	49.226	ENSCJAG00000042850	RPUSD4	80	49.226	Callithrix_jacchus
ENSSDUG00000013399	rpusd4	80	52.303	ENSCAFG00000010488	RPUSD4	87	49.851	Canis_familiaris
ENSSDUG00000013399	rpusd4	80	52.303	ENSCAFG00020010621	RPUSD4	87	49.851	Canis_lupus_dingo
ENSSDUG00000013399	rpusd4	84	49.843	ENSCHIG00000009975	RPUSD4	87	48.955	Capra_hircus
ENSSDUG00000013399	rpusd4	97	45.968	ENSTSYG00000008456	RPUSD4	93	45.968	Carlito_syrichta
ENSSDUG00000013399	rpusd4	64	50.413	ENSCAPG00000006040	RPUSD4	92	50.413	Cavia_aperea
ENSSDUG00000013399	rpusd4	85	51.543	ENSCPOG00000014971	RPUSD4	85	51.543	Cavia_porcellus
ENSSDUG00000013399	rpusd4	84	49.226	ENSCCAG00000027838	RPUSD4	85	49.226	Cebus_capucinus
ENSSDUG00000013399	rpusd4	97	45.040	ENSCATG00000041570	RPUSD4	93	45.040	Cercocebus_atys
ENSSDUG00000013399	rpusd4	84	51.393	ENSCLAG00000016553	RPUSD4	84	51.393	Chinchilla_lanigera
ENSSDUG00000013399	rpusd4	84	49.226	ENSCSAG00000002274	RPUSD4	84	49.226	Chlorocebus_sabaeus
ENSSDUG00000013399	rpusd4	71	49.815	ENSCHOG00000010249	RPUSD4	94	49.815	Choloepus_hoffmanni
ENSSDUG00000013399	rpusd4	76	52.249	ENSCPBG00000011175	RPUSD4	99	52.249	Chrysemys_picta_bellii
ENSSDUG00000013399	rpusd4	84	36.364	ENSCSAVG00000000872	-	63	36.364	Ciona_savignyi
ENSSDUG00000013399	rpusd4	84	49.226	ENSCANG00000039684	RPUSD4	85	49.074	Colobus_angolensis_palliatus
ENSSDUG00000013399	rpusd4	84	50.464	ENSCGRG00001024141	Rpusd4	84	50.464	Cricetulus_griseus_chok1gshd
ENSSDUG00000013399	rpusd4	84	50.464	ENSCGRG00000014415	Rpusd4	84	50.464	Cricetulus_griseus_crigri
ENSSDUG00000013399	rpusd4	51	65.625	ENSCSEG00000006462	-	85	65.625	Cynoglossus_semilaevis
ENSSDUG00000013399	rpusd4	96	68.883	ENSCVAG00000000392	rpusd4	99	71.225	Cyprinodon_variegatus
ENSSDUG00000013399	rpusd4	96	69.149	ENSCVAG00000008761	rpusd4	96	69.415	Cyprinodon_variegatus
ENSSDUG00000013399	rpusd4	88	58.754	ENSDARG00000012674	rpusd4	94	58.754	Danio_rerio
ENSSDUG00000013399	rpusd4	84	50.000	ENSDNOG00000020026	RPUSD4	83	50.000	Dasypus_novemcinctus
ENSSDUG00000013399	rpusd4	89	46.628	ENSDORG00000016717	Rpusd4	89	46.921	Dipodomys_ordii
ENSSDUG00000013399	rpusd4	90	48.563	ENSETEG00000013953	RPUSD4	92	48.563	Echinops_telfairi
ENSSDUG00000013399	rpusd4	84	50.155	ENSEASG00005022982	RPUSD4	84	50.155	Equus_asinus_asinus
ENSSDUG00000013399	rpusd4	87	50.000	ENSECAG00000000557	RPUSD4	89	50.000	Equus_caballus
ENSSDUG00000013399	rpusd4	69	55.429	ENSEEUG00000014036	RPUSD4	70	55.429	Erinaceus_europaeus
ENSSDUG00000013399	rpusd4	95	57.784	ENSELUG00000008075	rpusd4	99	57.784	Esox_lucius
ENSSDUG00000013399	rpusd4	80	50.987	ENSFCAG00000029789	RPUSD4	88	48.071	Felis_catus
ENSSDUG00000013399	rpusd4	84	48.287	ENSFALG00000005171	RPUSD4	94	48.287	Ficedula_albicollis
ENSSDUG00000013399	rpusd4	88	48.961	ENSFDAG00000014307	RPUSD4	89	48.961	Fukomys_damarensis
ENSSDUG00000013399	rpusd4	94	73.497	ENSFHEG00000004329	rpusd4	95	73.497	Fundulus_heteroclitus
ENSSDUG00000013399	rpusd4	84	64.669	ENSGMOG00000017726	rpusd4	97	63.497	Gadus_morhua
ENSSDUG00000013399	rpusd4	75	52.281	ENSGALG00000024326	RPUSD4	87	50.784	Gallus_gallus
ENSSDUG00000013399	rpusd4	100	67.347	ENSGAFG00000021559	rpusd4	99	67.347	Gambusia_affinis
ENSSDUG00000013399	rpusd4	88	78.614	ENSGACG00000001657	rpusd4	97	82.310	Gasterosteus_aculeatus
ENSSDUG00000013399	rpusd4	91	48.991	ENSGAGG00000000132	RPUSD4	96	48.991	Gopherus_agassizii
ENSSDUG00000013399	rpusd4	84	51.393	ENSGGOG00000016494	RPUSD4	86	51.212	Gorilla_gorilla
ENSSDUG00000013399	rpusd4	100	74.611	ENSHBUG00000022838	rpusd4	99	74.611	Haplochromis_burtoni
ENSSDUG00000013399	rpusd4	88	48.665	ENSHGLG00000002285	RPUSD4	88	48.665	Heterocephalus_glaber_female
ENSSDUG00000013399	rpusd4	88	48.665	ENSHGLG00100006385	RPUSD4	88	48.665	Heterocephalus_glaber_male
ENSSDUG00000013399	rpusd4	94	71.271	ENSHCOG00000006612	rpusd4	93	71.271	Hippocampus_comes
ENSSDUG00000013399	rpusd4	85	59.385	ENSIPUG00000023879	rusd4	84	59.385	Ictalurus_punctatus
ENSSDUG00000013399	rpusd4	88	49.405	ENSSTOG00000025280	RPUSD4	91	49.405	Ictidomys_tridecemlineatus
ENSSDUG00000013399	rpusd4	84	50.943	ENSJJAG00000018673	Rpusd4	85	50.943	Jaculus_jaculus
ENSSDUG00000013399	rpusd4	100	69.554	ENSKMAG00000021805	rpusd4	99	69.554	Kryptolebias_marmoratus
ENSSDUG00000013399	rpusd4	100	71.253	ENSLBEG00000020394	rpusd4	93	81.325	Labrus_bergylta
ENSSDUG00000013399	rpusd4	85	52.439	ENSLACG00000011028	RPUSD4	90	49.862	Latimeria_chalumnae
ENSSDUG00000013399	rpusd4	87	45.238	ENSLOCG00000003124	rpusd4	88	45.238	Lepisosteus_oculatus
ENSSDUG00000013399	rpusd4	86	49.398	ENSLAFG00000005211	RPUSD4	99	42.857	Loxodonta_africana
ENSSDUG00000013399	rpusd4	97	45.576	ENSMFAG00000039513	RPUSD4	93	45.576	Macaca_fascicularis
ENSSDUG00000013399	rpusd4	97	45.308	ENSMMUG00000007933	RPUSD4	93	45.308	Macaca_mulatta
ENSSDUG00000013399	rpusd4	97	45.845	ENSMNEG00000027414	RPUSD4	93	45.845	Macaca_nemestrina
ENSSDUG00000013399	rpusd4	84	49.226	ENSMLEG00000042461	RPUSD4	84	49.226	Mandrillus_leucophaeus
ENSSDUG00000013399	rpusd4	92	78.611	ENSMAMG00000023839	rpusd4	94	78.611	Mastacembelus_armatus
ENSSDUG00000013399	rpusd4	100	74.870	ENSMZEG00005011999	rpusd4	99	74.870	Maylandia_zebra
ENSSDUG00000013399	rpusd4	74	51.408	ENSMGAG00000000840	RPUSD4	96	48.276	Meleagris_gallopavo
ENSSDUG00000013399	rpusd4	89	49.853	ENSMAUG00000010280	Rpusd4	88	49.853	Mesocricetus_auratus
ENSSDUG00000013399	rpusd4	84	51.875	ENSMICG00000015979	RPUSD4	89	53.512	Microcebus_murinus
ENSSDUG00000013399	rpusd4	89	47.507	ENSMOCG00000000661	Rpusd4	89	47.507	Microtus_ochrogaster
ENSSDUG00000013399	rpusd4	82	80.386	ENSMMOG00000021731	rpusd4	93	80.386	Mola_mola
ENSSDUG00000013399	rpusd4	81	51.768	ENSMODG00000004521	RPUSD4	79	51.768	Monodelphis_domestica
ENSSDUG00000013399	rpusd4	81	83.713	ENSMALG00000005839	rpusd4	96	81.388	Monopterus_albus
ENSSDUG00000013399	rpusd4	89	48.387	MGP_CAROLIEiJ_G0031954	Rpusd4	89	48.387	Mus_caroli
ENSSDUG00000013399	rpusd4	89	48.680	ENSMUSG00000032044	Rpusd4	89	48.680	Mus_musculus
ENSSDUG00000013399	rpusd4	89	48.387	MGP_PahariEiJ_G0014819	Rpusd4	89	48.387	Mus_pahari
ENSSDUG00000013399	rpusd4	89	48.387	MGP_SPRETEiJ_G0033078	Rpusd4	89	48.387	Mus_spretus
ENSSDUG00000013399	rpusd4	89	48.680	ENSMPUG00000006608	RPUSD4	89	48.680	Mustela_putorius_furo
ENSSDUG00000013399	rpusd4	68	49.225	ENSMLUG00000029348	-	99	49.225	Myotis_lucifugus
ENSSDUG00000013399	rpusd4	88	49.408	ENSMLUG00000017328	-	87	49.408	Myotis_lucifugus
ENSSDUG00000013399	rpusd4	85	52.599	ENSNGAG00000020847	Rpusd4	85	52.599	Nannospalax_galili
ENSSDUG00000013399	rpusd4	86	81.231	ENSNBRG00000005207	rpusd4	95	81.231	Neolamprologus_brichardi
ENSSDUG00000013399	rpusd4	97	46.070	ENSNLEG00000007465	RPUSD4	93	46.070	Nomascus_leucogenys
ENSSDUG00000013399	rpusd4	84	51.250	ENSMEUG00000004370	RPUSD4	84	51.250	Notamacropus_eugenii
ENSSDUG00000013399	rpusd4	88	48.083	ENSODEG00000004577	RPUSD4	88	48.083	Octodon_degus
ENSSDUG00000013399	rpusd4	100	75.130	ENSONIG00000018879	rpusd4	99	75.130	Oreochromis_niloticus
ENSSDUG00000013399	rpusd4	77	47.826	ENSOANG00000007247	RPUSD4	94	47.987	Ornithorhynchus_anatinus
ENSSDUG00000013399	rpusd4	88	49.852	ENSOCUG00000017039	RPUSD4	88	49.852	Oryctolagus_cuniculus
ENSSDUG00000013399	rpusd4	94	68.493	ENSORLG00000002750	rpusd4	90	73.065	Oryzias_latipes
ENSSDUG00000013399	rpusd4	92	69.382	ENSORLG00020002044	rpusd4	89	69.382	Oryzias_latipes_hni
ENSSDUG00000013399	rpusd4	92	68.908	ENSORLG00015020034	rpusd4	91	66.935	Oryzias_latipes_hsok
ENSSDUG00000013399	rpusd4	95	69.837	ENSOMEG00000004861	rpusd4	91	69.837	Oryzias_melastigma
ENSSDUG00000013399	rpusd4	83	51.582	ENSOGAG00000008922	RPUSD4	87	50.149	Otolemur_garnettii
ENSSDUG00000013399	rpusd4	84	49.843	ENSOARG00000012238	RPUSD4	87	48.955	Ovis_aries
ENSSDUG00000013399	rpusd4	84	50.464	ENSPPAG00000042883	RPUSD4	80	50.303	Pan_paniscus
ENSSDUG00000013399	rpusd4	85	49.235	ENSPPRG00000003081	RPUSD4	85	49.235	Panthera_pardus
ENSSDUG00000013399	rpusd4	85	49.235	ENSPTIG00000012059	RPUSD4	86	50.987	Panthera_tigris_altaica
ENSSDUG00000013399	rpusd4	84	50.464	ENSPTRG00000004454	RPUSD4	86	50.303	Pan_troglodytes
ENSSDUG00000013399	rpusd4	97	45.576	ENSPANG00000015040	RPUSD4	93	45.576	Papio_anubis
ENSSDUG00000013399	rpusd4	97	53.600	ENSPKIG00000023986	rpusd4	96	53.600	Paramormyrops_kingsleyae
ENSSDUG00000013399	rpusd4	78	53.512	ENSPSIG00000014268	RPUSD4	93	53.512	Pelodiscus_sinensis
ENSSDUG00000013399	rpusd4	88	71.856	ENSPMGG00000002806	rpusd4	93	70.482	Periophthalmus_magnuspinnatus
ENSSDUG00000013399	rpusd4	89	42.522	ENSPEMG00000000278	Rpusd4	88	42.522	Peromyscus_maniculatus_bairdii
ENSSDUG00000013399	rpusd4	78	40.184	ENSPMAG00000008183	rpusd4	94	40.184	Petromyzon_marinus
ENSSDUG00000013399	rpusd4	84	51.562	ENSPCIG00000010212	RPUSD4	86	51.562	Phascolarctos_cinereus
ENSSDUG00000013399	rpusd4	95	69.415	ENSPFOG00000019030	rpusd4	99	69.415	Poecilia_formosa
ENSSDUG00000013399	rpusd4	100	67.939	ENSPLAG00000016848	rpusd4	99	67.939	Poecilia_latipinna
ENSSDUG00000013399	rpusd4	100	66.921	ENSPMEG00000017534	rpusd4	99	66.921	Poecilia_mexicana
ENSSDUG00000013399	rpusd4	97	67.895	ENSPREG00000005689	rpusd4	97	67.895	Poecilia_reticulata
ENSSDUG00000013399	rpusd4	84	49.226	ENSPPYG00000004043	RPUSD4	84	49.226	Pongo_abelii
ENSSDUG00000013399	rpusd4	65	52.857	ENSPCAG00000000753	RPUSD4	67	52.857	Procavia_capensis
ENSSDUG00000013399	rpusd4	88	47.305	ENSPCOG00000020694	RPUSD4	87	47.305	Propithecus_coquereli
ENSSDUG00000013399	rpusd4	84	50.000	ENSPVAG00000000988	RPUSD4	84	50.000	Pteropus_vampyrus
ENSSDUG00000013399	rpusd4	100	74.352	ENSPNYG00000009652	rpusd4	99	74.352	Pundamilia_nyererei
ENSSDUG00000013399	rpusd4	97	57.724	ENSPNAG00000012264	rpusd4	97	57.724	Pygocentrus_nattereri
ENSSDUG00000013399	rpusd4	89	49.560	ENSRNOG00000011567	Rpusd4	89	49.560	Rattus_norvegicus
ENSSDUG00000013399	rpusd4	96	45.676	ENSRBIG00000034842	RPUSD4	94	45.187	Rhinopithecus_bieti
ENSSDUG00000013399	rpusd4	96	45.676	ENSRROG00000039753	RPUSD4	94	45.187	Rhinopithecus_roxellana
ENSSDUG00000013399	rpusd4	89	47.507	ENSSBOG00000030413	RPUSD4	90	47.507	Saimiri_boliviensis_boliviensis
ENSSDUG00000013399	rpusd4	79	50.836	ENSSHAG00000008304	RPUSD4	97	50.836	Sarcophilus_harrisii
ENSSDUG00000013399	rpusd4	85	59.146	ENSSFOG00015006203	rpusd4	88	59.451	Scleropages_formosus
ENSSDUG00000013399	rpusd4	100	80.902	ENSSMAG00000020978	rpusd4	99	80.902	Scophthalmus_maximus
ENSSDUG00000013399	rpusd4	100	98.674	ENSSLDG00000023507	rpusd4	100	98.674	Seriola_lalandi_dorsalis
ENSSDUG00000013399	rpusd4	78	53.691	ENSSPUG00000001401	RPUSD4	98	48.315	Sphenodon_punctatus
ENSSDUG00000013399	rpusd4	99	72.846	ENSSPAG00000012163	rpusd4	98	72.846	Stegastes_partitus
ENSSDUG00000013399	rpusd4	84	48.758	ENSSSCG00000015233	RPUSD4	84	48.758	Sus_scrofa
ENSSDUG00000013399	rpusd4	79	51.505	ENSTGUG00000000773	RPUSD4	99	51.505	Taeniopygia_guttata
ENSSDUG00000013399	rpusd4	99	69.737	ENSTRUG00000012283	rpusd4	98	69.737	Takifugu_rubripes
ENSSDUG00000013399	rpusd4	97	69.519	ENSTNIG00000014676	rpusd4	96	69.519	Tetraodon_nigroviridis
ENSSDUG00000013399	rpusd4	84	50.157	ENSTTRG00000001555	RPUSD4	84	50.157	Tursiops_truncatus
ENSSDUG00000013399	rpusd4	96	46.883	ENSUMAG00000002219	RPUSD4	93	46.883	Ursus_maritimus
ENSSDUG00000013399	rpusd4	58	48.416	ENSVPAG00000001066	RPUSD4	81	48.416	Vicugna_pacos
ENSSDUG00000013399	rpusd4	80	52.303	ENSVVUG00000020101	RPUSD4	87	49.851	Vulpes_vulpes
ENSSDUG00000013399	rpusd4	100	67.857	ENSXCOG00000004676	rpusd4	99	67.857	Xiphophorus_couchianus
ENSSDUG00000013399	rpusd4	100	67.857	ENSXMAG00000023351	rpusd4	99	67.857	Xiphophorus_maculatus